• Kemitorvet, 204, 102

    2800 Kgs. Lyngby

    Denmark

20002020
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Research Output 2000 2020

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Journal article
2020
48 Downloads (Pure)

Predicting effects of changed antimicrobial usage on the abundance of antimicrobial resistance genes in finisher’ gut microbiomes

Dalhoff Andersen, V., Møller Aarestrup, F., Munk, P., Stengaard Jensen, M., de Knegt, L., Bortolaia, V., nudsen, B. E., Lukjancenko, O., Birkegård, A. C. & Vigre, H., 2020, In : Preventive Veterinary Medicine. 174, 10 p., 104853.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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2019
294 Downloads (Pure)

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Hendriksen, R. S., Munk, P., Njage, P. M. K., van Bunnik, B., McNally, L., Lukjancenko, O., Röder, T., Nieuwenhuijse, D., Karlsmose Pedersen, S., Kjeldgaard, J. S., Kaas, R. S., Clausen, P. T. L. C., Vogt, J. K., Leekitcharoenphon, P., van de Schans, M. G. M., Zuidema, T., de Roda Husman, A. M., Rasmussen, S., Petersen, B., Global, S. S. P. C. & 14 others, Amid, C., Cochrane, G., Sicheritz-Pontén, T., Schmitt, H., Alvarez, J. R. M., Aidara-Kane, A., Pamp, S. J., Lund, O., Hald, T., Woolhouse, M., Koopmans, M. P., Vigre, H., Petersen, T. N. & Aarestrup, F. M., 2019, In : Nature Communications. 10, 12 p., 1124.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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2018
133 Downloads (Pure)

Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries

Munk, P., Knudsen, B. E., Lukjacenko, O., Duarte, A. S. R., Van Gompel, L., Luiken, R. E. C., Smit, L. A. M., Schmitt, H., Garcia, A. D., Hansen, R. B., Petersen, T. N., Bossers, A., Ruppé, E., Graveland, H., van Essen, A., Gonzalez-Zorn, B., Moyano, G., Sanders, P., Chauvin, C., David, J. & 21 others, Battisti, A., Caprioli, A., Dewulf, J., Blaha, T., Wadepohl, K., Brandt, M., Wasyl, D., Skarzyńska, M., Zajac, M., Daskalov, H., Saatkamp, H. W., Stärk, K. D. C., Lund, O., Hald, T., Pamp, S. J., Vigre, H., Heederik, D., Wagenaar, J. A., Mevius, D., Møller Aarestrup, F. & EFFORT Group, 1 Aug 2018, In : Nature Microbiology. 3, 8, p. 898-908

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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211 Downloads (Pure)

Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System participants in the identification and susceptibility testing of thermo-tolerant Campylobacter spp. from 2003-2012

Karlsmose Pedersen, S., Wagenaar, J. A., Vigre, H., Roer, L., Mikoleit, M., Aidara-Kane, A., Cawthorne, A. L., Aarestrup, F. M. & Hendriksen, R. S., 2018, In : Journal of Clinical Microbiology. 56, 11, 9 p., e01066-18.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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2017
132 Downloads (Pure)

Computional algorithm for lifetime exposure to antimicrobials in pigs using register data − the LEA algorithm

Birkegård, A. C., Dalhoff Andersen, V., Hisham Beshara Halasa, T., Jensen, V. F., Toft, N. & Vigre, H., 2017, In : Preventive Veterinary Medicine. 146, p. 173-180

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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Spatial patterns of antimicrobial resistance genes in a cross-sectional sample of pig farms with indoor non-organic production of finishers

Birkegård, A. C., Ersbøll, A. K., Hisham Beshara Halasa, T., Clasen, J., Folkesson, A., Vigre, H. & Toft, N., 2017, In : Epidemiology and Infection. 145, 7, p. 1418-1430

Research output: Contribution to journalJournal articleResearchpeer-review

The association between measurements of antimicrobial use and resistance in the faeces microbiota of finisher batches

