Uncovering of Classical Swine Fever Virus adaptive response to vaccination by Next Generation Sequencing

Ulrik Fahnøe, Richard Orton, Dirk Höper, Martin Beer, Thomas Bruun Rasmussen

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    Abstract

    Next Generation Sequencing (NGS) has rapidly become the preferred technology in nucleotide sequencing, and can be applied to unravel molecular adaptation of RNA viruses such as Classical Swine Fever Virus (CSFV). However, the detection of low frequency variants within viral populations by NGS is affected by errors introduced during sample preparation and sequencing, and so far no definitive solution to this problem has been presented.


    Original languageEnglish
    Publication date2014
    Publication statusPublished - 2014
    Event8th Annual Meeting of Epizone: Primed for tomorrow - DGI Byen, Copenhagen, Denmark
    Duration: 23 Sep 201425 Sep 2014
    Conference number: 8
    http://www.epizone-eu.net/en/Home/Annual-meeting.htm

    Conference

    Conference8th Annual Meeting of Epizone
    Number8
    LocationDGI Byen
    CountryDenmark
    CityCopenhagen
    Period23/09/201425/09/2014
    Internet address

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