Multiplexed CRISPR/Cas9 Genome Editing and Gene Regulation Using Csy4 in Saccharomyces cerevisiae

Raphael Ferreira, Christos Skrekas, Jens Nielsen, Florian David*

*Corresponding author for this work

Research output: Contribution to journalJournal articleResearchpeer-review

Abstract

Clustered regularly interspaced short palindromic repeats (CRISPR) technology has greatly accelerated the field of strain engineering. However, insufficient efforts have been made toward developing robust multiplexing tools in Saccharomyces cerevisiae. Here, we exploit the RNA processing capacity of the bacterial endoribonuclease Csy4 from Pseudomonas aeruginosa, to generate multiple gRNAs from a single transcript for genome editing and gene interference applications in S. cerevisiae. In regards to genome editing, we performed a quadruple deletion of FAA1, FAA4, POX1 and TES1 reaching 96% efficiency out of 24 colonies tested. Then, we used this system to efficiently transcriptionally regulate the three genes, OLE1, HMG1 and ACS1. Thus, we demonstrate that multiplexed genome editing and gene regulation can be performed in a fast and effective manner using Csy4.
Original languageEnglish
JournalA C S Synthetic Biology
Volume7
Issue number1
Pages (from-to)10-15
ISSN2161-5063
DOIs
Publication statusPublished - 2018

Keywords

  • CRISPR
  • Csy4
  • Multiplexing
  • Metabolic engineering
  • Gene editing
  • CRISPRi
  • Gene regulation

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