DTU Microbes Initiative

Projects

Projects per year 2016 2018 2019 2020 2021 2022 2023 2024 2030

• 1 Not started
• 311 Active
• 399 Finished

Projects per year

Search results

• Active

  Applying NGS in the epidemiology of foodborne infections

  Thystrup, C. A. N. (PhD Student), Hald, T. (Main Supervisor), Njage, P. M. K. (Supervisor), Petersen, T. N. (Supervisor) & Pires, S. M. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• Exploring Bioflourination

  Sako, A. S. (PhD Student), Welner, D. H. (Main Supervisor) & Nikel, P. I. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• Engineering Pseudomonas putida for the production of high-value polymers from C1 substrates

  Alvan Vargas, M. V. G. (PhD Student), Nikel, P. I. (Main Supervisor) & Nielsen, L. K. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• Towards methylotrophy of P. putida KT2440: Quest for a sustainable circular bioeconomy from one-carbon molecules

  Puiggené González, O. (PhD Student), Nikel, P. I. (Main Supervisor) & Nielsen, L. K. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• Polymeric protein production using microbes for future foods application

  Alexiou, A. (PhD Student), Mijakovic, I. (Main Supervisor) & Yang, L. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• Managing syntrophic microbial interactions in anaerobic digestion for enhanced Methane production

  Vayena, G. (PhD Student), Angelidaki, I. (Main Supervisor) & Ghofrani-Isfahani, P. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• A versatile TXTL-based ultra-high-throughput directed evolution platform by coupled fluorescent protein synthesis

  Bozkurt, E. U. (PhD Student), Nikel, P. I. (Main Supervisor) & Volke, D. C. (Supervisor)

  01/08/2022 → 31/07/2025

  Project: PhD

• Massively multiplex pathogen screening by ultrasensitive fluorescence spectroscopy

  Xiao, S. (PI), Sun, Y. (CoI), Beliaev, L. (Project Participant), Islam, S. F. (Project Participant) & Tellez, R. H. C. (Project Participant)

  01/07/2022 → 30/06/2025

  Project: Research

• Bacterial kidney disease in rainbow trout, with focus ininfection kinetics and molecular tracing of Renibacteriumsalmoninarum in Denmark

  Alonso, A. V. (PhD Student), Cuenca, A. (Main Supervisor), Madsen, L. (Supervisor) & Vendramin, N. (Supervisor)

  01/07/2022 → 30/06/2025

  Project: PhD

• Fluorescence microscopy for in-depth insights into microbial adaptations at a single-cell level

  Della Rosa, M. E. (PhD Student), Krühne, U. (Supervisor), Kilstrup, M. (Main Supervisor) & Morth, J. P. (Supervisor)

  01/07/2022 → 30/06/2025

  Project: PhD

• Early warning for disease: improving aquaculturemonitoring with real-time microbiome sequencing

  Zarantonello, G. (PhD Student), Cuenca, A. (Main Supervisor), Madsen, L. (Supervisor) & Petersen, T. N. (Supervisor)

  01/07/2022 → 30/06/2025

  Project: PhD

• Modelling bioprocess production improvements

  Antimanon, S. (PhD Student), Woodley, J. (Main Supervisor), Junicke, H. (Supervisor), Hauer, B. (Examiner), Ödman, P. (Examiner) & Jensen, S. I. (Supervisor)

  01/07/2022 → 30/06/2025

  Project: PhD

• Pickering emulsions with omega-3 fatty acids for food applications

  Tran, H. T. (PhD Student), Jacobsen, C. (Main Supervisor), Chronakis, I. (Supervisor), Mendes, A. C. L. (Supervisor), Svensson, B. Y. (Supervisor), Garcia-Moreno, P. (Examiner) & Larsen, M. A. (Examiner)

  01/07/2022 → 21/07/2025

  Project: PhD

• Blue mussel bed dynamics in coastal areas

  Johansson, I. (PhD Student), Nielsen, P. (Main Supervisor), Saurel, C. (Supervisor) & Taylor, D. (Supervisor)

  15/06/2022 → 11/10/2025

  Project: PhD

• Sustainable Production of Microalgae Proteinsand other Bioactive Compounds

  Gundersen, E. (PhD Student), Jacobsen, C. (Main Supervisor), Holdt, S. L. (Supervisor) & Jakobsen, J. (Supervisor)