Dalhoff Andersen, V., de Knegt, L., Munk, P., Jensen, M. S., Agersø, Y., Aarestrup, F. M. & Vigre, H., 2017, In : Epidemiology and Infection. 145, 13, p. 2827-2837 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

2016

A decision support system for the control of Campylobacter in chickens at farm level using data from Denmark

Garcia, A. B., Madsen, A. L. & Vigre, H., 2016, In : The Journal of Agricultural Science. 154, 4, p. 720-731

Research output: Contribution to journalJournal articleResearchpeer-review

An Approach to Cluster EU Member States into Groups According to Pathways of Salmonella in the Farm‐to‐Consumption Chain for Pork Products

Vigre, H., Coutinho Calado Domingues, A. R., Pedersen, U. B. & Hald, T., 2016, In : Risk Analysis. 36, 3, p. 450-460 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

A Quantitative Microbiological Risk Assessment for Salmonella in Pigs for the European Union

Snary, E. L., Swart, A. N., Simons, R. R. L., Coutinho Calado Domingues, A. R., Vigre, H., Evers, E. G., Hald, T. & Hill, A. A., 2016, In : Risk Analysis. 36, 3, p. 437-449 13 p.

Research output: Contribution to journalJournal articleResearchpeer-review

203 Downloads (Pure)

A sampling and metagenomic sequencing-based methodology for monitoring antimicrobial resistance in swine herds

Munk, P., Dalhoff Andersen, V., de Knegt, L., Jensen, M. S., Knudsen, B. E., Lukjancenko, O., Mordhorst, H., Clasen, J., Agersø, Y., Folkesson, A., Pamp, S. J., Vigre, H. & Aarestrup, F. M., 2016, In : Journal of Antimicrobial Chemotherapy. 72, p. 385-392 8 p., dkw415.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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Characterization of the Human Risk of Salmonellosis Related to Consumption of Pork Products in Different E.U. Countries Based on a QMRA

Vigre, H., Barfoed, K., Swart, A. N., Simons, R. R. L., Hill, A. A., Snary, E. L. & Hald, T., 2016, In : Risk Analysis. 36, 3, p. 531-545 15 p.

Research output: Contribution to journalJournal articleResearchpeer-review

191 Downloads (Pure)

Explanation and Elaboration Document for the STROBE-Vet Statement: Strengthening the Reporting of Observational Studies in Epidemiology - Veterinary Extension

O'Connor, A. M., Sargeant, J. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A. K., Martin, S. W., Nielsen, L. R., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Zoonoses and Public Health. 63, 8, p. 662-698

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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162 Downloads (Pure)

Explanation and Elaboration Document for the STROBE-Vet Statement: Strengthening the Reporting of Observational Studies in Epidemiology-Veterinary Extension

O'Connor, A. M., Sargeant, J. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A. K., Martin, S. W., Nielsen, L., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Journal of Veterinary Internal Medicine. 30, 6, p. 1896–1928 33 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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114 Downloads (Pure)

Methods and processes of developing the Strengthening the Reporting of Observational Studies in Epidemiology - Veterinary (STROBE-Vet) statement

Sargeant, J. M., O'Connor, A. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A. K., Martin, S. W., Nielsen, L. R., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Preventive Veterinary Medicine. 134, p. 188–196 9 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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202 Downloads (Pure)

Methods and processes of developing the Strengthening the Reporting of Observational Studies in Epidemiology - Veterinary (STROBE-Vet) statement

Sargeant, J. M., O'Connor, A. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A. K., Martin, S. W., Nielsen, L. R., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Journal of Swine Health and Production. 24, 6, p. 315-325 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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147 Downloads (Pure)

Methods and Processes of Developing the Strengthening the Reporting of Observational Studies in Epidemiology - Veterinary (STROBE-Vet) Statement

Sargeant, J. M., O'Connor, A. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A., Martin, S. W., Nielsen, L., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Journal of Veterinary Internal Medicine. 30, 6, p. 1887-1895 9 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
128 Downloads (Pure)

Methods and Processes of Developing the Strengthening the Reporting of Observational Studies in Epidemiology - Veterinary (STROBE-Vet) Statement

