Timing Analysis of Genetic Logic Circuits using D-VASim

Hasan Baig, Jan Madsen

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Abstract

A genetic logic circuit is a gene regulator network implemented by re-engineering the DNA of a cell, in order to controlgene expression or metabolic pathways, through a logic combination of external signals, such as chemicals or proteins. As for electroniclogic circuits, timing and propagation delay analysis may play a very significant role in the designing of genetic logic circuits. In thisdemonstration, we present the capability of D-VASim (Dynamic Virtual Analyzer and Simulator) to perform the timing and propagationdelay analysis of genetic logic circuits. Using D-VASim, the timing and propagation delay analysis of single as well as cascaded geneticlogic circuits can be performed. D-VASim allows user to change the circuit parameters during runtime simulation to observe its effectson circuit’s timing behavior. The results obtained from D-VASim can be used not only to characterize the timing behavior of geneticlogic circuits but also to analyze the timing constraints of cascaded genetic logic circuits.
Original languageEnglish
Publication date2016
Number of pages1
Publication statusPublished - 2016
Event19th Conference and Exhibition on Design, Automation and Test in Europe Conference and Exhibition (DATE 2016) - Dresden, Germany
Duration: 14 Mar 201618 Mar 2016
Conference number: 19
https://www.date-conference.com/

Conference

Conference19th Conference and Exhibition on Design, Automation and Test in Europe Conference and Exhibition (DATE 2016)
Number19
CountryGermany
CityDresden
Period14/03/201618/03/2016
Internet address

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