Photo of Ivan Mijakovic
  • Kemitorvet, 220, 309F

    2800 Kgs. Lyngby

    Denmark

20022020

Research output per year

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Research Output

  • 69 Journal article
  • 3 Poster
  • 2 Conference abstract in journal
  • 2 Review
2020

Cold-Resistant Heterotrophic Ammonium and Nitrite-Removing Bacteria Improve Aquaculture Conditions of Rainbow Trout (Oncorhynchus mykiss)

Neissi, A., Rafiee, G., Farahmand, H., Rahimi, S. & Mijakovic, I., 2020, (Accepted/In press) In : Microbial Ecology.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access

Evolutionary analysis of the Bacillus subtilis genome reveals new genes involved in sporulation

Shi, L., Derouiche, A., Pandit, S., Rahimi, S., Kalantari, A., Futo, M., Ravikumar, V., Jers, C., Mokkapati, V. R. S. S., Vlahoviček, K. & Mijakovic, I., 2020, (Accepted/In press) In : Molecular Biology and Evolution.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
18 Downloads (Pure)

hipBA toxin-antitoxin systems mediate persistence in Caulobacter crescentus

Huang, C. Y., Gonzalez-Lopez, C., Henry, C., Mijakovic, I. & Ryan, K. R., 2020, In : Scientific Reports. 10, 1, 2865.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
23 Downloads (Pure)

Importance of protein Ser/Thr/Tyr phosphorylation for bacterial pathogenesis

Køhler, J. B., Jers, C., Senissar, M., Shi, L., Derouiche, A. & Mijakovic, I., 2020, (Accepted/In press) In : FEBS Letters.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
9 Downloads (Pure)

Technologies for biological removal and recovery of nitrogen from wastewater

Rahimi, S., Modin, O. & Mijakovic, I., 2020, In : Biotechnology Advances. 43, 107570.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
4 Downloads (Pure)
2019

Antibacterial effect of boron nitride flakes with controlled orientation in polymer composites

Pandit, S., Gaska, K., Mokkapati, V. R. S. S., Forsberg, S., Svensson, M., Kádár, R. & Mijakovic, I., 2019, In : RSC Advances. 9, 57, p. 33454-33459

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
46 Downloads (Pure)

Comparative genomics study reveals Red Sea Bacillus with characteristics associated with potential microbial cell factories (MCFs)

Othoum, G., Prigent, S., Derouiche, A., Shi, L., Bokhari, A., Alamoudi, S., Bougouffa, S., Gao, X., Hoehndorf, R., Arold, S. T., Gojobori, T., Hirt, H., Lafi, F. F., Nielsen, J., Bajic, V. B., Mijakovic, I. & Essack, M., 2019, In : Scientific Reports. 9, 1, 19254.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
21 Downloads (Pure)

Graphene-based biosensors for the detection of prostate cancer protein biomarkers: a review

Xu, L., Wen, Y., Pandit, S., Mokkapati, V. R. S. S., Mijakovic, I., Li, Y., Ding, M., Ren, S., Li, W. & Liu, G., 2019, In : BMC Chemistry. 13, 112.

Research output: Contribution to journalReviewResearchpeer-review

Open Access
File
114 Downloads (Pure)

Manually curated genome-scale reconstruction of the metabolic network of Bacillus megaterium DSM319

Aminian-Dehkordi, J., Mousavi, S. M., Jafari, A., Mijakovic, I. & Marashi, S. A., 2019, In : Scientific Reports. 9, 1, 14 p., 18762.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
53 Downloads (Pure)

Mining biosynthetic gene clusters in Virgibacillus genomes

Othoum, G., Bougouffa, S., Bokhari, A., Lafi, F. F., Gojobori, T., Hirt, H., Mijakovic, I., Bajic, V. B. & Essack, M., 2019, In : BMC Genomics. 20, 1, 696.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
97 Downloads (Pure)

Production of 3-Hydroxypropanoic Acid From Glycerol by Metabolically Engineered Bacteria

Jers, C., Kalantari, A., Garg, A. & Mijakovic, I., 2019, In : Frontiers in Bioengineering and Biotechnology. 7, 124.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
200 Downloads (Pure)

Protein post-translational modifications in bacteria

Macek, B., Forchhammer, K., Hardouin, J., Weber-Ban, E., Grangeasse, C. & Mijakovic, I., 2019, In : NATURE REVIEWS MICROBIOLOGY. 17, p. 651-664

Research output: Contribution to journalJournal articleResearchpeer-review

Structural Analysis of the Hanks-Type Protein Kinase YabT From Bacillus subtilis Provides New Insights in its DNA-Dependent Activation

Shi, L., Cavagnino, A., Rabefiraisana, J-L., Lazar, N., Li de la Sierra-Gallay, I., Ochsenbein, F., Valerio-Lepiniec, M., Urvoas, A., Minard, P., Mijakovic, I. & Nessler, S., 2019, In : Frontiers in Microbiology. 9, 12 p., 3014.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
198 Downloads (Pure)

Triterpenoid-biosynthetic UDP-glycosyltransferases from plants

Rahimi, S., Kim, J., Mijakovic, I., Jung, K., Choi, G., Kim, S-C. & Kim, Y-J., 2019, In : Biotechnology Advances. 37, 7, 18 p., 107394.

