MatrixPlot: visualizing sequence constraints.

Jan Gorodkin, Hans Henrik Stærfeldt, Ole Lund, Søren Brunak

    Research output: Contribution to journalJournal articleResearchpeer-review

    Abstract

    MatrixPlot: visualizing sequence constraints. Sub-title Abstract Summary : MatrixPlot is a program for making high-quality matrix plots, such as mutual information plots of sequence alignments and distance matrices of sequences with known three-dimensional coordinates. The user can add information about the sequences (e.g. a sequence logo profile) along the edges of the plot, as well as zoom in on any region in the plot. Availability : MatrixPlot can be obtained on request, and can also be accessed online at http://www. cbs.dtu.dk/services/MatrixPlot. Contact : gorodkin@cbs.dtu.dk
    Original languageEnglish
    JournalBioinformatics
    Volume15
    Issue number9
    Pages (from-to)769-70
    ISSN1367-4803
    Publication statusPublished - 1999

    Cite this

    Gorodkin, J., Stærfeldt, H. H., Lund, O., & Brunak, S. (1999). MatrixPlot: visualizing sequence constraints. Bioinformatics, 15(9), 769-70.