Sargeant, J. M., O'Connor, A. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A. K., Martin, S. W., Nielsen, L. R., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Zoonoses and Public Health. 63, 8, p. 651–661 11 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
180 Downloads (Pure)

Methods and Processes of Developing the Strengthening the Reporting of Observational Studies in Epidemiology—Veterinary (STROBE-Vet) Statement

Sargeant, J. M., O'Connor, A. M., Dohoo, I. R., Erb, H. N., Cevallos, M., Egger, M., Ersbøll, A. K., Martin, S. W., Nielsen, L. R., Pearl, D. L., Pfeiffer, D. U., Sanchez, J., Torrence, M. E., Vigre, H., Waldner, C. & Ward, M. P., 2016, In : Journal of Food Protection. 79, 12, p. 2211-2219 9 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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The impact of farmers’ participation in field trials in creating awareness and stimulating compliance with the World Health Organization’s farm-based multiple-barrier approach

Amponsah, O., Vigre, H., Schou, T. W., Braimah, I. & Abaidoo, R. C., 2016, In : Environment, Development and Sustainability. 18, 4, p. 1059-1079

Research output: Contribution to journalJournal articleResearchpeer-review

234 Downloads (Pure)

The policy implications of urban open space commercial vegetable farmers' willingness and ability to pay for reclaimed water for irrigation in Kumasi, Ghana

Amponsah, O., Vigre, H., Braimah, I., Schou, T. W. & Abaidoo, R. C., 2016, In : Heliyon. 2, 3, p. e00078 38 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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2015

Assessing low quality water use policy framework: Case study from Ghana

Amponsah, O., Vigre, H., Wilde Schou, T., Boateng, E. S., Braimah, I. & Abaidoo, R. C., 2015, In : Resources, Conservation and Recycling. 97, p. 1-15 15 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Intestinal colonization of broiler chickens by Campylobacter spp. in an experimental infection study

Bahrndorff, S., Garcia Clavero, A. B., Vigre, H., Nauta, M., Heegaard, P. M. H., Madsen, M., Hoorfar, J. & Hald, B., 2015, In : Epidemiology and Infection. 143, 11, p. 2381-2389 9 p.

Research output: Contribution to journalJournal articleResearchpeer-review

The use of third and fourth generation cephalosporins affects the occurrence of extended-spectrum cephalosporinase-producing Escherichia coli in Danish pig herds

Dalhoff Andersen, V., Jensen, V. F., Vigre, H., Andreasen, M. & Agersø, Y., 2015, In : Veterinary Journal. 204, 3, p. 345-350 6 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Towards the production of reliable quantitative microbiological data for risk assessment: Direct quantification of Campylobacter in naturally infected chicken fecal samples using selective culture and real-time PCR

Garcia Clavero, A. B., Vigre, H. & Josefsen, M. H., 2015, In : Food Control. 55, p. 133-140

Research output: Contribution to journalJournal articleResearchpeer-review

2014

Comparison of air samples, nasal swabs, ear-skin swabs and environmental dust samples for detection of Methicillin Resistant Staphylococcus aureus (MRSA) in pig herds

Agersø, Y., Vigre, H., Cavaco, L. & Josefsen, M. H., 2014, In : Epidemiology and Infection. 142, 8, p. 1727-1736

Research output: Contribution to journalJournal articleResearchpeer-review

485 Downloads (Pure)

Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis

Seier-Petersen, M. A., Jasni, A., Aarestrup, F. M., Vigre, H., Mullany, P., Roberts, A. P. & Agersø, Y., 2014, In : Journal of Antimicrobial Chemotherapy. 69, 2, p. 343-348

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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1 Downloads (Pure)

Evaluation of pre-PCR processing approaches for enumeration of Salmonella enterica in naturally contaminated animal feed

Schelin, J., Andersson, G., Vigre, H., Norling, B., Häggblom, P., Hoorfar, J., Rådström, P. & Löfström, C., 2014, In : Journal of Applied Microbiology. 116, 1, p. 167-178

