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Abstract
Many microorganisms produce natural products that form the basis of antimicrobials, antivirals, and other drugs. Genome mining is routinely used to complement screening-based workflows to discover novel natural products. Since 2011, the "antibiotics and secondary metabolite analysis shell-antiSMASH" (https://antismash.secondarymetabolites.org/) has supported researchers in their microbial genome mining tasks, both as a free-to-use web server and as a standalone tool under an OSI-approved open-source license. It is currently the most widely used tool for detecting and characterising biosynthetic gene clusters (BGCs) in bacteria and fungi. Here, we present the updated version 6 of antiSMASH. antiSMASH 6 increases the number of supported cluster types from 58 to 71, displays the modular structure of multi-modular BGCs, adds a new BGC comparison algorithm, allows for the integration of results from other prediction tools, and more effectively detects tailoring enzymes in RiPP clusters.
Original language | English |
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Journal | Nucleic Acids Research |
Number of pages | 7 |
ISSN | 0305-1048 |
DOIs | |
Publication status | Published - 2021 |
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Dive into the research topics of 'antiSMASH 6.0: improving cluster detection and comparison capabilities'. Together they form a unique fingerprint.Activities
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Genome Mining for Natural Products
Weber, T. (Organizer) & Blin, K. (Organizer)
1 Jun 2022 → 3 Jun 2022Activity: Attending an event › Participating in or organising workshops, courses, seminars etc.