GenePublisher: automated analysis of DNA microarray data

Steen Knudsen, Christopher Workman, T. Sicheritz-Ponten, Carsten Friis

    Research output: Contribution to journalJournal articleResearchpeer-review

    Abstract

    GenePublisher, a system for automatic analysis of data from DNA microarray experiments, has been implemented with a web interface at http://www.cbs.dtu.dk/services/GenePublisher. Raw data are uploaded to the server together with aspecification of the data. The server performs normalization, statistical analysis and visualization of the data. The results are run against databases of signal transduction pathways, metabolic pathways and promoter sequences in order to extract more information. The results of the entire analysis are summarized in report form and returned to the user.
    Original languageEnglish
    JournalNucleic Acids Research
    Volume31
    Issue number13
    Pages (from-to)3471-3476
    ISSN0305-1048
    Publication statusPublished - 2003

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