Research output per year
Research output per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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Dive into the research topics where Patrick Victor Phaneuf is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species
Chauhan, S. M., Ardalani, O., Hyun, J. C., Monk, J. M., Phaneuf, P. V. & Palsson, B. O., 2025, In: mSphere. 10, 1, e0053224.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile6 Downloads (Pure) -
iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets
Catoiu, E. A., Krishnan, J., Li, G., Lou, X. A., Rychel, K., Yuan, Y., Bajpe, H., Patel, A., Choe, D., Shin, J., Burrows, J., Phaneuf, P., Zielinski, D. C. & Palsson, B. O., 2025, In: Nucleic Acids Research. 53, D1, p. D99–D106Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile7 Downloads (Pure) -
Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential
Mohite, O. S., Jørgensen, T. S., Booth, T. J., Charusanti, P., Phaneuf, P. V. & Weber, T., 2025, In: Genome Biology. 26, 9.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile10 Downloads (Pure) -
PanKB: An interactive microbial pangenome knowledgebase for research, biotechnological innovation, and knowledge mining
Sun, B., Pashkova, L., Pieters, P. A., Harke, A. S., Mohite, O. S., Santos, A., Zielinski, D. C., Palsson, B. O. & Phaneuf, P. V., 2025, In: Nucleic Acids Research. 53, D1, p. D806–D818Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile20 Downloads (Pure) -
BGCFlow: systematic pangenome workflow for the analysis of biosynthetic gene clusters across large genomic datasets
Nuhamunada, M., Mohite, O. S., Phaneuf, P. V., Palsson, B. O. & Weber, T., 2024, In: Nucleic Acids Research. 52, 10, p. 5478-5495Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile22 Downloads (Pure)
Projects
- 2 Active
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Towards sustainable food and agriculture production: integrative computational and metabolic techniques from fungal microbes
Kim, M. (PhD Student), Blin, K. (Main Supervisor), Phaneuf, P. V. (Supervisor) & Kerkhoven, E. J. (Supervisor)
01/04/2024 → 31/03/2027
Project: PhD
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PanKB: Advancing Biotechnology with Pangenomics
Sun, B. (PhD Student), Santos Delgado, A. (Main Supervisor), Phaneuf, P. V. (Supervisor), Winther, O. (Supervisor) & Palsson, B. O. (Supervisor)
01/02/2024 → 31/01/2027
Project: PhD