Research output: Contribution to journalJournal articleResearchpeer-review

2013

Direct Quantification of Campylobacter jejuni in Chicken Fecal Samples Using Real-Time PCR: Evaluation of Six Rapid DNA Extraction Methods

Garcia Clavero, A. B., Kamara, J. N., Vigre, H., Hoorfar, J. & Josefsen, M. H., 2013, In : Food Analytical Methods. 6, 6, p. 1728-1738

Research output: Contribution to journalJournal articleResearchpeer-review

207 Downloads (Pure)

In silico and in vitro evaluation of PCR-based assays for the detection of Bacillus anthracis chromosomal signature sequences

Ågren, J., Hamidjaja, R. A., Hansen, T., Ruuls, R., Thierry, S., Vigre, H., Janse, I., Sundström, A., Segerman, B., Koene, M., Löfström, C., Van Rotterdam, B. & Derzelle, S., 2013, In : Virulence. 4, 8, p. 671-685 15 p.

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
File
251 Downloads (Pure)

Integration of Epidemiological Evidence in a Decision Support Model for the Control of Campylobacter in Poultry Production

Garcia Clavero, A. B., Madsen, A. L. & Vigre, H., 2013, In : Agriculture. 3, 3, p. 516-535

Research output: Contribution to journalJournal articleResearchpeer-review

Open Access
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2012

Design and data analysis of experimental trials to test vaccine candidates against zoonotic pathogens in animals: the case of a clinical trial against campylobacter in broilers

Garcia Clavero, A. B., Bahrndorff, S., Hald, B., Hoorfar, J., Madsen, M. & Vigre, H., 2012, In : Expert Review of Vaccines. 11, 10, p. 1179-1188

Research output: Contribution to journalJournal articleResearchpeer-review

Infectious risk factors for individual postweaning multisystemic wasting syndrome (PMWS) development in pigs from affected farms in Spain and Denmark

Grau-Roma, L., Stockmarr, A., Kristensen, C. S., Enøe, C., López-Soria, S., Nofrarías, M., Bille-Hansen, V., Hjulsager, C. K., Sibila, M., Jorsal, S. E., Fraile, L., Baekbo, P., Vigre, H., Segalés, J. & Larsen, L. E., 2012, In : Research in Veterinary Science. 93, 3, p. 1231–1240

Research output: Contribution to journalJournal articleResearchpeer-review

2011
405 Downloads (Pure)

A novel strategy to obtain quantitative data for modelling: Combined enrichment and real-time PCR for enumeration of salmonellae from pig carcasses

Krämer, N., Löfström, C., Vigre, H., Hoorfar, J., Bunge, C. & Malorny, B., 2011, In : International Journal of Food Microbiology. 145, Supplement 1, p. S86-S95

Research output: Contribution to journalJournal articleResearchpeer-review

File

Culture-independent quantification of Salmonella enterica in carcass gauze swabs by flotation prior to real-time PCR

Löfström, C., Schelin, J., Norling, B., Vigre, H., Hoorfar, J. & Rådström, P., 2011, In : International Journal of Food Microbiology. 145, Supplement 1, p. S103-S109

Research output: Contribution to journalJournal articleResearchpeer-review

Herd-level risk factors for antimicrobial demanding gastrointestinal diseases in Danish herds with finisher pigs

Hybschmann, G. K., Ersbøll, A. K., Vigre, H., Baadsgaard, N. P. & Houe, H., 2011, In : Preventive Veterinary Medicine. 98, 3-3, p. 190

Research output: Contribution to journalJournal articleResearchpeer-review

Microarray-based genotyping of Salmonella: Inter-laboratory evaluation of reproducibility and standardization potential

Grønlund, H. A., Riber, L., Vigre, H., Löfström, C., Folling, L., Huehn, S., Malorny, B., Rådström, P., Rudi, K. & Hoorfar, J., Mar 2011, In : International Journal of Food Microbiology. 145, Supplement 1, p. S79-S85

Research output: Contribution to journalJournal articleResearchpeer-review

Seasonal influence on the prevalence of thermotolerant Campylobacter in retail broiler meat in Denmark

Boysen, L., Vigre, H. & Rosenquist, H., 2011, In : Food Microbiology. 28, 5, p. 1028-1032

Research output: Contribution to journalJournal articleResearchpeer-review

Strongyle egg counts in Standardbred trotters: Are they associated with race performance?

