Research output per year
Research output per year
Personal profile
Profile
Research work in (Differential) Geometry with applications – mainly to Structural Biology. Proteins are long chain molecules that fold up into beautiful and complicated 3- dimensional structures before fulfilling their function in the living organisms. Within the field of Structural Biology Peter focuses on the use of structural descriptors to distinguish between various proteins native structures, Descriptors give a low dimensional map of the protein universe where Peter has worked on getting nice metric properties of this map. Peter also work on prediction of proteins native structure based on their sequences of amino acids. Mainly through the ESGI workshops, Peter has worked on problems from a number of companies – e.g. on pump designs.Fingerprint
Dive into the research topics where Peter Røgen is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
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Sequence-Similar Protein Domain Pairs With Structural or Topological Dissimilarity
Røgen, P., 2025, (Accepted/In press) In: Proteins: Structure, Function, and Bioinformatics. 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open Access -
Quantifying steric hindrance and topological obstruction to protein structure superposition
Røgen, P., Dec 2021, In: Algorithms for Molecular Biology. 16, 1, 19 p., 1.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile119 Downloads (Pure) -
GISA: using Gauss Integrals to identify rare conformations in protein structures
Gronbaek, C., Hamelryck, T. & Røgen, P., 2020, In: PeerJ. 8, 16 p., e9159.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile94 Downloads (Pure) -
Protein structure refinement by optimization
Carlsen, M. & Røgen, P., 1 Sept 2015, In: Proteins: Structure, Function and Bioinformatics. 83, 9, p. 1616-1624Research output: Contribution to journal › Journal article › Research › peer-review
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On the importance of the distance measures used to train and test knowledge-based potentials for proteins
Carlsen, M., Koehl, P. & Røgen, P., 2014, In: P L o S One. 9, 11, 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile433 Downloads (Pure)
Projects
- 11 Finished
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BladeRunner - Applied Geometry
Nørbjerg, T. B. (PhD Student), Gravesen, J. (Main Supervisor), Brander, D. (Supervisor), Røgen, P. (Examiner), Polthier, K. (Examiner) & Wallner, J. (Examiner)
01/06/2013 → 26/10/2016
Project: PhD
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Protein structure refinement by optimization
Carlsen, M. (PhD Student), Røgen, P. (Main Supervisor), Stolpe, M. (Supervisor), Jørgensen, J. B. (Examiner), Keasar, C. (Examiner) & Hamelryck, T. (Examiner)
Technical University of Denmark
01/08/2011 → 30/09/2015
Project: PhD
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Design of pump geometry
Gravesen, J. (Project Participant), Røgen, P. (Project Participant), Markvorsen, S. (Project Participant), Stolpe, M. (Project Participant) & Bendsøe, M. P. (Contact Person)
Indtægtsdækket virksomhed UK 90
01/03/2005 → 31/05/2005
Project: Research
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Geometriske aspekter af proteiner
Hansen, M. S. (PhD Student), Hansen, V. L. (Main Supervisor), Røgen, P. (Supervisor), Markvorsen, S. (Examiner), Delarue, M. (Examiner) & Hamelryck, T. (Examiner)
15/09/2004 → 31/01/2008
Project: PhD
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Geometric knot theory with applications to proteins
Røgen, P. (Project Manager) & Bohr, H. (Project Participant)
01/09/1999 → 31/08/2001
Project: Research
Activities
- 6 Conference presentations
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ProteinAlignmentObstruction – an algorithm for detecting and quantifying steric and topological obstructions to structural alignments of proteins.
Røgen, P. (Speaker)
10 Jul 2022 → 14 Jul 2022Activity: Talks and presentations › Conference presentations
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Geometric and (Bio-) Topological aspects of Protein 3d-Structures Comparison – navigating the configuration space of long self-avoiding chains in 3d.
Røgen, P. (Invited speaker)
9 May 2022 → 10 May 2022Activity: Talks and presentations › Conference presentations
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Description and Comparison of Protein 3d-Structures with Emphasis on (Bio)-Topology
Røgen, P. (Invited speaker)
25 Jun 2018 → 26 Jun 2018Activity: Talks and presentations › Conference presentations
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Description and Comparison of Protein 3d-Structures with Emphasis on (Bio)-Topology
Røgen, P. (Invited speaker)
12 Jun 2017 → 16 Jun 2017Activity: Talks and presentations › Conference presentations
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ProteinAlignmentObstruction – detecting and quantifying steric and topological obstructions to structural alignments of proteins.
Røgen, P. (Speaker)
10 May 2017 → 14 May 2017Activity: Talks and presentations › Conference presentations