Research output: Contribution to journalJournal articleResearchpeer-review

2018

Anti-biofilm effects of gold and silver nanoparticles synthesized by the Rhodiola rosea rhizome extracts

Singh, P., Pandit, S., Beshay, M., Mokkapati, V. R. S. S., Garnæs, J., Olsson, M. E., Sultan, A., Mackevica, A., Mateiu, R. V., Lütken, H., Daugaard, A. E., Baun, A. & Mijakovic, I., 2018, In : Artificial Cells, Nanomedicine and Biotechnology. 46, sup3, p. S886-S899 14 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Antimicrobial Effects of Biogenic Nanoparticles

Singh, P., Garg, A., Pandit, S., Mokkapati, V. R. S. S. & Mijakovic, I., 2018, In : Nanomaterials. 8, 12, 19 p., 1009.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
265 Downloads (Pure)

BioPS: System for screening and assessment of biofuel-production potential of cyanobacteria

Motwalli, O., Essack, M., Salhi, A., Hanks, J., Mijakovic, I. & Bajic, V. B., 2018, In : PLOS ONE. 13, 8, 12 p., e0202002.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
154 Downloads (Pure)

Design strategy of a graphene based bio-sensor for glucose

Cantatore, V., Pandit, S., Mokkapati, V. R. S. S., Schindler, S., Eigler, S., Mijakovic, I. & Panas, I., 2018, In : Carbon. 137, p. 343-348

Research output: Contribution to journalJournal articleResearchpeer-review

Gold Nanoparticles in Diagnostics and Therapeutics for Human Cancer

Singh, P., Pandit, S., Mokkapati, V. R. S. S., Garg, A., Ravikumar, V. & Mijakovic, I., 2018, In : International Journal of Molecular Sciences . 19, 7, 16 p., 1979.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
277 Downloads (Pure)

Green synthesis of gold and silver nanoparticles from Cannabis sativa (industrial hemp) and their capacity for biofilm inhibition

Singh, P., Pandit, S., Garnæs, J., Tunjic, S., Mokkapati, V. R. S. S., Sultan, A., Thygesen, A., Mackevica, A., Mateiu, R. V., Daugaard, A. E., Baun, A. & Mijakovic, I., 2018, In : International Journal of Nanomedicine. 13, p. 3571-3591

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
525 Downloads (Pure)

In-depth analysis of Bacillus subtilis proteome identifies new ORFs and traces the evolutionary history of modified proteins

Ravikumar, V., Nalpas, N. C., Anselm, V., Krug, K., Lenuzzi, M., Šestak, M. S., Domazet-Lošo, T., Mijakovic, I. & Macek, B., 2018, In : Scientific Reports. 8, 17246.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
254 Downloads (Pure)

In silico exploration of Red Sea Bacillus genomes for natural product biosynthetic gene clusters

Othoum, G., Bougouffa, S., Razali, R., Bokhari, A., Alamoudi, S., Antunes, A., Gao, X., Hoehndorf, R., Arold, S. T., Gojobori, T., Hirt, H., Mijakovic, I., Bajic, V. B., Lafi, F. F. & Essack, M., 2018, In : B M C Genomics. 19, 11 p., 382.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
363 Downloads (Pure)

Serine/Threonine protein kinases from bacteria, archaea and eukarya share a common evolutionary origin deeply rooted in the tree of life

Stancik, I. A., Šestak, M. S., Ji, B., Axelson-Fisk, M., Franjevic, D., Jers, C., Domazet-Lošo, T. & Mijakovic, I., 2018, In : Journal of Molecular Biology. 430, 1, p. 27-32

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
221 Downloads (Pure)

The Global Acetylome of the Human Pathogen Vibrio cholerae V52 Reveals Lysine Acetylation of Major Transcriptional Regulators

Jers, C., Ravikumar, V., Lezyk, M. J., Sultan, A., Sjöling, Å., Wai, S. N. & Mijakovic, I., 2018, In : Frontiers in Cellular and Infection Microbiology. 7, 13 p., 537.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
297 Downloads (Pure)
2017

Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity

Nielsen, J., Archer, J., Essack, M., Bajic, V. B., Gojobori, T. & Mijakovic, I., 2017, In : Applied Microbiology and Biotechnology. 101, 12, p. 4837-4851

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
210 Downloads (Pure)

Combination of Cold Atmospheric Plasma and Vitamin C Effectively Disrupts Bacterial Biofilms

Pandit, S., Mokkapati, V. R. S. S., Helgadóttir, S. H., Westerlund, F. & Mijakovic, I., 2017, In : Clinical Microbiology. 6, 3, 4 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
337 Downloads (Pure)

Conversion of Glycerol to 3-Hydroxypropanoic Acid by Genetically Engineered Bacillus subtilis

Kalantari, A., Chen, T., Ji, B., Stancik, I. A., Ravikumar, V., Franjevic, D., Saulou-Berion, C., Goelzer, A. & Mijakovic, I., 2017, In : Frontiers in Microbiology. 8, 11 p., 638.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
282 Downloads (Pure)

In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria.

Motwalli, O., Essack, M., Jankovic, B. R., Ji, B., Liu, X., Ansari, H. R., Hoehndorf, R., Gao, X., Arold, S. T., Mineta, K., Archer, J. A. C., Gojobori, T., Mijakovic, I. & Bajic, V. B., 2017, In : B M C Genomics. 18, 33, 21 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
71 Downloads (Pure)

Low Concentrations of Vitamin C Reduce the Synthesis of Extracellular Polymers and Destabilize Bacterial Biofilms

Pandit, S., Ravikumar, V., Abdel-Haleem, A. M., Derouiche, A., Mokkapati, V. R. S. S., Sihlbom, C., Mineta, K., Gojobori, T., Gao, X., Westerlund, F. & Mijakovic, I., 2017, In : Frontiers in Microbiology. 8, 11 p., 2599.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
228 Downloads (Pure)

Vitamin C Pretreatment Enhances the Antibacterial Effect of Cold Atmospheric Plasma

Helgadottir, S., Pandit, S., Mokkapati, V. R. S. S., Westerlund, F., Apell, P. & Mijakovic, I., 2017, In : Frontiers in Cellular and Infection Microbiology. 7, 8 p., 43.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
306 Downloads (Pure)
2016

Bacillus subtilis single-stranded DNA-binding protein SsbA is phosphorylated at threonine 38 by the serine/threonine kinase YabT

Derouiche, A., Petranovic, D., Macek, B. & Mijakovic, I., 2016, In : Periodicum Biologorum. 118, 4, p. 399-404

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
202 Downloads (Pure)

Exploring the diversity of protein modifications: special bacterial phosphorylation systems

Mijakovic, I., Grangeasse, C. & Turgay, K., 2016, In : F E M S Microbiology Reviews. 40, p. 398-417 20 p., fuw003.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
211 Downloads (Pure)

Role of Protein Phosphorylation in the Regulation of Cell Cycle and DNA-Related Processes in Bacteria

Garcia-Garcia, T., Poncet, S., Derouiche, A., Shi, L., Mijakovic, I. & Noirot-Gros, M-F., 2016, In : Frontiers in Microbiology. 7, 11 p., 184.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
349 Downloads (Pure)

Substrate Specificity of the Bacillus subtilis BY-Kinase PtkA Is Controlled by Alternative Activators: TkmA and SalA

Derouiche, A., Shi, L., Kalantari, A. & Mijakovic, I., 2016, In : Frontiers in Microbiology. 7, 7 p., 1525.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
256 Downloads (Pure)
2015

Elucidating Host-Pathogen Interactions Based on Post-Translational Modifications Using Proteomics Approaches

Ravikumar, V., Jers, C. & Mijakovic, I., 2015, In : Frontiers in Microbiology. 6, 7 p., 1312.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
276 Downloads (Pure)

Serine/threonine/tyrosine phosphorylation regulates DNA binding of bacterial transcriptional regulators

Kalantari, A., Derouiche, A., Shi, L. & Mijakovic, I., 2015, In : Microbiology. 161, 9, p. 1720-1729 10 p.