Fog, P., Vigre, H. & Nielsen, M. K., 2011, In : Equine Veterinary Journal. 43 Suppl 39, p. 89-92

Research output: Contribution to journalJournal articleResearchpeer-review

2010

10 år efter ophør med anvendelse af antibiotiske vækstfremmere

Aarestrup, F. M., Jensen, V. F., Emborg, H-D., Vigre, H., Jacobsen, E. & Wegener, H. C., 2010, In : Dansk Veterinærtidsskrift. 93, 18, p. 8-13

Research output: Contribution to journalJournal articleResearch

Use of register data to assess the association between use of antimicrobials and outbreak of Postweaning Multisystemic Wasting Syndrome (PMWS) in Danish pig herds

Vigre, H., Dohoo, I. R., Stryhn, H. & Jensen, V. F., 2010, In : Preventive Veterinary Medicine. 93, 2-3, p. 98-109

Research output: Contribution to journalJournal articleResearchpeer-review

Using Outbreak Data for Source Attribution of Human Salmonellosis and Campylobacteriosis in Europe

Pires, S. M., Vigre, H., Makela, P. & Hald, T., 2010, In : Foodborne Pathogens and Disease. 7, 11, p. 1351-1361

Research output: Contribution to journalJournal articleResearchpeer-review

2009

Induction of porcine post-weaning multisystemic wasting syndrome (PMWS) in pigs from PMWS unaffected herds following mingling with pigs from PMWS-affected herds

Kristensen, C. S., Bækbo, P., Bille-Hansen, V., Bøtner, A., Vigre, H., Enøe, C. & Larsen, L. E., 2009, In : Veterinary Microbiology. 138, p. 244-250

Research output: Contribution to journalJournal articleResearchpeer-review

2008

Postweaning multisystematic wasting syndrome in Danish pig herds: productivity, clinical signs and pathology

Okholm Nielsen, E., Enøe, C., Jorsal, S. E. L., Barfod, K., Svensmark, B., Bille-Hansen, V., Vigre, H., Bøtner, A. & Baekbo, P., 2008, In : Veterinary Record. 162, 16, p. 505-508

Research output: Contribution to journalJournal articleResearchpeer-review

Post-weaning multisystemic wasting syndrome (PMWS) in Danish pig herds: productivity, clinical symptoms, and pathology

Nielsen, E. O., Enøe, C., Jorsal, S. E. L., Barfod, K., Svensmark, B., Bille-Hansen, V., Vigre, H., Bøtner, A. & Bækbo, P., 2008, In : Veterinary Record. 162, 16, p. 505-508

Research output: Contribution to journalJournal articleResearchpeer-review

Seneste udvikling antibiotikaforbruget til dyr i Danmark

Vigre, H. & Jensen, V. F., 2008, In : Dansk Veterinærtidsskrift. 91, 3, p. 10 - 14

Research output: Contribution to journalJournal articleResearchpeer-review

The effect of discontinued use of antimicrobial growth promoters on the risk of therapeutic antibiotic treatment in Danish farrow-to-finish pig farms

Vigre, H., Larsen, P. B., Andreasen, M., Christensen, J. & Jorsal, S. E. L., 2008, In : Epidemiology and Infection. 136, 1, p. 92-107

Research output: Contribution to journalJournal articleResearchpeer-review

2007

Molecular and phylogenetic characterization of Cryptosporidium and Giardia from pigs and cattle in Denmark

Langkjær, R. B., Vigre, H., Enemark, H. L. & Maddox-Hyttel, C., 2007, In : Parasitology. 134, p. 339-350

Research output: Contribution to journalJournal articleResearchpeer-review