Estimating animal behaviour and residency from movement data

Martin Wæver Pedersen, Toby Alexander Patterson, Uffe Høgsbro Thygesen, Henrik Madsen

Research output: Contribution to journalJournal articleResearchpeer-review


We present a process-based approach to estimate residency and behavior from uncertain and temporally correlated movement data collected with electronic tags. The estimation problem is formulated as a hidden Markov model (HMM) on a spatial grid in continuous time, which allows straightforward implementation of barriers to movement. Using the grid to explicitly resolve space, location estimation can be supplemented by or based entirely on environmental data (e.g. temperature, daylight). The HMM method can therefore analyze any type of electronic tag data. The HMM computes the joint posterior probability distribution of location and behavior at each point in time. With this, the behavioral state of the animal can be associated to regions in space, thus revealing migration corridors and residence areas. We demonstrate the inferential potential of the method by analyzing satellite-linked archival tag data from a southern bluefin tuna Thunnus maccoyii where longitudinal coordinates inferred from daylight are supplemented by latitudinal information in recorded sea surface temperatures.
Original languageEnglish
Pages (from-to)1281-1290
Publication statusPublished - 2011


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