Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 2 Zero Hunger -
SDG 3 Good Health and Well-being
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- 1 Similar Profiles
Collaborations and top research areas from the last five years
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Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species
Chauhan, S. M., Ardalani, O., Hyun, J. C., Monk, J. M., Phaneuf, P. V. & Palsson, B. O., 2025, In: Eukaryotic Cell. 10, 1, e0053224.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile107 Downloads (Orbit) -
iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets
Catoiu, E. A., Krishnan, J., Li, G., Lou, X. A., Rychel, K., Yuan, Y., Bajpe, H., Patel, A., Choe, D., Shin, J., Burrows, J., Phaneuf, P., Zielinski, D. C. & Palsson, B. O., 2025, In: Nucleic Acids Research. 53, D1, p. D99–D106Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile94 Downloads (Orbit) -
Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential
Mohite, O. S., Jørgensen, T. S., Booth, T. J., Charusanti, P., Phaneuf, P. V. & Weber, T., 2025, In: Genome Biology. 26, 9.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile139 Downloads (Orbit) -
PanKB: An interactive microbial pangenome knowledgebase for research, biotechnological innovation, and knowledge mining
Sun, B., Pashkova, L., Pieters, P. A., Harke, A. S., Mohite, O. S., Santos, A., Zielinski, D. C., Palsson, B. O. & Phaneuf, P. V., 2025, In: Nucleic Acids Research. 53, D1, p. D806–D818Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile147 Downloads (Orbit) -
Rare metabolic gene essentiality is a determinant of microniche adaptation in Eschherichia coli
Ardalani, O., Phaneuf, P. V., Krishnan, J., Chauhan, S. M., Pride, D., Zielinski, D. C., Monk, J. M., Nielsen, L. K. & Palsson, B. O., 2025, In: PLOS Pathogens. 21, 12, e1013775.Research output: Contribution to journal › Journal article › Research › peer-review
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Projects
- 2 Active
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Towards sustainable food and agriculture production: integrative computational and metabolic techniques from fungal microbes
Kim, M. (PhD Student), Blin, K. (Main Supervisor), Phaneuf, P. V. (Supervisor) & Kerkhoven, E. J. (Supervisor)
01/04/2024 → 31/03/2027
Project: PhD
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PanKB: Advancing Biotechnology with Pangenomics
Sun, B. (PhD Student), Santos Delgado, A. (Main Supervisor), Phaneuf, P. V. (Supervisor), Winther, O. (Supervisor) & Palsson, B. O. (Supervisor)
01/02/2024 → 31/01/2027
Project: PhD