Skip to main navigation Skip to search Skip to main content

Extracellular respiration is a latent energy metabolism in Escherichia coli

  • Biki Bapi Kundu*
  • , Jayanth Krishnan
  • , Richard Szubin
  • , Arjun Patel
  • , Bernhard O. Palsson
  • , Daniel C. Zielinski*
  • , Caroline M. Ajo-Franklin*
  • *Corresponding author for this work
    • Rice University
    • University of California at San Diego

    Research output: Contribution to journalJournal articleResearchpeer-review

    Abstract

    Diverse microbes utilize redox shuttles to exchange electrons with their environment through mediated extracellular electron transfer (EET), supporting anaerobic survival. Although mediated EET has been leveraged for bioelectrocatalysis for decades, fundamental questions remain about how these redox shuttles are reduced within cells and their role in cellular bioenergetics. Here, we integrate genome editing, electrochemistry, and systems biology to investigate the mechanism and bioenergetics of mediated EET in Escherichia coli, elusive for over two decades. In the absence of alternative electron sinks, the redox cycling of 2-hydroxy-1,4-naphthoquinone (HNQ) via the cytoplasmic nitroreductases NfsB and NfsA enables E. coli respiration on an extracellular electrode. E. coli also exhibits rapid genetic adaptation in the outer membrane porin OmpC, enhancing HNQ-mediated EET levels coupled to growth. This work demonstrates that E. coli can grow independently of classic electron transport chains and fermentation, unveiling a potentially widespread new type of anaerobic energy metabolism.

    Original languageEnglish
    JournalCell
    Volume188
    Issue number11
    Pages (from-to)2907-2924.e23
    ISSN0092-8674
    DOIs
    Publication statusPublished - 2025

    Keywords

    • Adaptive laboratory evolution
    • Anaerobic metabolism
    • Electron shuttles
    • Extracellular electron transfer
    • Flux balance analysis
    • iModulon analysis
    • Nitroreductases
    • Redox homeostasis

    Fingerprint

    Dive into the research topics of 'Extracellular respiration is a latent energy metabolism in Escherichia coli'. Together they form a unique fingerprint.

    Cite this