JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools

Marcel Friedrichs; Alban Shoshi; Piotr Jaroslaw Chmura; Jon Ison; Veit Schwämmle; Falk Schreiber; Ralf Hofestädt; Bjorn Sommer

doi:10.1515/jib-2019-0059

JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools

Marcel Friedrichs^*, Alban Shoshi, Piotr Jaroslaw Chmura, Jon Ison, Veit Schwämmle, Falk Schreiber, Ralf Hofestädt, Bjorn Sommer

^*Corresponding author for this work

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Abstract

JIB.tools 2.0 is a new approach to more closely embed the curation process in the publication process. This website hosts the tools, software applications, databases and workflow systems published in the Journal of Integrative Bioinformatics (JIB). As soon as a new tool-related publication is published in JIB, the tool is posted to JIB.tools and can afterwards be easily transferred to bio.tools, a large information repository of software tools, databases and services for bioinformatics and the life sciences. In this way, an easily-accessible list of tools is provided which were published in JIB a well as status information regarding the underlying service. With newer registries like bio.tools providing these information on a bigger scale, JIB.tools 2.0 closes the gap between journal publications and registry publication. (Reference: https://jib.tools).

Original language	English
Journal	Journal of Integrative Bioinformatics
Volume	16
Issue number	4
Number of pages	8
ISSN	1613-4516
DOIs	https://doi.org/10.1515/jib-2019-0059
Publication status	Published - 2020

Keywords

Computational Biology
Databases as Topic
Collection

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10.1515/jib-2019-0059

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title = "JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools",

abstract = "JIB.tools 2.0 is a new approach to more closely embed the curation process in the publication process. This website hosts the tools, software applications, databases and workflow systems published in the Journal of Integrative Bioinformatics (JIB). As soon as a new tool-related publication is published in JIB, the tool is posted to JIB.tools and can afterwards be easily transferred to bio.tools, a large information repository of software tools, databases and services for bioinformatics and the life sciences. In this way, an easily-accessible list of tools is provided which were published in JIB a well as status information regarding the underlying service. With newer registries like bio.tools providing these information on a bigger scale, JIB.tools 2.0 closes the gap between journal publications and registry publication. (Reference: https://jib.tools).",

keywords = "Computational Biology, Databases as Topic, Collection",

author = "Marcel Friedrichs and Alban Shoshi and Chmura, {Piotr Jaroslaw} and Jon Ison and Veit Schw{\"a}mmle and Falk Schreiber and Ralf Hofest{\"a}dt and Bjorn Sommer",

year = "2020",

doi = "10.1515/jib-2019-0059",

language = "English",

volume = "16",

journal = "Journal of Integrative Bioinformatics",

issn = "1613-4516",

publisher = "IMBIO e.V.",

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T1 - JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools

AU - Friedrichs, Marcel

AU - Shoshi, Alban

AU - Chmura, Piotr Jaroslaw

AU - Ison, Jon

AU - Schwämmle, Veit

AU - Schreiber, Falk

AU - Hofestädt, Ralf

AU - Sommer, Bjorn

PY - 2020

Y1 - 2020

N2 - JIB.tools 2.0 is a new approach to more closely embed the curation process in the publication process. This website hosts the tools, software applications, databases and workflow systems published in the Journal of Integrative Bioinformatics (JIB). As soon as a new tool-related publication is published in JIB, the tool is posted to JIB.tools and can afterwards be easily transferred to bio.tools, a large information repository of software tools, databases and services for bioinformatics and the life sciences. In this way, an easily-accessible list of tools is provided which were published in JIB a well as status information regarding the underlying service. With newer registries like bio.tools providing these information on a bigger scale, JIB.tools 2.0 closes the gap between journal publications and registry publication. (Reference: https://jib.tools).

AB - JIB.tools 2.0 is a new approach to more closely embed the curation process in the publication process. This website hosts the tools, software applications, databases and workflow systems published in the Journal of Integrative Bioinformatics (JIB). As soon as a new tool-related publication is published in JIB, the tool is posted to JIB.tools and can afterwards be easily transferred to bio.tools, a large information repository of software tools, databases and services for bioinformatics and the life sciences. In this way, an easily-accessible list of tools is provided which were published in JIB a well as status information regarding the underlying service. With newer registries like bio.tools providing these information on a bigger scale, JIB.tools 2.0 closes the gap between journal publications and registry publication. (Reference: https://jib.tools).

KW - Computational Biology

KW - Databases as Topic

KW - Collection

U2 - 10.1515/jib-2019-0059

DO - 10.1515/jib-2019-0059

M3 - Journal article

C2 - 31913853

SN - 1613-4516

VL - 16

JO - Journal of Integrative Bioinformatics

JF - Journal of Integrative Bioinformatics

IS - 4

ER -

JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools

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