Research output: Contribution to journalReviewResearchpeer-review

2013

Bacillus subtilis serine/threonine protein kinase YabT is involved in spore development via phosphorylation of a bacterial recombinase

Bidnenko, V., Shi, L., Kobir, A., Ventroux, M., Pigeonneau, N., Henry, C., Trubuil, A., Noirot‐Gros, MF. & Mijakovic, I., 2013, In : Molecular Microbiology. 88, 5, p. 921-935

Research output: Contribution to journalJournal articleResearchpeer-review

Interaction of bacterial fatty-acid-displaced regulators with DNA is interrupted by tyrosine phosphorylation in the helix-turn-helix domain

Derouiche, A., Bidnenko, V., Grenha, R., Pigonneau, N., Ventroux, M., Franz-Wachtel, M., Nessler, S., Noirot-Gros, M-F. & Mijakovic, I., 2013, In : Nucleic acids research. 41, 20, p. 209371-9381

Research output: Contribution to journalJournal articleResearchpeer-review

Protein‐serine/threonine/tyrosine kinases in bacterial signaling and regulation

Cousin, C., Derouiche, A., Shi, L., Pagot, Y., Poncet, S. & Mijakovic, I., 2013, In : FEMS Microbiology Letters. 346, 1, p. 11-19

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
163 Downloads (Pure)
2012

Bacterial tyrosine kinases: evolution, biological function and structural insights

Grangeasse, C., Nessler, S. & Mijakovic, I., 2012, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 367, 1602, p. 2640-2655

Research output: Contribution to journalJournal articleResearch

Open Access
File
144 Downloads (Pure)

BYKdb: the Bacterial protein tYrosine Kinase database

Jadeau, F., Grangeasse, C., Shi, L., Mijakovic, I., Deléage, G. & Combet, C., 2012, In : Nucleic acids research. 40, p. D321-D324

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
77 Downloads (Pure)

Impact of phosphoproteomics on studies of bacterial physiology

Mijakovic, I. & Macek, B., 2012, In : FEMS Microbiology Reviews. 36, 4, p. 877-892

Research output: Contribution to journalJournal articleResearchpeer-review

Protein phosphorylation from the perspective of systems biology

Derouiche, A., Cousin, C. & Mijakovic, I., 2012, In : Current Opinion in Biotechnology. 23, 4, p. 585-590

Research output: Contribution to journalJournal articleResearchpeer-review

2011

Analysis of the serine/threonine/tyrosine phosphoproteome of the pathogenic bacterium Listeria monocytogenes reveals phosphorylated proteins related to virulence

Misra, S. K., Milohanic, E., Aké, F., Mijakovic, I., Deutscher, J., Monnet, V. & Henry, C., 2011, In : Proteomics. 11, 21, p. 4155-4165

Research output: Contribution to journalJournal articleResearchpeer-review

Protein phosphorylation in bacterial signal transduction

Kobir, A., Shi, L., Boskovic, A., Grangeasse, C., Franjevic, D., Mijakovic, I. & Marcus Krantz, S. H., 2011, In : B B A - General Subjects. 1810, 10, p. 989-994

Research output: Contribution to journalJournal articleResearchpeer-review

Site‐specific analysis of bacterial phosphoproteomes

Macek, B. & Mijakovic, I., 2011, In : Proteomics. 11, 15, p. 3002-3011

Research output: Contribution to journalJournal articleResearchpeer-review

2010

Bacillus subtilis BY-kinase PtkA controls enzyme activity and localization of its protein substrates

Jers, C., Pedersen, M. M., Paspaliari, D. K., Schutz, W., Johnsson, C., Soufi, B., Macek, B., Jensen, P. R. & Mijakovic, I., 2010, In : Molecular Microbiology. 77, 2, p. 287-299

Research output: Contribution to journalJournal articleResearchpeer-review

Bacterial Protein-Tyrosine Kinases

Shi, L., Kobir, A., Jers, C. & Mijakovic, I., 2010, In : Current Proteomics. 7, 3, Sp. Iss. SI, p. 188-194

Research output: Contribution to journalJournal articleResearchpeer-review

File
595 Downloads (Pure)

Global Transcriptional Analysis of Bacillus licheniformis Reveals an Overlap between Heat Shock and Iron Limitation Stimulon

Nielsen, A. K., Breüner, A., Krzystanek, M., Andersen, J. T., Poulsen, T. A., Olsen, P. B., Mijakovic, I. & Rasmussen, M. D., 2010, In : Journal of Molecular Microbiology and Biotechnology. 18, 3, p. 162-173

Research output: Contribution to journalJournal articleResearchpeer-review

Phosphoglycerate Mutase Is a Highly Efficient Enzyme without Flux Control in Lactococcus lactis

Solem, C., Petranovic, D., Købmann, B., Mijakovic, I. & Jensen, P. R., 2010, In : Journal of Molecular Microbiology and Biotechnology. 18, 3, p. 174-180

Research output: Contribution to journalJournal articleResearchpeer-review