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Research Output

Book chapter

Application of RNA-seq and Bioimaging Methods to Study Microbe-Microbe Interactions and Their Effects on Biofilm Formation and Gene Expression

Amador Hierro, C. I., Sternberg, C. & Jelsbak, L., 2017, Host-Pathogen Interactions. López-Baena, F. J. & Medina, C. (eds.). Springer, Vol. 1734. p. 131-158 28 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

Conference abstract for conference

Aspergillus triggers phenazine production in Pseudomonas aeruginosa

Jensen, B. G., Jelsbak, L., Søndergaard, I., Pedersen, M. H., Frisvad, J. C. & Nielsen, K. F., 2011.

Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

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118 Downloads (Pure)

Curbing the development and spread of 'high risk' bacterial pathogens

Jelsbak, L., 2016. 1 p.

Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

Open Access

Suppression of Aspergillus by Pseudomonas aeruginosa

Jensen, B. G., Jelsbak, L., Søndergaard, I., Frisvad, J. C. & Nielsen, K. F., 2011.

Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

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85 Downloads (Pure)
Conference abstract in journal

Evolutionary dynamics of pseudomonas aeruginosa in CF

Molin, S., Jelsbak, L., Johansen, H. & Hoiby, N., 2012, In : Pediatric Pulmonology. 47, p. 152-153

Research output: Contribution to journalConference abstract in journalResearchpeer-review

Conference abstract in proceedings

Developing a CRISPR/CAS9-assisted recombineering system for natural soil pseudomonads

Hansen, M. L. & Jelsbak, L., 2018, The Danish Microbiological Society Annual Congress 2018 - programme & abstracts. Copenhagen, Denmark: Danish Microbiological Society, p. 34-35

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Open Access
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194 Downloads (Pure)

Epistatic Mutations And Unpredictable Phenotypes In Pseudomonas Aeruginosa

Andresen, E. K., Abou Hachem, M. & Jelsbak, L., 2015, The Danish Microbiological Society Annual Congress 2015: Programme & Abstracts. Copenhagen, p. 49-49

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Genomic Evolution Of The Mdr Serotype O12 Pseudomonas Aeruginosa Clone

Thrane, S. W., Taylor, V. L., Freschi, L., Kukavica-Ibrulj, I., Boyle, B., Laroche, J., Pirnay, J-P., Lévesque, R. C., Lam, J. S. & Jelsbak, L., 2015, The Danish Microbiological Society Annual Congress 2015: Programme & Abstracts. Copenhagen, p. 48-48

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Modulation of S. aureus Quorum Sensing by P. aeruginosa

Amador Hierro, C. I. & Jelsbak, L., 2016, Programme & Abstracts. The Danish Microbiological Society Annual Congress 2016. Danish Microbiological Society, p. 44 1 p. P19

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearch

Open Access
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94 Downloads (Pure)

Novel Path Towards Colistin Resistance In Pseudomonas Aeruginosa During Chronic Infection Involves Polymorphisms In Uncharacterized Glycosyltransferase Gene

Hermansen, G. M. M. & Jelsbak, L., 2015, The Danish Microbiological Society Annual Congress 2015: Programme & Abstracts. Copenhagen, p. 32-33

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

phuR intergenic mutation results in pleiotropic effects on global gene expression

Khademi, S. M. H., Wassermann, T., Ciofu, O. & Jelsbak, L., 2015, Proceedings of the ASM Conference on Pseudomonas 2015. American Society for Microbiology, p. 126-127 126

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Open Access
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107 Downloads (Pure)

Rnaseq As A Method To Study Microbial Interactions Arising In The Cystic Fibrosis Airways

Amador Hierro, C. I. & Jelsbak, L., 2015, The Danish Microbiological Society Annual Congress 2015: Programme & Abstracts. Copenhagen, p. 68-68

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Substantial Molecular Evolution In Prolonged Latent Mycobacterium Tuberculosis Infections In Humans

Lillebaek, T., Norman, A., Rasmussen, E. M., B. Folkvardsen, D., Marvig, R., Bengaard Andersen, Å. & Jelsbak, L., 2015, The Danish Microbiological Society Annual Congress 2015: Programme & Abstracts. Copenhagen, p. 50-50

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

The identification and study of adaptive intergenic mutations in bacterial pathogens

Sazinas, P., Anbo, M. & Jelsbak, L., 2018, The Danish Microbiological Society Annual Congress 2018 - programme & abstracts. Copenhagen, Denmark: Danish Microbiological Society, p. 67-67

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Open Access
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90 Downloads (Pure)

Within-host evolution of Pseudomonas aeruginosa toward iron acquisition from hemoglobin in polymicrobial CF infections

