DTU Microbes Initiative

Projects

Projects per year 2016 2018 2019 2020 2021 2022 2023 2024 2030

• 1 Not started
• 311 Active
• 399 Finished

Projects per year

Search results

• Active

  Study of the yeast transportome

  Zhang, Y. (PhD Student), Borodina, I. (Main Supervisor) & Stanchev, L. D. K. (Supervisor)

  15/03/2024 → 14/03/2027

  Project: PhD

• Transforming Natural Product Discovery Using AI/ML Method

  Larsen, N. J. (PhD Student), Blin, K. (Main Supervisor) & Frellsen, J. (Supervisor)

  15/03/2024 → 14/03/2027

  Project: PhD

• Unspecific Peroxygenases and their oxidative activity towards lignin

  Sunding, S. T. (PhD Student), Agger, J. W. (Main Supervisor), Perna, V. N. (Supervisor) & Silva, C. D. O. G. (Supervisor)

  15/03/2024 → 14/03/2027

  Project: PhD

• Metabonomics-based Mapping of Bacterial Secondary Metabolites and their Biotransformations in Natural Settings

  Skoven, C. D. (PhD Student), Gotfredsen, C. H. (Main Supervisor) & Gram, L. (Supervisor)

  15/03/2024 → 14/03/2027

  Project: PhD

• WateResist: Role of water used in the growing, handling and processing of fruits, vegetables and herbs on the spread of antimicrobial resistance - WateResist

  Andrea, A. (PI), Hendriksen, R. S. (PI), Kjeldgaard, J. S. (Project Participant), Helwigh, B. (Project Participant), Pedersen, S. K. (Project Participant) & Sørensen, L. H. (Project Participant)

  05/03/2024 → 15/04/2027

  Project: Research

  • Role of Water 100%
  • Antimicrobial Resistance 100%
  • Fruit Vegetables 100%
  • Herbs 100%
  • Fruit Vegetable 100%

• New polarizing agents for Dynamic Nuclear Polarization

  Riis, R. (PhD Student), Ardenkjær-Larsen, J. H. (Main Supervisor), Clausen, M. H. (Supervisor) & Lohse, A. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• Design and characterization of novel T-cell-receptor-like minibinders

  Scapolo, B. (PhD Student), Hadrup, S. R. (Main Supervisor), Jenkins, T. P. (Supervisor), Johansen, K. H. (Supervisor) & Nielsen, M. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• Functional Microbiome of Africa

  Jensen, E. E. B. (PhD Student), Aarestrup, F. M. (Main Supervisor) & Otani, S. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• Streptomyces systems biology and fermentation

  Brockmann, S. (PhD Student), Weber, T. (Main Supervisor) & Yang, L. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• ENFACE: A tool for prediction of enzyme stability at gas-liquid interfaces based on computational methods

  Høvring, J. F. (PhD Student), Peters, G. H. J. (Main Supervisor), Woodley, J. (Supervisor) & Brask, J. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• Metabolic engineering of yeast cell factories for the production of natural food colors

  Mohr, I. L. (PhD Student), Borodina, I. (Main Supervisor) & Babaei, M. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• Multi-scale modelling, simulation, control and optimisation for sustainable SCP production

  Carstensen, P. E. (PhD Student), Jørgensen, J. B. (Main Supervisor), Gernaey, K. V. (Supervisor), Groves, T. (Supervisor), Krühne, U. (Supervisor) & Nielsen, L. K. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

  • Food Security 100%
  • Multiscale Modeling 100%
  • Multiscale Simulation 100%
  • Mechanistic Model 100%
  • Simulation Control 100%

• Metagenomic Approaches to Assess the Secondary Metabolome of Soil Bacteria

  Faurdal, D. L. (PhD Student), Weber, T. (Main Supervisor) & Strube, M. L. (Supervisor)

  01/03/2024 → 28/02/2027

  Project: PhD

• Biomolecule Production Mapping via Biosynthesis using Quantum Generative Artificial Intelligence

  Kailasanathan, R. (PhD Student), Mansouri, S. S. (Main Supervisor), Garg, S. (Supervisor), Sin, G. (Supervisor) & Sivaram, A. (Supervisor)

