GeneDMRs: an R package for Gene-based Differentially Methylated Regions analysis

Xiao Wang, Haja Kadarmideen

Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

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Abstract

Calculating methylation levels using bisulfite sequencing datasets like RRBS within a single gene could help investigate and identify the Gene-based Differentially Methylated Regions (GeneDMRs). Such GeneDMRs are better than single differentially methylated cytosines (DMCs), as it provides an overall gene methylation profiles than single nucleotide level profiles, particularly when the testing known genes prone to epigenetics.
Original languageEnglish
Title of host publicationProceedings of 27th Conference on Intelligent Systems for Molecular Biology and 18th European Conference on Computational Biology
Publication date2019
Publication statusPublished - 2019
EventISMB/ECCB 27th Conference on Intelligent Systems for Molecular Biology and the 18th European Conference on Computational Biology - Basel, Switzerland
Duration: 21 Jul 201925 Jul 2019
https://www.iscb.org/ismbeccb2019

Conference

ConferenceISMB/ECCB 27th Conference on Intelligent Systems for Molecular Biology and the 18th European Conference on Computational Biology
CountrySwitzerland
CityBasel
Period21/07/201925/07/2019
Internet address

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