Khademi, S. M. H., Marvig, R. L., Pedersen, S. D. & Jelsbak, L., 2014, Proceedings of the 5th ASM Conference on Cell-Cell Communication in Bacteria. American Society for Microbiology, p. 60-61 46

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Open Access
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99 Downloads (Pure)

Working in the biomedical engineering domain: opportunities and challenges

Jelsbak, L., 2015, Book of Abstracts. DTU's Sustain Conference 2015. Lyngby: Technical University of Denmark, 1 p. Q-1

Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

Open Access
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74 Downloads (Pure)
Journal article

A Bacteriophage-Acquired O-Antigen Polymerase (Wzyβ) from P. aeruginosa Serotype O16 Performs a Varied Mechanism Compared to Its Cognate Wzyα

Taylor, V. L., Hoage, J. F. J., Thrane, S. W., Huszczynski, S. M., Jelsbak, L. & Lam, J. S., 2016, In : Frontiers in Microbiology. 7, 15 p., 393.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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230 Downloads (Pure)

Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective.

Folkesson, A., Jelsbak, L., Yang, L., Johansen, H. K., Ciofu, O., Høiby, N. & Molin, S., 2012, In : Nature Reviews. Microbiology. 10, 12, 841 p.

Research output: Contribution to journalJournal articleResearchpeer-review

1 Downloads (Pure)

A Major Mycobacterium tuberculosis outbreak caused by one specific genotype in a low-incidence country: Exploring gene profile virulence explanations: Exploring gene profile virulence explanations

Folkvardsen, D. B., Norman, A., Andersen, Å. B., Rasmussen, E. M., Lillebaek, T. & Jelsbak, L., 2018, In : Scientific Reports. 8, 8 p., 11869.

Research output: Contribution to journalJournal articleResearchpeer-review

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Antibiotic combination therapy can select for broad-spectrum multidrug resistance in Pseudomonas aeruginosa

Vestergaard, M., Paulander, W., Marvig, R. L., Clasen, J., Jochumsen, N., Molin, S., Jelsbak, L., Ingmer, H. & Folkesson, S. A., 2016, In : International Journal of Antimicrobial Agents. 47, p. 48-55 8 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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1213 Downloads (Pure)

Application of WGS data for O-specific antigen analysis and in silico serotyping of Pseudomonas aeruginosa isolates

Thrane, S. W., Taylor, V. L., Lund, O., Lam, J. S. & Jelsbak, L., 2016, In : Journal of Clinical Microbiology. 54, 7, p. 1782-1788 7 p.

Research output: Contribution to journalJournal articleResearchpeer-review

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A rare thioquinolobactin siderophore present in a bioactive Pseudomonas sp. DTU12.1

Sazinas, P., Hansen, M. L., Aune, M. I., Fischer, M. H. & Jelsbak, L., 2019, In : Genome Biology and Evolution. 11, 12, p. 3529-3533 5 p., evz267.

Research output: Contribution to journalJournal articleResearchpeer-review

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Archetypal analysis of diverse Pseudomonas aeruginosa transcriptomes reveals adaptation in cystic fibrosis airways

Thøgersen, J. C., Mørup, M., Pedersen, S. D., Molin, S. & Jelsbak, L., 2013, In : BMC Bioinformatics. 14, 1, p. 279

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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445 Downloads (Pure)

Bacterial adaptation during chronic infection revealed by independent component analysis of transcriptomic data

Yang, L., Rau, M. H., Yang, L., Høiby, N., Molin, S. & Jelsbak, L., 2011, In : B M C Microbiology. 11, p. 184

Research output: Contribution to journalJournal articleResearchpeer-review

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261 Downloads (Pure)

Bacteriocin-mediated competition in cystic fibrosis lung infections

Ghoul, M., West, S. A., Johansen, H. K., Molin, S., Harrison, O. B., Maiden, M. C. J., Jelsbak, L., Bruce, J. B. & Griffin, A. S., 2015, In : Proceedings of the Royal Society B: Biological Sciences. 282, 1814, 8 p., 20150972.

Research output: Contribution to journalJournal articleResearchpeer-review

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301 Downloads (Pure)
Open Access
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389 Downloads (Pure)

Cell behavior and cell-cell communication during fruiting body morphogenesis in Myxococcus xanthus

Jelsbak, L. & Søgaard-Andersen, L., 2003, In : Journal of Microbiological Methods. 55, 3, p. 829-839 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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88 Downloads (Pure)

Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium

Freschi, L., Jeukens, J., Kukavica-Ibrulj, I., Boyle, B., Dupont, M-J., Laroche, J., Larose, S., Maaroufi, H., Fothergill, J. L., Moore, M., Jelsbak, L. & Thrane, S. W., 2015, In : Frontiers in Microbiology. 6, 8 p., 1036.

