O-GLYCBASE version 3.0: a revised database of O-glycosylated proteins

Jan Hansen, Ole Lund, Jette Nilsson, Kristoffer Rapacki, Søren Brunak

Research output: Contribution to journalJournal articleResearchpeer-review

Abstract

O-GLYCBASE is a revised database of information on glycoproteins and their O-linked glycosylation sites. Entries are compiled and revised from the literature, and from the sequence databases. Entries include informations about species, sequence, glycosylation sites and glycan type and is fully cross-referenced. Compared to version 2.0 the number of entries has increased by 20%. Sequence logos displaying the acceptor specificity patterns for the GalNAc, mannose and GlcNAc transferases are shown. The O-GLYCBASE database is available through the WWW at http://www.cbs.dtu.dk/databases/OGLYCBASE/
Original languageEnglish
JournalNucleic Acids Research
Volume26
Issue number1
Pages (from-to)387-389
ISSN0305-1048
Publication statusPublished - 1998

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