Projects per year
Search results
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Active
Deep Immune Receptor Modelling
Machado, L. (PhD Student), Jenkins, T. P. (Main Supervisor), Hadrup, S. R. (Supervisor) & Nielsen, M. (Supervisor)
01/06/2025 → 31/05/2028
Project: PhD
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Design and characterization of novel T-cell-receptor-like minibinders
Scapolo, B. (PhD Student), Hadrup, S. R. (Main Supervisor), Jenkins, T. P. (Supervisor), Johansen, K. H. (Supervisor) & Nielsen, M. (Supervisor)
01/03/2024 → 28/02/2027
Project: PhD
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Development of protein structure based methods for T cell specificity prediction
Deleuran, S. N. (PhD Student), Nielsen, M. (Main Supervisor) & Lund, O. (Supervisor)
01/06/2023 → 31/05/2026
Project: PhD
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Personalized screening of neoantigen-specific CD8 T cells in single-cell resolution
Nos, G. (PhD Student), Hadrup, S. R. (Main Supervisor), Munk, K. K. (Supervisor), Natarajan, K. (Supervisor) & Nielsen, M. (Supervisor)
01/01/2023 → 31/12/2025
Project: PhD
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Development of machine learning methods to identify protein patterns driving autoimmunity
Saksager, A. B. (PhD Student), Quaglia, C. B. (Main Supervisor) & Nielsen, M. (Supervisor)
15/11/2022 → 14/11/2025
Project: PhD
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Immune receptor Immunoinformatics
Clifford, J. N. (PhD Student), Nielsen, M. (Main Supervisor) & Lund, O. (Supervisor)
01/10/2022 → 30/09/2025
Project: PhD
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T Cell Immunoinformatics
Nilsson, J. B. (PhD Student), Nielsen, M. (Main Supervisor) & Quaglia, C. B. (Supervisor)
01/09/2022 → 31/08/2025
Project: PhD
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Training Innate Respiratory Immunity to protect against pandemic viral infection
Zimmermann, J. (PhD Student), Pedersen, G. K. (Supervisor) & Nielsen, M. (Main Supervisor)
01/11/2021 → 06/10/2025
Project: PhD
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Finished
Cancer T cell immunoinformatics
Wan, Y.-T. R. (PhD Student), Nielsen, M. (Main Supervisor), Quaglia, C. B. (Supervisor) & Rasmussen, S. (Examiner)
01/05/2022 → 02/06/2025
Project: PhD
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Accurate classification of allergenic responses using machine learning algorithms
Li, Y. (PhD Student), Quaglia, C. B. (Main Supervisor), Nielsen, M. (Supervisor), Kesmir, C. (Examiner) & Stranzl, T. (Examiner)
01/12/2021 → 22/04/2025
Project: PhD
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AI in antibody design
Høie, M. H. (PhD Student), Nielsen, M. (Main Supervisor), Marcatili, P. (Supervisor), Winther, O. (Supervisor), Boomsma, W. K. (Examiner) & Carranza, N. L. (Examiner)
01/09/2021 → 05/11/2024
Project: PhD
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Improved Immunoinformatic Methods for Rationale T Cell Epitope Discovery
Montemurro, A. (PhD Student), Nielsen, M. (Main Supervisor) & Jessen, L. E. (Supervisor)
01/10/2019 → 16/01/2023
Project: PhD
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Web applications with machine learning for risk identification in pediatric cancer patients
Vang, J. (PhD Student), Papaleo, E. (Main Supervisor), Nielsen, M. (Supervisor), Mikkelsen, T. S. (Supervisor) & Schmiegelow, K. (Supervisor)
15/07/2019 → 28/11/2022
Project: PhD
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Development of Immunoinformatics prediction methods for improved rational identification of T cell epitopes
