Abstract
The structures of several enzymatic hydrolysis products of Nothogenia erinacea seaweed xylan, a linear homopolymer with mixed ss-(1 --> 3)/ss-(1 --> 4) linkages, were analysed by physicochemical and biochemical techniques. With the glycoside hydrolase family 10 ss-(1 --> 4)-xylanase from Cryptococcus adeliae, hydrolysis proceeds to a final mixture of products containing a mixed linkage-type triose as a major compound, whereas with the family I I xylanase from Thermomyces lanuginosus this is a mixed linkage tetraose. The Cryptococcus xylanase is shown to be capable of also catalysing the hydrolysis of ss-(1 --> 3) linkages, that is this of a mixed type tetraose intermediary formed, in accordance with the broader substrate specificity of family 10 enzymes. From a partial degradation experiment with the T lanuginosus xylanase, a series of higher mixed oligosaccharides were isolated and identified. The observed oligosaccharide intermediates and splicing pattern indicate an irregular ss-(1 --> 3)/ss-(1 --> 4) linkage distribution within the linear D-xylose polymer. Similar results were obtained with rhodymenan, the seaweed xylan from Palmares palmata . (C) 2004 Elsevier Ltd. All rights reserved.
Original language | English |
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Journal | Carbohydrate Research |
Volume | 339 |
Issue number | 6 |
Pages (from-to) | 1047-1060 |
ISSN | 0008-6215 |
DOIs | |
Publication status | Published - 2004 |
Externally published | Yes |
Keywords
- Ascomycota
- Carbohydrate Sequence
- Cryptococcus
- Endo-1,4-beta Xylanases
- Hydrolysis
- Magnetic Resonance Spectroscopy
- Molecular Sequence Data
- Oligosaccharides
- Polysaccharides
- Protons
- Rhodophyta
- Seaweed
- Substrate Specificity
- Time Factors
- Trifluoroacetic Acid
- Xylans
- E5R8Z4G708 Trifluoroacetic Acid
- EC 3.2.1.8 Endo-1,4-beta Xylanases
- Biochemistry
- Degradation
- Enzymes
- Homopolymerization
- Molecular structure
- Carbohydrates
- fungal enzyme
- glycosidase
- oligosaccharide
- polymer
- rhodymenan
- triose
- unclassified drug
- xylan
- xylan endo 1,3 beta xylosidase
- article
- catalysis
- chemical structure
- Cryptococcus adeliae
- enzyme degradation
- enzyme specificity
- fungal strain
- hydrolysis
- Nothogenia erinacea
- Palmares palmata
- physical chemistry
- priority journal
- protein family
- Rhodymenan palmata
- seaweed
- thermomyces lanuginosus
- Algae, Red
- algae
- Cryptococcus adeliensis
- Erinacea
- Thermomyces
- Thermomyces lanuginosus
- Enzymatic hydrolysis
- Partial degradation
- Physicochemical techniques
- DP, degree of polymerisation
- HPAEC-PAD, High performance anion exchange chromatography with pulsed amperometric detection
- Rhodymenan
- Xylanases
- Xylooligosaccharides
- GLYCOSIDASES
- T
- BIOCHEMISTRY
- CHEMISTRY,
- CATALYTIC PROPERTIES
- PURIFICATION
- FAMILIES
- xylanases
- xylooligosaccharides
- Algae Plantae (Algae, Microorganisms, Nonvascular Plants, Plants) - Rhodophyta [14700] Nothogenia erinacea species
- Fungi Plantae (Fungi, Microorganisms, Nonvascular Plants, Plants) - Fungi Imperfecti or Deuteromycetes [15500] Cryptococcus adeliae species Thermomyces lamuginosus species
- D-xylose polymer
- rhodymenan 9049-36-9
- xylan 9014-63-5 hydrolysis
- xylanases 9025-55-2Q, 9025-57-4Q, 37278-89-0Q family 10, family 11
- 10068, Biochemistry studies - Carbohydrates
- 10802, Enzymes - General and comparative studies: coenzymes
- 51518, Plant physiology - Enzymes
- Biochemistry and Molecular Biophysics
- Enzymology