Peter Wad Sackett

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Phone21798788
Emailpwsadtudk
Websitehttp://www.healthtech.dtu.dk

Henrik Dams Allé, 204, 248
2800 Kgs. Lyngby
Denmark

9 Journal article
1 Conference abstract in journal

10 results

2023
Benchmarking software tools for trimming adapters and merging next-generation sequencing data for ancient DNA
Lien, A., Legori, L. P., Kraft, L., Sackett, P. W. & Renaud, G., 2023, In: Frontiers in Bioinformatics. 3, 18 p., 1260486.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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41 Downloads (Pure)
euka: Robust tetrapodic and arthropodic taxa detection from modern and ancient environmental DNA using pangenomic reference graphs
Vogel, N. A., Rubin, J. D., Swartz, M., Vlieghe, J., Sackett, P. W., Pedersen, A. G., Pedersen, M. W. & Renaud, G., 2023, In: Methods in Ecology and Evolution. 14, 11, p. 2717-2727
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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HaploCart: Human mtDNA haplogroup classification using a pangenomic reference graph
Rubin, J. D., Vogel, N. A., Gopalakrishnan, S., Sackett, P. W. & Renaud, G., 2023, In: PLOS Computational Biology. 19, 6, 27 p., e1011148.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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17 Downloads (Pure)
NetAllergen, a random forest model integrating MHC-II presentation propensity for improved allergenicity prediction
Li, Y., Sackett, P. W., Nielsen, M. & Barra, C., 2023, In: Bioinformatics Advances. 3, 1, 10 p., vbad151.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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37 Downloads (Pure)
RosettaDDGPrediction for high-throughput mutational scans: From stability to binding
Sora, V., Laspiur, A. O., Degn, K., Arnaudi, M., Utichi, M., Beltrame, L., De Menezes, D., Orlandi, M., Stoltze, U. K., Rigina, O., Sackett, P. W., Wadt, K., Schmiegelow, K., Tiberti, M. & Papaleo, E., 2023, In: Protein Science. 32, 1, 25 p., e4527.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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321 Downloads (Pure)
2020
Nationwide germline whole genome sequencing of 198 consecutive pediatric cancer patients reveals a high frequency of cancer prone syndromes
Byrjalsen, A., Hansen, T. V. O., Stoltze, U. K., Mehrjouy, M. M., Barnkob, N. M., Hjalgrim, L. L., Mathiasen, R., Lautrup, C. K., Gregersen, P. A., Hasle, H., Wehner, P. S., Tuckuviene, R., Sackett, P. W., Laspiur, A. O., Rossing, M., Marvig, R. L., Tommerup, N., Olsen, T. E., Scheie, D. & Gupta, R. & 3 others, Gerdes, A.-M., Schmiegelow, K. & Wadt, K., 2020, In: PLOS Genetics. 16, 12, 24 p., e1009231.
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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127 Downloads (Pure)
Nationwide Germline Whole Genome Sequencing of 198 Consecutive Pediatric Cancer Patients Reveals a High Incidence of Cancer Prone Syndromes
Byrjalsen, A., Hansen, T., Stoltze, U., Mehrjouy, M., Barnkob, N., Hjalgrim, L., Mathiasen, R., Lautrup, C., Gregersen, P., Hasle, H., Wehner, P., Tuckuviene, R., Sackett, P., Laspiur, A., Rossing, M., Marvig, R., Tommerup, N., Olsen, T., Scheie, D. & Gupta, R. & 3 others, Gerdes, A.-M., Schmiegelow, K. & Wadt, K., 2020, In: Pediatric Blood and Cancer. 67, Suppl. 4, p. S323-S323 0719.
Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
2009
InterMap3D: predicting and visualizing co-evolving protein residues
Oliveira, R. G., Roque, F. J. S. S. A., Wernersson, R., Sicheritz-Pontén, T., Sackett, P. W., Mølgaard, A. & Pedersen, A. G., 2009, In: Bioinformatics. 25, 15, p. 1963-1965
Research output: Contribution to journal › Journal article › Research › peer-review
2007
MaxAlign: maximizing usable data in an alignment
Oliveira, R. G., Sackett, P. W. & Pedersen, A. G., 2007, In: BMC Bioinformatics. 8, p. 312
Research output: Contribution to journal › Journal article › Research › peer-review

Open Access
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535 Downloads (Pure)
2006
FeatureMap3D - a tool to map protein features and sequence conservation onto homologous structures in the PDB
Wernersson, R., Rapacki, K., Stærfeldt, H. H., Sackett, P. W. & Mølgaard, A., 2006, In: Nucleic Acids Research. 34, SI, p. 84-88
Research output: Contribution to journal › Journal article › Research › peer-review

Peter Wad Sackett

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