Povlsen, H. R. (PhD Student), Nielsen, M. (Main Supervisor) & Jessen, L. E. (Supervisor)
01/04/2019 → 14/12/2022
Project: PhD
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Interrogation of T cell recognition in cancer immune therapy
Kristensen, N. P. (PhD Student), Reading, J. (Examiner), Hadrup, S. R. (Main Supervisor), Nielsen, M. (Supervisor), Svane, I. M. (Supervisor) & Buggert, M. (Examiner)
01/03/2019 → 16/01/2023
Project: PhD
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T Cell Immunoinformatics
Reynisson, B. (PhD Student), Purcell, A. W. (Examiner), Nielsen, H. (Examiner), Kringelum, J. V. (Examiner), Nielsen, M. (Main Supervisor) & Marcatili, P. (Supervisor)
01/04/2018 → 17/06/2021
Project: PhD
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A personalized approach for increased clinical efficacy of cancer immuneotherapy
Reynisson, B. (PhD Student), Nielsen, M. (Project Manager), Hadrup, S. R. (Project Manager) & Svane, I. M. (Project Coordinator)
01/04/2018 → 31/03/2021
Project: Research
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Towards accurate prediction of T cell targests: Learning the rules of T cell receptor interaction
Holm, J. S. (PhD Student), Buonaguro, L. (Examiner), Donia, M. (Examiner), Heegaard, P. M. H. (Examiner), Hadrup, S. R. (Main Supervisor) & Nielsen, M. (Supervisor)
01/10/2017 → 15/04/2021
Project: PhD
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Towards accurate prediction of T cell targets; Learning the rules of T cell receptor interactions
Nielsen, M. (Project Manager), Jessen, L. E. (Project Participant) & Hadrup, S. R. (Project Participant)
01/08/2017 → 31/07/2020
Project: Research
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Metagenomic Data Stratified using Artificial Intelligence
Nissen, J. N. (PhD Student), Igel, C. (Examiner), Sczyrba, A. (Examiner), Vestergaard, G. A. (Examiner), Pedersen, A. G. (Main Supervisor), Nielsen, M. (Supervisor) & Rasmussen, S. (Supervisor)
Technical University of Denmark
01/11/2016 → 30/09/2020
Project: PhD
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Development of Immunoinformatics prediction methods for improved understanding of TCR-peptide-MHC interactions
Munk, K. K. (PhD Student), Nielsen, M. (Main Supervisor), Marcatili, P. (Supervisor), Olsen, L. R. (Examiner), Holberg Blicher, T. (Examiner) & Deane, C. M. (Examiner)
01/08/2016 → 30/09/2019
Project: PhD
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B-cell immunoinformatics
Jespersen, M. C. (PhD Student), Nielsen, M. (Main Supervisor), Marcatili, P. (Supervisor), Vestergaard, G. A. (Examiner), Bonvin, A. M. J. J. (Examiner) & Lindorff-Larsen, K. (Examiner)
01/08/2016 → 30/09/2019
Project: PhD
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High Performance Machine Learning Methods applied within Bioinformatics
Jurtz, V. I. (PhD Student), Nielsen, M. (Main Supervisor), Winther, O. (Supervisor), Petersen, T. N. (Examiner), Gfeller, D. (Examiner), Lund, O. (Supervisor) & Buus, S. (Examiner)
15/12/2014 → 22/01/2018
Project: PhD
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Combating Methicillin Resistant Staphylococcus aureus (MRSA) with bacteriophages
Zschach, H. (PhD Student), Nielsen, M. (Main Supervisor), Hasman, H. (Supervisor), Larsen, M. V. (Supervisor), Petersen, B. (Examiner), Vogensen, F. K. (Examiner) & Clokie, M. R. J. (Examiner)
Technical University of Denmark
01/12/2014 → 22/01/2018
Project: PhD
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Isolation and characterization of bacteriaophages with therapeutic potential
