Publications per year
Publications per year
- 27 results
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2024
A novel metagenomic approach uncovers phage genes as markers for increased disinfectant tolerance in mixed Listeria monocytogenes communities
Karlsmose, A. K., Ivanova, M., Kragh, M. L., Kjeldgaard, J. S., Otani, S., Svendsen, C. A., Papić, B., Zdovc, I., Tasara, T., Stephan, R., Heir, E., Langsrud, S., Møretrø, T., Dalgaard, P., Fagerlund, A., Hansen, L. T., Aarestrup, F. M. & Leekitcharoenphon, P., 2024, In: Infection, Genetics and Evolution. 119, 12 p., 105582.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile18 Downloads (Pure) -
2023
Evaluation and validation of laboratory procedures for the surveillance of ESBL-, AmpC-, and carbapenemase-producing Escherichia coli from fresh meat and caecal samples
Hendriksen, R. S., Cavaco, L. M., Guerra, B., Bortolaia, V., Agersø, Y., Svendsen, C. A., Nielsen, H. N., Kjeldgaard, J. S., Pedersen, S. K., Fertner, M. & Hasman, H., 2023, In: Frontiers in Microbiology. 14, 15 p., 1229542.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile24 Downloads (Pure) -
2022
Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance
Munk, P., Brinch, C., Møller, F. D., Petersen, T. N., Hendriksen, R. S., Seyfarth, A. M., Kjeldgaard, J. S., Svendsen, C. A., van Bunnik, B., Berglund, F., Global, S. S. C. (Member of author collaboration), Larsson, D. G. J., Koopmans, M., Woolhouse, M. & Aarestrup, F. M., 2022, In: Nature Communications. 13, 1, 16 p., 7251.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile85 Downloads (Pure) -
2021
Co-localization of carbapenem (blaOXA-162) and colistin (mcr-1) resistance genes on a transferable IncHI2 plasmid in Escherichia coli of chicken origin
Bortolaia, V., Ronco, T., Romascu, L., Nicorescu, I., Milita, N. M., Vaduva, A. M., Leekitcharoenphon, P., Kjeldgaard, J. S., Hansen, I. M., Svendsen, C. A., Mordhorst, H., Guerra, B., Beloeil, P.-A., Hoffmann, M. & Hendriksen, R. S., 2021, In: Journal of Antimicrobial Chemotherapy. 76, 11, p. 3063-3065 3 p., dkab285.Research output: Contribution to journal › Letter › peer-review
Open AccessFile67 Downloads (Pure) -
2020
Draft Genome Sequences of Lactococcus lactis Strains MS22314, MS22333, MS22336, and MS22337, Isolated from Fermented Camel Milk in Ethiopia
Bragason, E., Svendsen, C. A., Guya, M. E., Berhe, T. & Hansen, E. B., 2020, In: Microbiology Resource Announcements. 9, 47, 2 p., e00862-20.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile89 Downloads (Pure) -
Long-Term Temporal Stability of the Resistome in Sewage from Copenhagen
Brinch, C., Leekitcharoenphon, P., Duarte, A. S. R., Svendsen, C. A., Jensen, J. D. & Aarestrup, F. M., 2020, In: mSystems. 5, 5, 10 p., e00841-20.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile94 Downloads (Pure) -
2019
Cross-Border Transmission of Salmonella Choleraesuis var. Kunzendorf in European Pigs and Wild Boar: Infection, Genetics, and Evolution
Leekitcharoenphon, P., Sørensen, G., Lofstrom, C., Battisti, A., Szabo, I., Wasyl, D., Slowey, R., Zhao, S., Brisabois, A., Kornschober, C., Karssin, A., Szilard, J., Cerny, T., Svendsen, C. A., Pedersen, K., Aarestrup, F. M. & Hendriksen, R. S., 2019, In: Frontiers in Microbiology. 10, 12 p., 179.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile364 Downloads (Pure) -
2018
Direct whole-genome sequencing of Plasmodium falciparum specimens from dried erythrocyte spots
Nag, S., Kofoed, P. E., Ursing, J., Lemvigh, C. K., Allesøe, R. L., Rodrigues, A., Svendsen, C. A., Jensen, J. D., Alifrangis, M., Lund, O. & Møller Aarestrup, F., 23 Feb 2018, In: Malaria Journal. 17, 1, 8 p., 91.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile537 Downloads (Pure) -
2016
Selective enrichment of ESBL, AmpC and carbapenemase producing E. coli in meat and cecal samples - additional validation for poultry samples
Cavaco, L., Hendriksen, R. S., Agersø, Y., Svendsen, C. A., Nielsen, H., Guerra, B., Peran, R. & Hasman, H., 2016. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
Open AccessFile616 Downloads (Pure) -
2015
Evaluation of methods for enrichment of carbapenemase-producing E. coli in pork meat and cecal samples of porcine and bovine origin: EV0266
Hasman, H., Agersø, Y., Cavaco, L., Svendsen, C. A., Nielsen, H., San Jose, M., Fisher, J., Schmoger, S., Rosa, P. & Guerra, B., 2015. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
Open AccessFile222 Downloads (Pure) -
Genomic Signature of Multidrug-Resistant Salmonella enterica Serovar Typhi Isolates Related to a Massive Outbreak in Zambia between 2010 and 2012.