Research output: Contribution to journalJournal articleResearchpeer-review

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232 Downloads (Pure)

Complete Genome Sequence of a Bioactive Pseudomonas sp. Strain, DTU12.3, Isolated from Soil in Denmark

Sazinas, P., Aune, M. I., Fischer, M. H., Lauritsen, J. G., Gram, L. & Jelsbak, L., 2019, In : Microbiology Resource Announcements. 8, 16, 2 p., e00121-19.

Research output: Contribution to journalJournal articleResearchpeer-review

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182 Downloads (Pure)

Complete Genome Sequence of Pseudomonas sp. Strain SK, Isolated from Organic Wheat Rhizosphere

Khatri, S., Sazinas, P., Shivay, Y. S., Sharma, S. & Jelsbak, L., 2020, In : Microbiology Resource Announcements. 9, 26, 2 p., e00510-20.

Research output: Contribution to journalJournal articleResearchpeer-review

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9 Downloads (Pure)

Complete genome sequence of the myxobacterium Sorangium cellulosum

Schneiker, S., Perlova, O., Kaiser, O., Gerth, K., Alici, A., Altmeyer, MO., Bartels, D., Bekel, T., Beyer, S., Bode, E. HB., Bolten, CJ., Choudhuri, JV., Doss, S., Elnakady, YA., Frank, B., Gaigalat, L., Goesmann, A., Groeger, C., Gross, F., Jelsbak, L. & 37 others, Kalinowski, J., Kegler, C., Knauber, T., Konietzny, S., Kopp, M., Krause, L., Krug, D., Linke, B., Mahmud, T., Martinez-Arias, R., McHardy, AC., Merai, M., Meyer, F., Mormann, S., Muñoz-Dorado, J., Perez, J., Pradella, S., Rachid, S., Raddatz, G., Rosenau, F., Rückert, C., Sasse, F., Scharfe, M., Schuster, SC., Suen, G., Treuner-Lange, A., Velicer, GJ., Vorhölter, FJ., Weissman, KJ., Welch, RD., Wenzel, SC., Whitworth, DE., Wilhelm, S., Wittmann, C., Blöcker, H., Pühler, A. & Müller, R., 2007, In : Nature Biotechnology. 27, 11, p. 1281-1289

Research output: Contribution to journalJournal articleResearchpeer-review

Coupling gene expression and multicellular morphogenesis during fruiting body formation in Myxococcus xanthus

Søgaard-Andersen, L., Overgaard, M., Lobedanz, S., Ellehauge, E., Jelsbak, L. & Rasmussen, A. A., 2003, In : Molecular Microbiology. 48, 1

Research output: Contribution to journalJournal articleResearchpeer-review

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Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment

Rau, M. H., Marvig, R. L., Ehrlich, G. D., Molin, S. & Jelsbak, L., 2012, In : Environmental Microbiology. 14, 8, p. 2200-2211

Research output: Contribution to journalJournal articleResearchpeer-review

1 Downloads (Pure)

Draft Genome Sequences of Pseudomonas aeruginosa B3 Strains Isolated from a Cystic Fibrosis Patient Undergoing Antibiotic Chemotherapy

Marvig, R. L., Jochumsen, N., Johansen, H. K., Høiby, N., Molin, S., Sommer, M., Jelsbak, L. & Folkesson, A., 2013, In : Genome Announcements. 1, 5, 2 p., e00804-13.

Research output: Contribution to journalJournal articleResearchpeer-review

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276 Downloads (Pure)

Early adaptive developments of Pseudomonas aeruginosa after the transition from life in the environment to persistent colonization in the airways of human cystic fibrosis hosts

Rau, M. H., Hansen, S. K., Johansen, H. K., Thomsen, L. E., Workman, C., Nielsen, K. F., Jelsbak, L., Høiby, N., Yang, L. & Molin, S., 2010, In : Environmental Microbiology. 12, 6, p. 1643-1658

Research output: Contribution to journalJournal articleResearchpeer-review

Enhancer-binding proteins with a forkhead-associated domain and the sigma(54) regulon in Myxococcus xanthus fruiting body development

Jelsbak, L., Givskov, M. C. & Kaiser, D., 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 8, p. 3010-3015

Research output: Contribution to journalJournal articleResearchpeer-review

Environmental heterogeneity drives within-host diversification and evolution of Pseudomonas aeruginosa.