  15/02/2024 → 14/02/2027

  Project: PhD

• Utilization of fish side-streams for production of novel food ingredients

  Corsano, S. (PhD Student), Jacobsen, C. (Main Supervisor) & Sørensen, A.-D. M. (Supervisor)

  15/02/2024 → 14/02/2027

  Project: PhD

• Combating Campylobacter across the broiler production chain: A One Health Perspective

  Fernández, C. C. (PhD Student), Lassen, B. (Main Supervisor), Takeuchi-Storm, N. (Supervisor) & Herrero, A. F. (Supervisor)

  01/02/2024 → 31/01/2027

  Project: PhD

  • Modified Atmosphere 100%
  • Campylobacter 100%
  • Broiler Meat 100%
  • Yeast Fermentate 100%
  • Oat Hulls 100%

• Using medium usage rate for rational designof mammalian cell culture mediums and devices

  Wildfang, L. M. (PhD Student), Dufva, M. (Main Supervisor) & Jensen, P. R. (Supervisor)

  01/02/2024 → 31/01/2027

  Project: PhD

• PanKB: Advancing Biotechnology with Pangenomics

  Sun, B. (PhD Student), Santos Delgado, A. (Main Supervisor), Phaneuf, P. V. (Supervisor), Winther, O. (Supervisor) & Palsson, B. O. (Supervisor)

  01/02/2024 → 31/01/2027

  Project: PhD

• New polarizing agents for Dynamic Nuclear Polarization

  Haidar, A. K. (PhD Student), Ardenkjær-Larsen, J. H. (Main Supervisor), Clausen, M. H. (Supervisor) & Lohse, A. (Supervisor)

  15/01/2024 → 14/01/2027

  Project: PhD

• Development of Broad-host range molecular tools

  Will, Á. D. A. (PhD Student) & Jensen, S. I. (Main Supervisor)

  15/01/2024 → 14/01/2027

  Project: PhD

• Digital Quality by Design with model-baseddesign of experiment

  Valdeira Caetano, A. H. (PhD Student), Gernaey, K. V. (Main Supervisor) & Kager, J. (Supervisor)

  15/01/2024 → 14/01/2027

  Project: PhD

• Sustainable biocidal treatments for inactivation of norovirus for improved public health

  Lassen, S. (PhD Student), Hansen, L. T. (Main Supervisor), Herrero-Fresno, A. (Supervisor) & Kragh, M. L. (Supervisor)

  15/01/2024 → 14/01/2027

  Project: PhD

• HjertFisk: Improved knowledge and management of a new cockle fishery in the Limfjorden (113494)

  Seabra de Freitas, P. (PI), Saurel, C. (Project Participant), Petersen, J. K. (Project Participant), Madsen, L. (Project Participant), Lindegren, M. (Project Participant) & Olsen, J. (Project Participant)

  11/01/2024 → 11/01/2027

  Project: Research

  • Fisheries 100%
  • Limfjorden 100%
  • Cockle 100%
  • Fishery-independent Data 28%
  • Stock Assessment 28%

• Metagenome-based Metabolic Modeling for Green transition of Water Treatment – application to Methanotrophy

  Pierrelée, M. (Project Participant), Simonic, A. (PhD Student), Savio, F. (PhD Student) & Valverde Pérez, B. (PI)

  02/01/2024 → …

  Project: Research

  • Methanotrophy 100%
  • Water Treatment Process 100%
  • Metabolic Model 100%
  • Environmental Biotechnology 100%
  • Metagenome 100%

• EEnzym: A new approach to laccase discovery from the sea

  Wünsch, U. (PI) & Stedmon, C. (PI)

  01/01/2024 → …

  Project: Research

  • Laccase 100%
  • Renewable Resource 100%
  • Microbial Community 100%
  • Low-Temperature 50%
  • Aromatics 50%

• Mammalian cell engineering to overcome the cell density effect in the production of recombinant adeno-associated viruses (rAAVs)

  Rahimi, M. (PhD Student), Nielsen, L. K. (Main Supervisor) & García, J. L. (Supervisor)

