Publications per year
Publications per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Keywords
- User defined:
- Bioinformatics
- Microbiology
- supercomputer
- Antimicrobial resistance
- Antibiotics
- Bacteria
- Genomics
- Metagenomics
- Microbiome
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Publications
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10 misforståelser om antibiotika-resistens
Munk, P., 2024, Videnskab.dk.Research output: Other contribution › Net publication - Internet publication › Communication
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ARGprofiler—a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets
Martiny, H.-M., Pyrounakis, N., Petersen, T. N., Lukjančenko, O., Aarestrup, F. M., Clausen, P. T. L. C. & Munk, P., 2024, In: Bioinformatics. 40, 3, 8 p., btae086.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile19 Downloads (Pure) -
Dine gener er ikke til for din skyld: Du er deres kødrobot
Munk, P., 2024, Videnskab.dk.Research output: Other contribution › Net publication - Internet publication › Communication
Open AccessFile21 Downloads (Pure) -
Discovery of Vibrio cholerae in Urban Sewage in Copenhagen, Denmark
Brinch, C., Otani, S., Munk, P., van den Beld, M., Franz, E. & Aarestrup, F. M., 2024, In: Microbial Ecology. 87, 1, 9 p., 102.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile1 Downloads (Pure) -
Flankophile: a bioinformatic pipeline for prokaryotic genomic synteny analysis
Thorn, A. V., Aarestrup, F. M. & Munk, P., 2024, In: Microbiology Spectrum. 12, 1, 15 p., e0241323.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile51 Downloads (Pure)
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Host range and epidemiology of antibiotic resistance in global genome collections
Thorn, A. V. (PhD Student), Aarestrup, F. M. (Main Supervisor) & Munk, P. (Supervisor)
01/11/2021 → 02/10/2025
Project: PhD
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Analysis of global emergence and spread of antimicrobial resistance in 150k host and environmental samples
Martiny, H.-M. (PhD Student), Estibaritz, A. A. (Examiner), Friedman, J. (Examiner), Petersen, T. N. (Main Supervisor), Brinch, C. (Supervisor) & Munk, P. (Supervisor)
15/11/2019 → 01/03/2023
Project: PhD
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Veterinærforlig III
Andersen, V. D. (PI), Vigre, H. (PI), Aarestrup, F. M. (PI), Munk, P. (PI) & Jensen, M. S. (PI)
01/09/2018 → 31/08/2021
Project: Research
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Genomic antimicrobial resistance, prediction of functionality, resistance gene mobility and zoonotic relevance
Munk, P. (PhD Student), Aarestrup, F. M. (Main Supervisor), Agersø, Y. (Supervisor), Vigre, H. (Supervisor), Bahl, M. I. (Examiner), van Schaik, W. (Examiner) & Hansen, L. H. (Examiner)
15/12/2013 → 16/05/2018
Project: PhD
Datasets
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PanRes - Collection of antimicrobial resistance genes
Martiny, H.-M. (Creator), Pyrounakis, N. (Creator), Lukjančenko, O. (Creator), Petersen, T. N. (Creator), Aarestrup, F. M. (Creator), Clausen, P. T. L. C. (Creator) & Munk, P. (Creator), Zenodo, 27 Nov 2023
DOI: 10.5281/zenodo.10091602, https://zenodo.org10091602
Dataset
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MetalResistance - Collection of metal resistance genes
Martiny, H.-M. (Creator), Pyrounakis, N. (Creator), Lukjančenko, O. (Creator), Petersen, T. N. (Creator), Aarestrup, F. M. (Creator), Clausen, P. T. L. C. (Creator) & Munk, P. (Creator), Zenodo, 31 Aug 2023
DOI: 10.5281/zenodo.8108201, https://zenodo.org/record/8108201
Dataset
Press/Media
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Anvendelsesmuligheder for metagenomsekventering
24/10/2018
1 item of Media coverage
Press/Media: Press / Media