  15/06/2022 → 20/09/2025

  Project: PhD

• Genomes and genes

  Kraft, L. (PhD Student), Renaud, G. (Main Supervisor) & Fernandez-Guerra , A. (Supervisor)

  15/06/2022 → 14/06/2025

  Project: PhD

• Intensification of recombinant protein production for efficient scale-up

  Nielsen, M. B. (PhD Student), Meyer, A. S. (Main Supervisor), Ruiz, J. L. M. (Supervisor), Nagy, T. (Supervisor) & Arnau, J. (Supervisor)

  01/06/2022 → 31/05/2025

  Project: PhD

• Experimental design for actinomycete engineering

  Møller, T. A. (PhD Student), Weber, T. (Main Supervisor), Booth, T. J. (Supervisor) & Frandsen, R. J. N. (Supervisor)

  01/06/2022 → 07/03/2026

  Project: PhD

• Applying advanced HT technologies and adaptive laboratory evolution to identify commonevolution patterns across yeast species in industrial production environments

  Torres Montero, P. (PhD Student), Ruiz, J. L. M. (Main Supervisor), Feist, A. (Supervisor) & Worberg, A. (Supervisor)

  01/06/2022 → 31/05/2025

  Project: PhD

• Exploring enterococci - From biofilm forming pathogens to safe food microorganisms

  Tadesse, B. T. (PhD Student), Solem, C. (Main Supervisor), Jers, C. (Supervisor) & Mijakovic, I. (Supervisor)

  01/06/2022 → 31/05/2025

  Project: PhD

• Imaginative Philosophy for Science Outreach

  More, C. V. (PI), Pamp, S. J. (Approving Authority) & Nielsen, D. P. (Approving Authority)

  01/06/2022 → …

  Project: Consultancy

  • Science Outreach 100%
  • Microbes 100%
  • Dialog 100%
  • Literature 100%
  • Outreach 100%

• Expanding the bioprospecting catalogue of Earth¿s microbiomes through the improvement of microbial cultivation

  Nita, I. (PhD Student), Bentzon-Tilia, M. (Main Supervisor), Dechesne, A. (Supervisor), R. Duncan, K. (Examiner) & Schramm, A. (Examiner)

  15/05/2022 → 14/05/2025

  Project: PhD

• Extraction and utilization of brewers¿ spent grain proteins

  Mikkelsen, R. K. (PhD Student), Jacobsen, C. (Main Supervisor), Hobley, T. J. (Supervisor), Jafarpour, A. (Supervisor), Svensson, B. Y. (Supervisor), Jacobsen, C. (Main Supervisor), Hobley, T. J. (Supervisor), Jafarpour, A. (Supervisor), Svensson, B. Y. (Supervisor), Hennebelle, M. (Examiner) & Lübeck, M. (Examiner)

  15/05/2022 → 14/05/2025

  Project: PhD

• GRAINPEP: Extraction and utilization of brewers spent grain proteins

  Sales Queiroz, L. (Supervisor), Mikkelsen, R. K. (PhD Student), Jacobsen, C. (Main Supervisor), Hobley, T. J. (Supervisor) & Yesiltas, B. (Supervisor)

  15/05/2022 → 14/05/2025

  Project: Research

  • Brewer's Spent Grain Protein 100%
  • Functional Peptides 100%
  • Brewer's Spent Grain 100%
  • Green Technology 100%
  • Antioxidant Peptides 100%

• Exploration of single-cell protein signaling networks in leukemia stem cells

  Fernández, P. A. (PhD Student), Schoof, E. (Main Supervisor) & Hefzi, H. (Supervisor)

  15/05/2022 → 14/05/2025

  Project: PhD

• Evolution-guided discovery and engineering of Highly Reducing Polyketide Synthases

  Jayachandran, S. (PhD Student), Cruz-Morales, P. (Main Supervisor), Keasling, J. (Supervisor), Cox, R. J. (Examiner) & Vagstad, A. (Examiner)

  15/05/2022 → 14/05/2025

  Project: PhD

• Microbiology of hydrogen sulfide production in recirculating aquaculture systems

