Photo of Susanne Karlsmose Pedersen
  • Kemitorvet, 204, 117

    2800 Kgs. Lyngby

    Denmark

20002020

Research output per year

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Research Output

2020

Molecular epidemiology of Salmonella Infantis in Europe: insights into the success of the bacterial host and its parasitic pESI-like megaplasmid

Alba, P., Leekitcharoenphon, P., Carfora, V., Amoruso, R., Cordaro, G., Di Matteo, P., Ianzano, A., Iurescia, M., Diaconu, E. L., Study Group, E-E-A. N., Karlsmose Pedersen, S., Guerra, B., Hendriksen, R. S., Franco, A. & Battisti, A., 2020, (Accepted/In press) In : Microbial Genomics. 12 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
10 Downloads (Pure)
2019

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Hendriksen, R. S., Munk, P., Njage, P. M. K., van Bunnik, B., McNally, L., Lukjancenko, O., Röder, T., Nieuwenhuijse, D., Karlsmose Pedersen, S., Kjeldgaard, J. S., Kaas, R. S., Clausen, P. T. L. C., Vogt, J. K., Leekitcharoenphon, P., van de Schans, M. G. M., Zuidema, T., de Roda Husman, A. M., Rasmussen, S., Petersen, B., Global, S. S. P. C. & 14 others, Amid, C., Cochrane, G., Sicheritz-Pontén, T., Schmitt, H., Alvarez, J. R. M., Aidara-Kane, A., Pamp, S. J., Lund, O., Hald, T., Woolhouse, M., Koopmans, M. P., Vigre, H., Petersen, T. N. & Aarestrup, F. M., 2019, In : Nature Communications. 10, 12 p., 1124.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
358 Downloads (Pure)

Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach

Hendriksen, R. S., Lukjancenko, O., Munk, P., Hjort Hjelmsø, M., Verani, J. R., Ng'eno, E., Bigogo, G., Kiplangat, S., Oumar, T., Bergmark, L., Röder, T., Neatherlin, J. C., Clayton, O., Hald, T., Karlsmose, S., Pamp, S. J., Fields, B., Montgomery, J. M. & Møller Aarestrup, F., 2019, In : P L o S One. 14, 10, 15 p., e0222531.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
82 Downloads (Pure)
Open Access
File
40 Downloads (Pure)
Open Access
File
44 Downloads (Pure)
73 Downloads (Pure)
2018

Final report of ENGAGE ‐ Establishing Next Generation sequencing Ability for Genomic analysis in Europe

Hendriksen, R. S., Karlsmose Pedersen, S., Leekitcharoenphon, P., Malorny, B., Borowiak, M., Battisti, A., Franco, A., Alba, P., Carfora, V., Ricci, A., Mastrorilli, E., Losasso, C., Longo, A., Petrin, S., Barco, L., Wołkowicz, T., Gierczyński, R., Zacharczuk, K., Wolaniuk, N., Wasyl, D. & 13 others, Zajac, M., Wieczorek, K., Pόłtorak, K., Petrovska‐Holmes, L., Davies, R., Tang, Y., Grant, K., Underwood, A., Dallman, T., Painset, A., Hartman, H., Al‐Shabib, A. & Cowley, L., 2018, In : EFSA Supporting Publications. 15, 6, 252 p., 1431E.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
403 Downloads (Pure)

Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes

Rebelo, A. R., Bortolaia, V., Kjeldgaard, J. S., Karlsmose Pedersen, S., Leekitcharoenphon, P., Hansen, I. M., Guerra, B., Malorny, B., Borowiak, M., Hammerl, J. A., Battisti, A., Franco, A., Alba, P., Perrin-Guyomard, A., Granier, S. A., de Frutos, C., Escobar, Malhotra-Kumar, S., Villa, L., Carattoli, A. & 1 others, Hendriksen, R. S., 8 Feb 2018, In : Eurosurveillance. 23, 6, 11 p., 17-00672.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
367 Downloads (Pure)

Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System participants in the identification and susceptibility testing of thermo-tolerant Campylobacter spp. from 2003-2012

Karlsmose Pedersen, S., Wagenaar, J. A., Vigre, H., Roer, L., Mikoleit, M., Aidara-Kane, A., Cawthorne, A. L., Aarestrup, F. M. & Hendriksen, R. S., 2018, In : Journal of Clinical Microbiology. 56, 11, 9 p., e01066-18.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
278 Downloads (Pure)

The 22nd EURL-AR Proficiency Test - Enterococci, Staphylococci and E. coli 2017

Bortolaia, V., Karlsmose Pedersen, S., Hendriksen, R. S. & Aarestrup, F. M., 2018, kgs. Lyngby, Denmark: Technical University of Denmark. 20 p.

Research output: Book/ReportReportCommissioned

Open Access
File
65 Downloads (Pure)

The 23rd EURL-AR Proficiency Test Salmonella, Campylobacter and genotypic characterisation 2017

Karlsmose Pedersen, S., Hendriksen, R. S. & Bortolaia, V., 2018, Kgs. Lyngby, Denmark: Technical University of Denmark. 17 p.

