Matching Two-dimensional Gel Electrophoresis' Spots

António Dos Anjos, Faroq AL-Tam, Hamid Reza Shahbazkia, Bjarne Kjær Ersbøll

    Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

    Abstract

    This paper describes an approach for matching Two-Dimensional Electrophoresis (2-DE) gels' spots, involving the use of image registration. The number of false positive matches produced by the proposed approach is small, when compared to academic and commercial state-of-the-art approaches. This article contributes to solving one of the greatest bottlenecks in the 2-DE analysis pipeline.
    Original languageEnglish
    Title of host publicationBIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms
    PublisherSciTePress
    Publication date2012
    Pages111-117
    ISBN (Print)978-989-8425-90-4
    Publication statusPublished - 2012
    EventInternational Conference on Bioinformatics Models, Methods and Algorithms (BIOINFORMATICS 2012) - Vilamoura, Algarv, Portugal
    Duration: 1 Feb 20124 Feb 2012
    http://www.bioinformatics.biostec.org/BIOINFORMATICS2012/

    Conference

    ConferenceInternational Conference on Bioinformatics Models, Methods and Algorithms (BIOINFORMATICS 2012)
    CountryPortugal
    CityVilamoura, Algarv
    Period01/02/201204/02/2012
    Internet address

    Keywords

    • Algorithms
    • Electrophoresis
    • Mathematical models
    • Bioinformatics

    Cite this

    Dos Anjos, A., AL-Tam, F., Shahbazkia, H. R., & Ersbøll, B. K. (2012). Matching Two-dimensional Gel Electrophoresis' Spots. In BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms (pp. 111-117). SciTePress.