Hendriksen, R. S., Leekitcharoenphon, P., Lukjancenko, O., Lukwesa-Musyani, C., Tambatamba, B., Mwaba, J., Kalonda, A., Nakazwe, R., Kwenda, G., Jensen, J. D., Svendsen, C. A., Dittmann, K. K., Kaas, R. S., Cavaco, L., Aarestrup, F. M., Hasman, H. & Mwansa, J. C. L., 2015, In: Journal of Clinical Microbiology. 53, 1, p. 262-272 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
1 Downloads (Pure) -
Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance
Petersen, T. N., Rasmussen, S., Hasman, H., Carøe, C., Bælum, J., Schultz, A. C., Bergmark, L., Svendsen, C. A., Lund, O., Sicheritz-Pontén, T. & Aarestrup, F. M., 2015, In: Scientific Reports. 5, 9 p., 11444.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile609 Downloads (Pure) -
Validation of methods for enrichment of ESBL and AmpC producing E. coli in meat and cecal samples: P0995
Hasman, H., Agersø, Y., Cavaco, L., Svendsen, C. A., San Jose, M., Fisher, J., Schmoger, S., Jahn, S., Guerra, B. & Peran, R., 2015. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
Open AccessFile321 Downloads (Pure) -
2014
Emergence and clonal dissemination of Salmonella enterica serovar Enteritidis causing salmonellosis in Mauritius
Issack, M. I., Hendriksen, R. S., Hyytiae-Trees, E., Svendsen, C. A. & Mikoleit, M., 2014, In: Journal of Infection in Developing Countries. 8, 4, p. 454-460Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile550 Downloads (Pure) -
Extended-Spectrum-Beta-Lactamases, AmpC Beta-Lactamases and Plasmid Mediated Quinolone Resistance in Klebsiella spp. from Companion Animals in Italy
Donati, V., Feltrin, F., Hendriksen, R. S., Svendsen, C. A., Cordaro, G., Garcia-Fernandez, A., Lorenzetti, S., Lorenzetti, R., Battisti, A. & Franco, A., 2014, In: PLOS ONE. 9, 3, e90564.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile842 Downloads (Pure) -
Rapid Whole-Genome Sequencing for Detection and Characterization of Microorganisms Directly from Clinical Samples (vol 52, pg 139, 2014)
Hasman, H., Saputra, D., Sicheritz-Pontén, T., Lund, O., Svendsen, C. A., Frimodt-Møller, N. & Aarestrup, F. M., 2014, In: Journal of Clinical Microbiology. 52, 8, p. 3136-3136 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
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Rapid whole genome sequencing for the detection and characterization of microorganisms directly from clinical samples.
Hasman, H., Saputra, D., Sicheritz-Pontén, T., Lund, O., Svendsen, C. A., Frimodt-Møller, N. & Aarestrup, F. M., 2014, In: Journal of Clinical Microbiology. 52, 1, p. 139-146Research output: Contribution to journal › Journal article › Research › peer-review
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2013
Dissemination of clonal Salmonella enterica serovar Typhimurium isolates causing salmonellosis in Mauritius
Issack, M. I., Migura, L. G., Ramsamy, V. D., Svendsen, C. A., Pornruangwong, S., Pulsrikarn, C. & Hendriksen, R. S., 2013, In: Foodborne Pathogens and Disease. 10, 7, p. 618-623Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile571 Downloads (Pure) -
Genomics of an emerging clone of Salmonella serovar Typhimurium ST313 from Nigeria and the Democratic Republic of Congo.