Markussen, T., Marvig, R. L., Gómez Lozano, M., Aanæs, K., Burleigh, A. E., Høiby, N., Johansen, H. K., Molin, S. & Jelsbak, L., 2014, In : mBio (Online). 5, 5, p. e01592-e01514

Research output: Contribution to journalJournal articleResearchpeer-review

Evolution and diversification of Pseudomonas aeruginosa in the paranasal sinuses of cystic fibrosis children have implications for chronic lung infection

Hansen, S. K., Rau, M. H., Johansen, H. K., Ciofu, O., Jelsbak, L., Yang, L., Folkesson, A., Jarmer, H. Ø., Aanæs, K., von Buchwald, C., Høiby, N. & Molin, S., 2012, In : I S M E Journal. 6, 1, p. 31

Research output: Contribution to journalJournal articleResearchpeer-review

Evolutionary dynamics of bacteria in a human host environment

Yang, L., Jelsbak, L., Marvig, R. L., Pedersen, S. D., Workman, C., Rau, M. H., Hansen, S. K., Folkesson, A., Johansen, H. K., Ciofu, O., Høiby, N., Sommer, M. & Molin, S., 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 18, p. 7481-7486

Research output: Contribution to journalJournal articleResearchpeer-review

1 Downloads (Pure)

Evolutionary insight from whole-genome sequencing of Pseudomonas aeruginosa from cystic fibrosis patients

Marvig, R. L., Madsen Sommer, L. M., Jelsbak, L., Molin, S. & Johansen, H. K., 2015, In : Future Microbiology. 10, 4, p. 599-611 13 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Evolutionary remodeling of global regulatory networks during long-term bacterial adaptation to human hosts

Pedersen, S. D., Yang, L., Molin, S. & Jelsbak, L., 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 19, p. 7766-7771

Research output: Contribution to journalJournal articleResearchpeer-review

Evolution of metabolic divergence in Pseudomonas aeruginosa during long-term infection facilitates a proto-cooperative interspecies interaction

Frydenlund Michelsen, C., Khademi, S. M. H., Johansen, H. K., Ingmer, H., Dorrestein, P. C. & Jelsbak, L., 2016, In : I S M E Journal. 10, p. 1323-1336 14 p.

Research output: Contribution to journalJournal articleResearchpeer-review

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Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators.

Marvig, R. L., Johansen, H. K., Molin, S. & Jelsbak, L., 2013, In : P L o S Genetics. 9, 9, e1003741.

Research output: Contribution to journalJournal articleResearchpeer-review

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Genome Sequence of Pseudomonas aeruginosa Strain DK1-NH57388A, a Stable Mucoid Cystic Fibrosis Isolate

Norman, A., Ciofu, O., Amador Hierro, C. I., Høiby, N. & Jelsbak, L., 2016, In : Genome Announcements. 4, 1, 2 p., e00008-16.

Research output: Contribution to journalJournal articleResearchpeer-review

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Genomic epidemiology of a major Mycobacterium tuberculosis outbreak: Retrospective cohort study in a low incidence setting using sparse time-series sampling

Folkvardsen, D. B., Norman, A., Andersen, Å. B., Rasmussen, E. M., Jelsbak, L. & Lillebaek, T., 2017, In : Journal of Infectious Diseases. 216, 3, 19 p.

Research output: Contribution to journalJournal articleResearchpeer-review

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207 Downloads (Pure)

HldE Is Important for Virulence Phenotypes in Enterotoxigenic Escherichia coli

Maigaard Hermansen, G. M., Boysen, A., Krogh, T. J., Nawrocki, A., Jelsbak, L. & Møller-Jensen, J., 2018, In : Frontiers in Cellular and Infection Microbiology. 8, 253, 13 p., 253.

Research output: Contribution to journalJournal articleResearchpeer-review

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In situ growth rates and biofilm development of Pseudomonas aeruginosa populations in chronic lung infections

Yang, L., Haagensen, J. A. J., Jelsbak, L., Johansen, H. K., Sternberg, C., Høiby, N. & Molin, S., 2008, In : Journal of Bacteriology. 190, 8, p. 2767-2776

Research output: Contribution to journalJournal articleResearchpeer-review

Intergenic evolution during host adaptation increases expression of the metallophore pseudopaline in Pseudomonas aeruginosa

Hermansen, G. M. M., Hansen, M. L., Khademi, S. M. H. & Jelsbak, L., 2018, In : Microbiology. 164, 8, p. 1038-1047

Research output: Contribution to journalJournal articleResearchpeer-review

Microbial ecology and adaptation in cystic fibrosis airways

Yang, L., Jelsbak, L. & Molin, S., 2011, In : Environmental Microbiology. 13, 7, p. 1682-1689

Research output: Contribution to journalJournal articleResearchpeer-review

Molecular epidemiology and dynamics of Pseudomonas aeruginosa populations in lungs of cystic fibrosis patients

Jelsbak, L., Johansen, H. K., Frost, A. L. V., Thøgersen, R., Thomsen, L. E., Ciofu, O., Yang, L., Haagensen, J. A. J., Høiby, N. & Molin, S., 2007, In : Infection and Immunity. 75, 5, p. 2214-2224

Research output: Contribution to journalJournal articleResearchpeer-review