Novel DNA barcodes for detection, idenfication and tracking of stachybotrys and chaetomium species

Anna Malgorzata Lewinska; Jakob Blæsbjerg Hoof; Ruut Hannele Peuhkuri; Carsten Rode; Birgitte Andersen

Novel DNA barcodes for detection, idenfication and tracking of stachybotrys and chaetomium species

Anna Malgorzata Lewinska, Jakob Blæsbjerg Hoof, Ruut Hannele Peuhkuri, Carsten Rode, Birgitte Andersen

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

Abstract

Detection and identification of indoor fungi in water-damaged buildings is crucial for preventi and control of fungal growth. This study focuses on a molecular method called DNA barcoding. evaluates commonly used sequences in DNA barcoding for fungal species identification Chaetomium and Stachybotrys. The existing DNA barcodes: ITS, SSU, LSU, B-TUB, CMD, RP and TEF-1α do not give satisfying species resolution to be considered as DNA barcodes for the two genera. Therefore, novel barcodes for them are needed. Barcode potentials, such as HOG1 a NAHA, were identified using bioinformatics and are being evaluated in laboratory.

Original language	English
Title of host publication	Proceedings of Indoor Air 2014
Number of pages	8
Publisher	International Society of Indoor Air Quality and Climate
Publication date	2014
Pages	281-288
Publication status	Published - 2014
Event	13th International Conference on Indoor Air Quality and Climate - University of Hong Kong, Hong Kong, Hong Kong Duration: 7 Jul 2014 → 12 Jul 2014 Conference number: 13 http://www.indoorair2014.org/

Conference

Conference	13th International Conference on Indoor Air Quality and Climate
Number	13
Location	University of Hong Kong
Country/Territory	Hong Kong
City	Hong Kong
Period	07/07/2014 → 12/07/2014
Internet address	http://www.indoorair2014.org/

Keywords

DNA

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title = "Novel DNA barcodes for detection, idenfication and tracking of stachybotrys and chaetomium species",

abstract = "Detection and identification of indoor fungi in water-damaged buildings is crucial for preventi and control of fungal growth. This study focuses on a molecular method called DNA barcoding. evaluates commonly used sequences in DNA barcoding for fungal species identification Chaetomium and Stachybotrys. The existing DNA barcodes: ITS, SSU, LSU, B-TUB, CMD, RP and TEF-1α do not give satisfying species resolution to be considered as DNA barcodes for the two genera. Therefore, novel barcodes for them are needed. Barcode potentials, such as HOG1 a NAHA, were identified using bioinformatics and are being evaluated in laboratory.",

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year = "2014",

language = "English",

pages = "281--288",

booktitle = "Proceedings of Indoor Air 2014",

publisher = "International Society of Indoor Air Quality and Climate",

note = "13th International Conference on Indoor Air Quality and Climate ; Conference date: 07-07-2014 Through 12-07-2014",

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Novel DNA barcodes for detection, idenfication and tracking of stachybotrys and chaetomium species. / Lewinska, Anna Malgorzata; Hoof, Jakob Blæsbjerg; Peuhkuri, Ruut Hannele et al.
Proceedings of Indoor Air 2014. International Society of Indoor Air Quality and Climate, 2014. p. 281-288.

Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

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AU - Lewinska, Anna Malgorzata

AU - Hoof, Jakob Blæsbjerg

AU - Peuhkuri, Ruut Hannele

AU - Rode, Carsten

AU - Andersen, Birgitte

N1 - Conference code: 13

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N2 - Detection and identification of indoor fungi in water-damaged buildings is crucial for preventi and control of fungal growth. This study focuses on a molecular method called DNA barcoding. evaluates commonly used sequences in DNA barcoding for fungal species identification Chaetomium and Stachybotrys. The existing DNA barcodes: ITS, SSU, LSU, B-TUB, CMD, RP and TEF-1α do not give satisfying species resolution to be considered as DNA barcodes for the two genera. Therefore, novel barcodes for them are needed. Barcode potentials, such as HOG1 a NAHA, were identified using bioinformatics and are being evaluated in laboratory.

AB - Detection and identification of indoor fungi in water-damaged buildings is crucial for preventi and control of fungal growth. This study focuses on a molecular method called DNA barcoding. evaluates commonly used sequences in DNA barcoding for fungal species identification Chaetomium and Stachybotrys. The existing DNA barcodes: ITS, SSU, LSU, B-TUB, CMD, RP and TEF-1α do not give satisfying species resolution to be considered as DNA barcodes for the two genera. Therefore, novel barcodes for them are needed. Barcode potentials, such as HOG1 a NAHA, were identified using bioinformatics and are being evaluated in laboratory.

KW - DNA

M3 - Article in proceedings

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BT - Proceedings of Indoor Air 2014

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ER -

Novel DNA barcodes for detection, idenfication and tracking of stachybotrys and chaetomium species

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Conference

Keywords

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