Leekitcharoenphon, P., Rundsten, C. F., Zankari, E., Svendsen, C. A., Price, L. B., Rahmani, M., Fresno, A. H., Fashae, K., Vandenberg, O., Aarestrup, F. M. & Hendriksen, R. S., 2013, In: Journal of Infection in Developing Countries. 7, 10, p. 696-706Research output: Contribution to journal › Journal article › Research › peer-review
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Molecular clonality and antimicrobial resistance in Salmonella enterica serovars Enteritidis and Infantis from broilers in three Northern regions of Iran
Rahmani, M., Peighambari, S. M., Svendsen, C. A., Cavaco, L., Agersø, Y. & Hendriksen, R. S., 2013, In: B M C Veterinary Research. 9, 1, 9 p., 66.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile451 Downloads (Pure) -
Occurrence of Listeria spp. in retail meat and dairy products in the area of Addis Ababa, Ethiopia.
Derra, F. A., Karlsmose, S., Monga, D. P., Mache, A., Svendsen, C. A., Felix, B., Granier, S. A., Geyid, A., Taye, G. & Hendriksen, R. S., 2013, In: Foodborne Pathogens and Disease. 10, 6, p. 577-579Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile828 Downloads (Pure) -
The first attempt of an active integrated laboratory‐based Salmonella surveillance programme in the north‐eastern region of Nigeria
Raufu, I., Bortolaia, V., Svendsen, C. A., Ameh, J. A., Ambali, A. G., Aarestrup, F. M. & Hendriksen, R. S., 2013, In: Journal of Applied Microbiology. 115, 4, p. 1059-1067Research output: Contribution to journal › Journal article › Research › peer-review
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2012
Antimicrobial-resistant Shigella infections from Iran: an overlooked problem?
Tajbakhsh, M., García Migura, L., Rahbar, M., Svendsen, C. A., Mohammadzadeh, M., Zali, M. R., Aarestrup, F. M. & Hendriksen, R. S., 2012, In: Journal of Antimicrobial Chemotherapy. 67, 5, p. 1128-1133Research output: Contribution to journal › Journal article › Research › peer-review
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Characterization of Isolates of Salmonella enterica Serovar Stanley, a Serovar Endemic to Asia and Associated with Travel
Hendriksen, R. S., Le Hello, S., Bortolaia, V., Pulsrikarn, C., Nielsen, E. M., Pornruangmong, S., Chaichana, P., Svendsen, C. A., Weill, F.-X. & Aarestrup, F. M., 2012, In: Journal of Clinical Microbiology. 50, 3, p. 709-720Research output: Contribution to journal › Journal article › Research › peer-review
2 Downloads (Pure) -
Characterization of Salmonella enterica serovar Enteritidis isolates recovered from blood and stool specimens in Thailand
Hendriksen, R. S., Hyytia-Trees, E., Pulsrikarn, C., Pornruangwong, S., Chaichana, P., Svendsen, C. A., Ahmed, R. & Mikoleit, M., 2012, In: B M C Microbiology. 12, 92, 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile308 Downloads (Pure) -
SCCmec Type IX Element in Methicillin Resistant Staphylococcusaureusspa Type t337 (CC9) Isolated from Pigs and Pork in Thailand
Vestergaard, M., Cavaco, L. M., Sirichote, P., Unahalekhaka, A., Dangsakul, W., Svendsen, C. A., Aarestrup, F. M. & Hendriksen, R. S., 2012, In: Frontiers in Microbiology. 3, p. Article 103 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile378 Downloads (Pure) -
2008
Relevance of hot spots in the evolution and transmission of Tn1546 in glycopeptide-resistant Enterococcus faecium (GREF) from broiler origin
Migura, L. G., Hasman, H., Svendsen, C. A. & Jensen, L. B., 2008, In: Journal of Antimicrobial Chemotherapy. 62, 4, p. 681-687Research output: Contribution to journal › Journal article › Research › peer-review