Research Output per year
Network
Recent external collaboration on country level. Dive into details by clicking on the dots.
Research Output 1994 2020
Metaphylogenetic analysis of global sewage reveals that bacterial strains associated with human disease show less degree of geographic clustering
Ahrenfeldt, J., Waisi, M., Loft, I. C., Clausen, P. T. L. C., Allesøe, R. L., Szarvas, J., Hendriksen, R. S., Aarestrup, F. M. & Lund, O., 2020, In : Scientific Reports. 10, 11 p., 3033.Research output: Contribution to journal › Journal article › Research › peer-review
Open Access
File
Prediction of Acquired Antimicrobial Resistance for Multiple Bacterial Species Using Neural Networks
Aytan, D., Clausen, P. T. L. C., Bortolaia, V., Aarestrup, F. M. & Lund, O., 2020, In : mSystems. 5, 1, 15 p., e00774-19.Research output: Contribution to journal › Journal article › Research › peer-review
Open Access
File
Ceftriaxone use in a tertiary care hospital in Kilimanjaro, Tanzania: A need for a hospital antibiotic stewardship programme
Sonda, T. B., Horumpende, P. G., Kumburu, H. H., van Zwetselaar, M., Mshana, S. E., Alifrangis, M., Lund, O., Møller Aarestrup, F., Chilongola, J. O., Mmbaga, B. T. & Kibiki, G. S., 2019, In : PLOS ONE. 14, 8, 11 p., e0220261.Research output: Contribution to journal › Journal article › Research › peer-review
Open Access
File
Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries
Asplund, M., Kjartansdóttir, K. R., Mollerup, S., Vinner, L., Fridholm, H., Herrera, J. A. R., Friis-Nielsen, J., Hansen, T. A., Jensen, R. H., Nielsen, I. B., Richter, S. R., Rey-Iglesia, A., Matey-Hernandez, M. L., Alquezar-Planas, D. E., Olsen, P. V. S., Sicheritz-Pontén, T., Willerslev, E., Lund, O., Brunak, S., Mourier, T. & 3 others, , 2019, In : Clinical Microbiology and Infection. 25, 10, p. 1277-1285Research output: Contribution to journal › Journal article › Research › peer-review
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
Hendriksen, R. S., Munk, P., Njage, P. M. K., van Bunnik, B., McNally, L., Lukjancenko, O., Röder, T., Nieuwenhuijse, D., Karlsmose Pedersen, S., Kjeldgaard, J. S., Kaas, R. S., Clausen, P. T. L. C., Vogt, J. K., Leekitcharoenphon, P., van de Schans, M. G. M., Zuidema, T., de Roda Husman, A. M., Rasmussen, S., Petersen, B., Global, S. S. P. C. & 14 others, , 2019, In : Nature Communications. 10, 12 p., 1124.Research output: Contribution to journal › Journal article › Research › peer-review
Open Access
File
Projects 1992 2021
Machine learning of antimicrobial resistance
Aytan, D., Aarestrup, F. M., Rasmussen, S. & Lund, O.
15/10/2018 → 14/10/2021
Project: PhD
PROVIDE: PROVIDE - Protein valorization through informatics, hydrolysis, and separation
Hansen, E. B., Bang-Berthelsen, I., Jacobsen, C., Holdt, S. L., García Moreno, P. J., Lund, O., Marcatili, P., Hyldig, G. & Sørensen, R.
01/09/2017 → 31/08/2021
Project: Research
Fast-tracking the identification of safe and effective probiotic bacteria by in sillico prediction of bacterial genomic features
Tang Karlsen, S., Bælum, J., Henderson, G. & Lund, O.
01/08/2017 → 31/07/2020
Project: PhD
Evergreen methods for phylogeny
Szarvas, J., Aarestrup, F. M. & Lund, O.
01/08/2017 → 31/07/2020
Project: PhD
Typing and pheno typing based on direct sequencing of samples
Clausen, P. T. L. C., Aarestrup, F. M. & Lund, O.
01/07/2017 → 30/06/2020
Project: PhD