Research output: Book/ReportReportCommissioned

Open Access
File
91 Downloads (Pure)
47 Downloads (Pure)
2017
Open Access
File
78 Downloads (Pure)
Open Access
File
61 Downloads (Pure)
2016
81 Downloads (Pure)

The proficiency test (pilot) report of the global microbial identifier (GMI) initiative, year 2014

Hendriksen, R. S., Karlsmose Pedersen, S., Larsen, M. V., Neubert Pedersen, J., Lukjancenko, O., Kaas, R. S., Leekitcharoenphon, P., Bergmark, L., Hansen, I. M., Sintchenko, V., Wolfgang, W. J., Westh, H. T., Moran-Gilad, J., Hsiao, W., Cuesta, I., Barrera, J., Zaballos, A., Olson, N. D., Beck, B., Underwood, A. & 3 others, Aarestrup, F. M., Strain, E. & Pettengill, J., 2016, Kgs. Lyngby: National Food Institute, Technical University of Denmark. 23 p.

Research output: Book/ReportReportResearchpeer-review

Open Access
File
189 Downloads (Pure)
2015

Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities

Moran-Gilad, J., Sintchenko, V., Karlsmose Pedersen, S., Wolfgang, W. J., Pettengill, J., Strain, E. & Hendriksen, R. S., 2015, In : B M C Infectious Diseases. 15, 10 p., 174.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
552 Downloads (Pure)

Proficiency Testing for Bacterial Whole Genome Sequencing: An End-User Survey of Current Capabilities, Requirements and Priorities

Moran-Gilad, J., Sintchenko, V., Karlsmose Pedersen, S., Wolfgang, W. J., Pettengill, J. & Hendriksen, R. S., 2015, 32 p.

Research output: Book/ReportReportResearch

Open Access
File
182 Downloads (Pure)
74 Downloads (Pure)
102 Downloads (Pure)
Open Access
File
139 Downloads (Pure)
Open Access
File
72 Downloads (Pure)

The External Quality Assurance System of the WHO Global Foodborne Infections Network, 2013

Hendriksen, R. S., Karlsmose, S., Jensen, A. B. & Aarestrup, F. M., 2014, Kgs. Lyngby: DTU Food. 30 p.

Research output: Book/ReportReportResearchpeer-review

Open Access
File
89 Downloads (Pure)
101 Downloads (Pure)

External quality assurance system (EQAS) for identification of mastitis pathogens in Denmark from 2006 to 2011

Karlsmose, S., Kunstmann, L., Rundsten, C. F., Krogh, K., Larsen, H. K. D., Jensen, A. B., Aarestrup, F. M. & Hendriksen, R. S., 2013, In : Preventive Veterinary Medicine. 109, 3-4, p. 271-277

Research output: Contribution to journalJournal articleResearchpeer-review

Occurrence of Listeria spp. in retail meat and dairy products in the area of Addis Ababa, Ethiopia.

Derra, F. A., Karlsmose, S., Monga, D. P., Mache, A., Svendsen, C. A., Felix, B., Granier, S. A., Geyid, A., Taye, G. & Hendriksen, R. S., 2013, In : Foodborne Pathogens and Disease. 10, 6, p. 577-579

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
550 Downloads (Pure)

Ringtest för identificering och resistensbestämning av mastitpatogener

Karlsmose, S., Hendriksen, R. S. & Dahl Larsen, H. K., 2013, In : Svensk Veterinaertidning. 8-9, p. 15-17

Research output: Contribution to journalJournal articleResearchpeer-review

140 Downloads (Pure)
Open Access
File
88 Downloads (Pure)

The External Quality Assurance System of the WHO Global Foodborne Infections Network, 2011

Hendriksen, R. S., Karlsmose, S., Jensen, A. B. & Aarestrup, F. M., 2012, Kgs. Lyngby: DTU Food. 47 p.

Research output: Book/ReportReportResearchpeer-review

Open Access
File
125 Downloads (Pure)
78 Downloads (Pure)
2011

Establishing Streptomycin Epidemiological Cut-Off Values for Salmonella and Escherichia coli

Migura, L. G., Sunde, M., Karlsmose, S., Veldman, K., Schroeter, A., Guerra, B., Granier, S. A., Perrin-Guyomard, A., Gicquel-Bruneau, M., Franco, A., Englund, S., Teale, C., Heiska, H., Clemente, L., Boerlin, P., Moreno, M. A., Daignault, D., Mevius, D., Hendriksen, R. S. & Aarestrup, F. M., 2011, In : Microbial Drug Resistance. 18, 1, p. 88-93

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
915 Downloads (Pure)

Global Food Safety Portal: A visualisation tool to promote new research into data relations and assess trends, patterns and risk factors for foodborne pathogens

Coutinho Calado Domingues, A. R., Vieira, A., Hendriksen, R. S., Karlsmose, S., Wong, D. L-F. & Aarestrup, F. M., 2011.

Research output: Contribution to conferencePosterResearch

Open Access
File
75 Downloads (Pure)
Open Access
File
2687 Downloads (Pure)

Mechanisms of Antimicrobial Resistance

Karlsmose, S., 2011

Research output: Non-textual formSound/Visual production (digital)Research

Open Access
File
101 Downloads (Pure)

Monitoring of antimicrobial resistance – a national example and EURL-AR experience

Karlsmose, S., 2011

Research output: Non-textual formSound/Visual production (digital)Research

Open Access
File
101 Downloads (Pure)