Publications per year
Publications per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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ResFinder - an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes
Florensa, A. F., Kaas, R. S., Clausen, P. T. L. C., Aytan-Aktug, D. & Aarestrup, F. M., 2022, In: Microbial Genomics. 8, 1, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile159 Downloads (Pure) -
Standard Sample Storage Conditions Have an Impact on Inferred Microbiome Composition and Antimicrobial Resistance Patterns
Poulsen, C. S., Kaas, R. S., Aarestrup, F. M. & Pamp, S. J., 2021, In: Microbiology Spectrum. 9, 2, 19 p., e0138721.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile31 Downloads (Pure) -
Addressing Learning Needs on the Use of Metagenomics in Antimicrobial Resistance Surveillance
Ribeiro Duarte, A. S., Stärk, K. D. C., Munk, P., Leekitcharoenphon, P., Bossers, A., Luiken, R., Sarrazin, S., Lukjancenko, O., Pamp, S. J., Bortolaia, V., Nissen, J. N., Kirstahler, P., Van Gompel, L., Poulsen, C. S., Kaas, R. S., Hellmér, M., Hansen, R. B., Gomez, V. M. & Hald, T., 2020, In: Frontiers in Public Health. 8, 10 p., 38.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile155 Downloads (Pure) -
Four European Salmonella Typhimurium datasets collected to develop WGS-based source attribution methods
Munck, N. S. M., Leekitcharoenphon, P., Litrup, E., Kaas, R. S., Meinen, A., Guillier, L., Tang, Y., Malorny, B., Palma, F., Borowiak, M., Gourmelon, M., Simon, S., Banerji, S., Petrovska, L., Dallman, T. J. & Hald, T., 2020, In: Scientific Data. 7, 1, 12 p., 75.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile92 Downloads (Pure) -
ResFinder 4.0 for predictions of phenotypes from genotypes
Bortolaia, V., Kaas, R. S., Ruppe, E., Roberts, M. C., Schwarz, S., Cattoir, V., Philippon, A., Allesoe, R. L., Rebelo, A. R., Florensa, A. F., Fagelhauer, L., Chakraborty, T., Neumann, B., Werner, G., Bender, J. K., Stingl, K., Nguyen, M., Coppens, J., Xavier, B. B., Malhotra-Kumar, S., & 15 others, 2020, In: Journal of Antimicrobial Chemotherapy. 75, 12, p. 3491-3500 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile50 Downloads (Pure)
Projects
- 5 Finished
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Udvikling af tids-effektiv DNA-baseret metode til Salmonella serotypning
Aarestrup, F. M., Kjeldgaard, J. S., Seyfarth, A. M., Otani, S., Kaas, R. S. & Skiby, J. E.
01/01/2019 → 31/12/2019
Project: Research
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Evergreen methods for phylogeny
Szarvas, J., Aarestrup, F. M., Kaas, R. S., Hasman, H., Timme, R. E. & Lund, O.
01/08/2017 → 18/03/2021
Project: PhD
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Typing and pheno typing based on direct sequencing of samples
Clausen, P. T. L. C., Aarestrup, F. M., Kaas, R. S., Krogh, A. S., Phillippy, A. & Lund, O.
01/07/2017 → 15/09/2020
Project: PhD
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Detection of Pathogens and Antimicrobial Resistance in Microbiomes
Poulsen, C. S., Aarestrup, F. M., Kaas, R. S., Vigre, H., Gilbert, M. T. P., Pamp, S. J. & Höper, D.
01/10/2015 → 14/08/2019
Project: PhD
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Whole Genome Epidemilogical Typing Of Escherichia Coli
Kaas, R. S., Aarestrup, F. M., Ussery, D., Hendriksen, R. S., Krogh, A. S., Underwood, A. & Lund, O.
Technical University of Denmark
01/11/2010 → 26/01/2015
Project: PhD