The association of heavy and light chain variable domains in antibodies: implications for antigen specificity

Anna Chailyan, Paolo Marcatili, Anna Tramontano

Research output: Contribution to journalJournal articleResearchpeer-review

Abstract

The antigen‐binding site of immunoglobulins is formed by six regions, three from the light and three from the heavy chain variable domains, which, on association of the two chains, form the conventional antigen‐binding site of the antibody. The mode of interaction between the heavy and light chain variable domains affects the relative position of the antigen‐binding loops and therefore has an effect on the overall conformation of the binding site. In this article, we analyze the structure of the interface between the heavy and light chain variable domains and show that there are essentially two different modes for their interaction that can be identified by the presence of key amino acids in specific positions of the antibody sequences. We also show that the different packing modes are related to the type of recognized antigen.
Original languageEnglish
JournalF E B S Journal
Volume278
Issue number16
Pages (from-to)2858-2866
ISSN1742-464x
DOIs
Publication statusPublished - 2011
Externally publishedYes

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