  01/01/2024 → 31/12/2026

  Project: PhD

• NAPRAS: Effective nitrogen and phosphorous removal in recirculation aquaculture systems (113491)

  Letelier-Gordo, C. O. (PI) & Aalto, S.-L. H. (Project Participant)

  01/01/2024 → 31/05/2026

  Project: Research

  • Nitrogen Removal 100%
  • Phosphorous Removal 100%
  • Recirculating Aquaculture System 100%
  • Aquaculture System 100%
  • Recirculating Aquaculture Systems 100%

• Generative AI and Machine Learning for Protein Design and Optimization

  Funk, J. (PhD Student), Acevedo-Rocha, C. G. (Supervisor) & Jenkins, T. P. (Main Supervisor)

  01/01/2024 → 31/12/2026

  Project: PhD

• Elucidating the mechanisms behind acidification phenotype differences at small and large scale

  Laforce, I. N. (PhD Student), Hansen, E. B. (Main Supervisor), Bang-Berthelsen, C. H. (Supervisor), Poulsen, V. K. (Supervisor) & Harlé, O. (Supervisor)

  01/01/2024 → 31/12/2026

  Project: PhD

• ILLUQ. PERMAFROST – POLLUTION - HEALTH

  Jensen, P. E. (PI), Ingeman-Nielsen, T. (PI), Hansen, L. T. (PI), De Ville, T. (PhD Student) & Knøfler, I. H. (PhD Student)

  01/01/2024 → 31/12/2027

  Project: Research

  • Permafrost Thaw 100%
  • Permafrost 100%
  • Pollution 100%
  • Climate Change 100%
  • Wellbeing 100%

• Valorization of the C1-fraction from processed lignin by engineered Pseudomonas putida

  Christensen, E. Ø. (PhD Student), Nikel, P. I. (Main Supervisor) & Volke, D. C. (Supervisor)

  01/12/2023 → 30/11/2026

  Project: PhD

• Data-driven investigation of mechanisms that underlie secondary metabolite biosynthesis in Actinomycetes¿

  Svetlova, A. (PhD Student), Charusanti, P. (Main Supervisor) & Ding, L. (Supervisor)

  01/12/2023 → 30/11/2026

  Project: PhD

• Developing new computational graph-based methods for genomics level only and genomic and metabolic data types for natural product discovery

  Kronborg Cantalapiedra, C. (PhD Student), Garg, S. (Main Supervisor) & Jensen, E. D. (Supervisor)

  01/12/2023 → 30/11/2026

  Project: PhD

• Interpersonal temporal dynamics of group interaction

  He, H. (PhD Student), Konvalinka, I. (Main Supervisor), Ahrens, A. (Supervisor) & Clemmensen, L. K. H. (Supervisor)

  15/11/2023 → 14/11/2026

  Project: PhD

  • Temporal Dynamics 100%
  • Group Interaction 100%
  • Sensation of Hearing 100%
  • Multimodal Signals 50%
  • Out of Sync 50%

• Biotechnologies for mitigation of agricultural pollution in groundwater

  Simonic, A. (PhD Student), Valverde Pérez, B. (Main Supervisor) & Dechesne, A. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

• Absolute Sustainability of Natural Resource Use

  Dudka, K. M. (PhD Student), Owsianiak, M. (Main Supervisor) & Hauschild, M. Z. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

  • Natural Resource Sustainability 100%
  • Absolute Sustainability 100%
  • Natural Resource Use 100%
  • Resource Use 100%
  • Natural Resources 100%

• DTI-J Chemical and Biochemical Engineering

  Pazo Vila, A. (PhD Student), Huusom, J. K. (Main Supervisor), Gernaey, K. V. (Supervisor), Norkser, N. H. (Supervisor) & Shavit, R. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

• Fleming Fund, Regional Grant, EQAsia, Phase II

  Rasmussen, L. B. (Project Manager), Hendriksen, R. S. (PI), Kostyanev, T. S. (Project Coordinator), Almir, H. (Project Coordinator), Tosun, E. S. (Other), Johansson, S. M. (Other) & Svendsen, L. (Other)