  Nguyen-tiêt, A. (PhD Student), Aalto, S.-L. H. (Main Supervisor) & Bertilsson, S. (Supervisor)

  15/05/2022 → 14/07/2025

  Project: PhD

• Digitalization of Downstream Process Design and Development

  Frandsen, J. (PhD Student), Abildskov, J. (Main Supervisor), Gernaey, K. V. (Supervisor), Huusom, J. K. (Supervisor), Sainio, T. (Examiner) & Sellberg, A. (Examiner)

  01/05/2022 → 30/04/2025

  Project: PhD

• Micro-scale devices for sampling within the intestinal environment of mammals

  de Visser, E. N. (PhD Student), Mortensen, M. S. (Main Supervisor) & Ghavami, M. (Supervisor)

  01/05/2022 → 22/12/2026

  Project: PhD

• Sustainable Chemical Production using Drop-in Biocatalysis

  Girard, M. (PhD Student), Woodley, J. (Main Supervisor), Enevoldsen, A. D. (Supervisor) & Worberg, A. (Supervisor)

  01/05/2022 → 30/04/2026

  Project: PhD

• Single Cell Immune-based Analysis of the Efficacy of Pre-Surgery Treatments for Colorectal Cancer

  Del Buono D'Ondes, T. (PhD Student), Brix, S. (Main Supervisor) & Gögenur, I. (Supervisor)

  01/05/2022 → 29/12/2025

  Project: PhD

• Engineering and phenotypic profiling of beneficial aquaculture microbiomes

  Smahajcsik, D. (PhD Student), Gram, L. (Main Supervisor), Zhang, S. (Supervisor), Sipkema, D. (Examiner) & Burmølle, M. (Examiner)

  01/05/2022 → 30/04/2025

  Project: PhD

• High energy biofuel production with fungal Polyketide synthases

  Chen, L. (PhD Student), Cruz-Morales, P. (Main Supervisor) & Frandsen, R. J. N. (Supervisor)

  01/05/2022 → 16/11/2025

  Project: PhD

• Discovery and Production of New Carbohydrate Active Enzymes

  Gómez, M. M. (PhD Student), Mortensen, U. H. (Main Supervisor) & Henrissat, B. P. (Supervisor)

  01/05/2022 → 30/04/2025

  Project: PhD

• Synthetic Biology of Natural Products

  Gadar Lopez, A. E. (PhD Student), Cruz-Morales, P. (Main Supervisor), Keasling, J. (Supervisor), Mortensen, U. H. (Supervisor), Alberti, F. (Examiner) & Genilloud, O. (Examiner)

  01/05/2022 → 30/04/2025

  Project: PhD

• PARC: Partnership for the Assessment of Risks from Chemicals

  Svingen, T. (PI), Wedebye, E. B. (PI), Pires, S. M. (PI), Vinggaard, A. M. (PI), Beltoft, V. M. (Project Manager), Ramhøj, L. (Project Participant), Houmark Stub, M. (PhD Student), Nikolov, N. G. (Project Participant), Nissen, A. C. V. E. (Project Participant) & Axelstad Petersen, M. Z. (Project Participant)

  01/05/2022 → 30/04/2029

  Project: Research

• eAI: Embedded AI

  Fafoutis, X. (Project Coordinator) & Madsen, J. (PI)

  01/04/2022 → 31/12/2025

  Project: Research

  • Embedded AI 100%
  • Artificial Intelligence 100%
  • Edge Devices 66%
  • Security Privacy 66%
  • Data Discovery 33%

• Growth and metabolic scaling of fish: unravelling how variation in growth affects metabolic scaling

  Rosén, A. (PhD Student), Norin, T. (Main Supervisor) & Andersen, K. H. (Supervisor)

  01/04/2022 → 29/08/2025

  Project: PhD

• Assessment and development of microbiological test methods used for concept proofing of With-out Preservatives (WOP)-based devices at Novo Nordisk

  Nateqi, M. S. (PhD Student), Jelsbak, L. (Main Supervisor), Bengtsson, H. (Supervisor), Glenting, V. P. (Supervisor) & Hansen, R. E. (Supervisor)

