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Genome-Scale Metabolic Modeling from Yeast to Human Cell Models of Complex Diseases: Latest Advances and Challenges

  • Yu Chen
  • , Gang Li
  • , Jens Nielsen
    • Chalmers University of Technology

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    Abstract

    Genome-scale metabolic models (GEMs) are mathematical models that enable systematic analysis of metabolism. This modeling concept has been applied to study the metabolism of many organisms including the eukaryal model organism, the yeast Saccharomyces cerevisiae, that also serves as an important cell factory for production of fuels and chemicals. With the application of yeast GEMs, our knowledge of metabolism is increasing. Therefore, GEMs have also been used for modeling human cells to study metabolic diseases. Here we introduce the concept of GEMs and provide a protocol for reconstructing GEMs. Besides, we show the historic development of yeast GEMs and their applications. Also, we review human GEMs as well as their uses in the studies of complex diseases.
    Original languageEnglish
    Title of host publicationYeast Systems Biology
    Volume2049
    Publication date2019
    Pages329-345
    DOIs
    Publication statusPublished - 2019
    SeriesMethods in Molecular Biology
    ISSN1064-3745

    UN SDGs

    This output contributes to the following UN Sustainable Development Goals (SDGs)

    1. SDG 3 - Good Health and Well-being
      SDG 3 Good Health and Well-being

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