  01/11/2023 → 31/12/2025

  Project: Research

  • One Health 100%
  • Antimicrobial Resistance 83%
  • Antibiotic Resistance 63%
  • Diagnostic Microbiology 50%
  • COVID-19 50%

• High-througput metabolic engineering of oleaginous yeast Yarrowia lipolytica

  Wang, S. (PhD Student), Borodina, I. (Main Supervisor) & Jiang, W. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

• Enzymatic electrobiocatalysis for CO2 conversion for Power2X

  Christensen, J. R. (PhD Student), Meyer, A. S. (Main Supervisor) & Morth, J. P. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

• Novel nucleic acid analogues with strained nucleobases

  Oettinger, C. (PhD Student), Astakhova, K. (Main Supervisor) & Duus, J. Ø. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

• Development of methodology to track and solve microbialissues in the dairy industry

  Piccini, V. (PhD Student), Hansen, L. T. (Main Supervisor), Kragh, M. L. (Supervisor) & Xiao, Y. (Supervisor)

  01/11/2023 → 31/10/2026

  Project: PhD

• Circumventing conventional microbiology and shipping constringes by testing the concept of timed field sequencing and data sharing for bioterrorism preparedness

  Chang, E. D. (Project Manager), Hendriksen, R. S. (PI), Kjeldgaard, J. S. (Project Manager), Lacy-Roberts, N. (Project Participant) & Odgaard, C. (Other)

  01/10/2023 → 31/05/2025

  Project: Research

  • Bioterrorism Preparedness 100%
  • Conventional Microbiology 100%
  • Data Sharing 100%
  • Microbiology 100%
  • DNA Sequence 100%

• Mathematical modelling for digital twins of fermentation processes

  Lemperle, M. (PhD Student), Gernaey, K. V. (Main Supervisor), Kager, J. (Supervisor), Ramin, P. (Supervisor), Cassells, B. (Supervisor) & Stocks, S. M. (Supervisor)

  01/10/2023 → 30/09/2026

  Project: PhD

• Glycoengineering of iPSC-NK cells

  Chen, J. (PhD Student), Goletz, S. (Main Supervisor) & Tian, W. (Supervisor)

  01/10/2023 → 30/09/2026

  Project: PhD

• Large-scale Genome Mining for Streptomyces BGCs (DC6)

  Damas Ramos, L. C. (PhD Student), Weber, T. (Main Supervisor) & Cruz-Morales, P. (Supervisor)

  01/10/2023 → 30/09/2026

  Project: PhD

• Molecular mechanisms and ecological impact of TDA-mediated bacterial interactions

  Alfastsen, L. (PhD Student), Gram, L. (Main Supervisor) & Zhang, S. (Supervisor)

  01/10/2023 → 30/09/2026

  Project: PhD

• EQAFRICA: Establishing an External Quality assessment programme for Africa

  Hendriksen, R. S. (PI), Pedersen, S. K. (Project Participant), Odgaard, C. (Other) & Rasmussen, L. B. (Project Participant)

  01/10/2023 → 31/12/2025

  Project: Research

  • Africa 100%
  • National Capacity 100%
  • Regional Challenges 100%
  • Antimicrobial Susceptibility 100%
  • External Quality Assessment 100%

• SeqAfrica: FF134-533: Fleming Fund Regional Grant Set 1 SEQAFRICA

  Nilsson, P. (Project Manager), Gibson, C. T. (Project Manager), Hendriksen, R. S. (PI), Odgaard, C. (Other), Lacy-Roberts, N. (Project Participant), Thornval, N. R. (PhD Student), Helwigh, B. (CoPI), Egyir, B. (Collaborative Partner), Smith, A. (Collaborative Partner) & Dieye, Y. (Collaborative Partner)

  01/10/2023 → 31/12/2025

  Project: Research

  • AMR Surveillance 100%
  • Regional Grant 100%
  • Bioinformatics 100%
  • Amoxicillin Plus Clavulanic Acid 100%
  • Genome Sequencing 100%

• Phenotypic profiling and therapeutic applications of sterol transport protein inhibitors

  Madsen, M. L. (PhD Student), Laraia, L. (Main Supervisor) & Clausen, M. H. (Supervisor)

  01/10/2023 → 30/09/2026

  Project: PhD