Villarroel, J. (PhD Student), Nielsen, M. (Main Supervisor), Kilstrup, M. (Supervisor), Larsen, M. V. (Supervisor), Nielsen, H. (Examiner), Lavigne, R. (Examiner) & Nielsen, D. S. (Examiner)
Technical University of Denmark
01/12/2013 → 28/02/2018
Project: PhD
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Discovery of Novel Treponema Antigens in Digital Dermatitis in Cattle by Metatranscriptomics and Peptide-chip Technology
Nielsen, M. (Project Manager), Boye, M. (Project Manager), Schou, K. K. (Project Participant) & Sicheritz-Pontén, T. (Project Participant)
01/01/2013 → 30/06/2015
Project: Research
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Identification of the features contributing to immunodominance
Trolle, T. (PhD Student), Nielsen, M. (Main Supervisor), Eklund, A. C. (Examiner), Ternette, N. M. N. (Examiner), Lund, O. (Supervisor) & Buus, S. (Examiner)
Technical University of Denmark
15/12/2012 → 22/03/2016
Project: PhD
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Human Personality - Identification of important genotypic and phenotypic factors for the development of an individual's personality
Wolffhechel, K. M. B. (PhD Student), Jarmer, H. Ø. (Main Supervisor), Pedersen, A. G. (Supervisor), Nielsen, M. (Examiner), Lindgren, C. M. (Examiner) & Reuter, M. (Examiner)
Technical University of Denmark
15/12/2012 → 29/02/2016
Project: PhD
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Prediction of antigen_BCR interactions based on high throughput peptide chip data and prediction of MHC-peptide-TCR Interactions
Hansen, C. S. (PhD Student), Nielsen, M. (Main Supervisor), Eklund, A. C. (Examiner), Agüero, F. (Examiner), Andersen, P. S. (Examiner) & Lund, O. (Supervisor)
Technical University of Denmark
01/08/2012 → 25/11/2015
Project: PhD
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IEDB 2
Nielsen, M. (Project Manager), Munk, K. K. (Project Participant), Jespersen, M. C. (Project Participant), Marcatili, P. (Project Participant) & Jurtz, V. I. (Project Participant)
15/12/2011 → 15/12/2018
Project: Research
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Epitope prediction methods
Karosiene, E. (PhD Student), Nielsen, M. (Main Supervisor), Sicheritz-Pontén, T. (Examiner), Andersen, P. S. (Examiner), Asquith, B. (Examiner) & Lund, O. (Supervisor)
Technical University of Denmark
01/09/2010 → 27/11/2013
Project: PhD
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Bioinformatics for high-density peptide microarrays
Andreatta, M. (PhD Student), Nielsen, M. (Supervisor), Winther, O. (Examiner), Bader, G. (Examiner), Willemoes, M. (Examiner) & Lund, O. (Main Supervisor)
01/10/2009 → 17/12/2012
Project: PhD
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T Cell Reactive Tetramers for Virus Infections in Pigs
Jungersen, G. (Project Manager), Pedersen, L. E. (Project Participant), Nielsen, M. (Project Participant), Buus, S. (Project Manager) & Golde, W. T. (Project Manager)
01/07/2009 → 31/12/2012
Project: Research
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Development and Application of Potentials for Protein-Protein Interactions
Zhang, H. (PhD Student), Nielsen, M. (Main Supervisor), Lundegaard, C. (Supervisor), Petersen, T. N. (Examiner), Kesmir, C. (Examiner), Lund, O. (Supervisor) & Jørgensen, F. S. (Examiner)
15/10/2006 → 20/10/2010
Project: PhD
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Materialedata og plasticitetsteori for COMPRECIT
Nielsen, M. (PhD Student), Nepper-Christensen, P. (Supervisor), Sørensen, H.-C. (Examiner), Jensen, B. C. (Supervisor) & Nielsen, M. P. (Main Supervisor)
Akademiet for de Tekniske Videnskaber
01/10/1992 → 06/12/1995
Project: PhD