  15/03/2022 → 28/05/2025

  Project: PhD

• Advanced microbiome therapeutics for personalized medicine in non-alcoholic fatty liver disease (NAFLD)

  Koulouktsis, A. (PhD Student), Sommer, M. O. A. (Main Supervisor) & Vazquez Uribe, R. (Supervisor)

  15/03/2022 → 14/06/2025

  Project: PhD

• Preparation of artificial skin membrane with sweating capabilities for realistic measurements of ex-vivo transdermal drug delivery (PASET)

  Eriksen, S. H. (PhD Student), Skov, A. L. (Main Supervisor), Yu, L. (Supervisor) & Liu, D. (Supervisor)

  15/03/2022 → 11/11/2025

  Project: PhD

• Developing Biocatalytic Indigo

  de Boer, R. M. (PhD Student), Sukumara, S. (Main Supervisor) & Welner, D. H. (Supervisor)

  01/03/2022 → 28/11/2025

  Project: PhD

• High-throughput technologies for natural products biosynthesis in cell factories

  Hansson, F. G. (PhD Student), Jensen, E. D. (Supervisor), Mijakovic, I. (Main Supervisor), Carlquist, P. M. (Examiner) & Kampranis, S. C. (Examiner)

  01/03/2022 → 30/05/2025

  Project: PhD

• Characterization of microbiomesin infected human lungs

  Madsen, K. (PhD Student), Molin, S. (Main Supervisor), Johansen, H. K. (Supervisor), Jelsbak, L. (Examiner) & Unterweger, D. (Examiner)

  01/02/2022 → 23/05/2025

  Project: PhD

• Revealing and controlling previously unexplored H2S bacteria (REACT2S) (39967/109258)

  Aalto, S.-L. H. (PI), Nguyen-tiêt, A. (PhD Student), Pedersen, L.-F. (Project Participant), Bertilsson, S. (Collaborative Partner), Nielsen, J. L. (Collaborative Partner), Letelier-Gordo, C. O. (Collaborative Partner), Østergaard, S. (Project Participant) & Sproegel, U. (Project Participant)

  01/01/2022 → 31/12/2025

  Project: Research

  • Aquaculture Environment 100%
  • H2S Production 100%
  • Aquaculture Production 100%
  • Denmark 100%
  • Sulfide 100%

• Effect of environmental abiotic factors on the physiology and metabolism of gut microbes

  Brinck, J. E. (PhD Student), Licht, T. R. (Main Supervisor), Laursen, M. F. (Supervisor) & Sinha, A. K. (Supervisor)

  01/01/2022 → 26/07/2025

  Project: PhD

• GeoCamp: Occurrence and risk factors for campylobacter-positive broiler flocks in areas with many cattle herds during the summer

  Lassen, B. (PI), Foddai, A. (Project Participant) & Sandberg, M. (Project Applicant)

  01/01/2022 → 30/06/2025

  Project: Research

  • Occurrence Factor 100%
  • Risk Factors 100%
  • Campylobacter 100%
  • Broiler Flocks 100%
  • Cattle Herds 100%

• Target-driven systematic Life Cycle Engineering for absolute environmental sustainability

  Serrano, T. (PhD Student), Hauschild, M. Z. (Main Supervisor), McAloone, T. C. (Supervisor), Kara, S. (Supervisor) & Bjørn, A. (Supervisor)

  01/12/2021 → 10/06/2026

  Project: PhD

  • Life Cycle Engineering 100%
  • Absolute Environmental Sustainability 100%
  • Lifecycle 100%
  • Life Cycle Assessment 100%
  • Sustainable Society 50%

• Scale-up of 3-hydroxypropanoic acid production in strains of Corynebacterium glutamicum equipped with genetically encoded sensors (ScaleSense)

  Diez Callau, A. (PhD Student), Woodley, J. (Main Supervisor), Junicke, H. (Supervisor) & Seibold, G. (Supervisor)

  01/12/2021 → 29/04/2025

  Project: PhD

• AI modeling and evaluation in precision psychiatry

  Nielsen, S. D. (PhD Student), Clemmensen, L. K. H. (Main Supervisor) & Eriksen Benros, M. (Supervisor)

  01/12/2021 → 06/07/2025

  Project: PhD