Department of Biotechnology and Biomedicine

Publications

Publications per year 1987 2017 2018 2019 2020 2021 2022 2023 2024 2025

• 1741 Journal article
• 154 Ph.D. thesis
• 106 Conference abstract in journal
• 91 Conference abstract for conference
• 314 More
  • 79 Review
  • 55 Book chapter
  • 50 Conference abstract in proceedings
  • 29 Patent
  • 19 Article in proceedings
  • 19 Poster
  • 14 Editorial
  • 13 Letter
  • 8 Comment/debate
  • 8 Contribution to newspaper - Comment/debate
  • 6 Report
  • 6 Conference article
  • 4 Book
  • 1 Anthology
  • 1 Paper
  • 1 Net publication - Internet publication
  • 1 Working paper

Publications per year

Publications per year

Search results

• 2024

  Activity Characterization of New Carbohydrate Processing Enzymes (PhD2)

  Moreno Prieto, E. S., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 129 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Glycoside Hydrolases 100%
  • Enzyme 100%
  • Glycoside Hydrolase 100%
  • PHD2 100%
  • Enzymatic Hydrolysis 14%
  6 Downloads (Pure)

• Bioprocess intensification for xylitol production from renewable resources

  Ordeñana Manso, J., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 115 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Bioprocesses 100%
  • Renewable Energy Resource 100%
  • Xylitol Production 100%
  • Lignin 100%
  • Hydrogenation 100%
  106 Downloads (Pure)

• Design and application of microbial consortia for enhanced biomanufacturing

  Rama, E., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 187 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Saccharification 100%
  • Microbial Consortium 100%
  • Microbial 100%
  • Phenolic Compound 100%
  • Cereal 100%
  128 Downloads (Pure)

• Establishing Debaryomyces hansenii as a superior cell factory for the green transition: optimizing the use of industrial side-streams and complex feedstock for biotech applications

  Duran, M. E., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 227 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Volatile Fatty Acid 100%
  • Debaryomyces Hansenii 100%
  • Biotech Applications 100%
  • Promoter Region 22%
  • Saccharomyces cerevisiae 22%
  41 Downloads (Pure)

• Genetic Insights into Growth, Sporulation, and Performance of Bacillus subtilis during Industrial Fermentation Conditions

  Hellensberg, C. J. H., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 113 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Bacillus Subtilis 100%
  • Sporogenesis 100%
  • Gene Deletion 22%
  • Gene Expression Assay 22%
  • Ribosome 11%
  22 Downloads (Pure)

• Genome mining and metabolic engineering for bioactive natural product production in Streptomyces

  Yang, Z., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 260 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Metabolic Engineering 100%
  • Streptomyces 100%
  • Genome Mining 100%
  • Spirolactone 80%
  • Anabolism 54%
  207 Downloads (Pure)

• Microbial conversion of CO₂ into value-added products

  Caivano, A., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 207 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Value-added Products 100%
  • Microbial Conversion 100%
  • CO2 Conversion 100%
  • Acetic Acid 100%
  • Mixotroph 100%
  107 Downloads (Pure)

• Omics-guided bioactive natural products discovery from Streptomyces

  Mahmoud Mohamed, M. M., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 243 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Tamsulosin 100%
  • Natural Product 100%
  • Streptomyces 100%
  • Antifungal Activity 18%
  • Antibiotic Agent 18%
  69 Downloads (Pure)

• PureMilk: Developing a Test for Identification of Pathogenic Bacteria in Human Breast Milk

  Holritz, L., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 327 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Milk Bank 100%
  • Donor Human Milk 66%
  • Toxin Secretion 66%
  • Holder Pasteurization 66%
  • Human Milk Analysis 66%
  75 Downloads (Pure)

• Robot-assisted phenotypic screenings and utilization of biosensors to support physiological studies and cell-factory design

  Weiß, T., 2024, Kgs. Lyngby, Denmark: DTU Bioengineering. 177 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Replica Plating 100%
  • Automated High-throughput Screening 33%
  • Picking Robot 33%
  • Transposon Insertion Library 33%
  • Gel Documentation 33%
  28 Downloads (Pure)
• 2023

  Applying omics and synthetic biology tools for improving the production of sustainable industrial biochemicals

  Chandrasekaran, P., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 138 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Escherichia coli 100%
  • Plasmid 66%
  • Genetic Manipulation 50%
  • Metabolic Pathway 33%
  • DNA Modification 33%
  120 Downloads (Pure)

• Design of consensus toxins and their use for the discovery of broadly neutralizing antibodies

  Jensen, A. D., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 191 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Antivenom 100%
  • Neutralizing Antibody 100%
  • Snake Venom 75%
  • Nanobody 50%
  • Single-Domain Antibody 50%
  118 Downloads (Pure)

• Development and Integration of Sustainable Processes for Biomass Fractionation

  Balaguer Moya, E., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 193 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Pretreatment 100%
  • Fractionation 100%
  • Biomass Conversion 66%
  • Conversion Process 40%
  • Hemicellulose 40%
  22 Downloads (Pure)

• Development and Optimization of tools for High-quality Spatial Single-cell Gene Expression Profiling using High-resolution Spatial Transcriptomics Technology

  Li, M., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 140 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Image Stitching 100%
  • Spatial Resolution 100%
  • Spatial Quality 100%
  • Gene Expression Profiling 100%
  • Transcriptomics 100%
  119 Downloads (Pure)

• Discovery of antibodies with pH-dependent binding towards snake venom toxin

  Ej Efternavn, T., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 135 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Fragment Antigen Binding 100%
  • Fragment Antigen-Binding 70%
  • Human Antibody Library 33%
  • PH-dependent Interaction 33%
  • Toxicokinetics 23%
  220 Downloads (Pure)

• Engineering and structural characterization of cross-reactive, pH-sensitive antibodies against the long-chain α-neurotoxins

  Wade, J., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 146 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Monospecific Antibody 100%
  • PH-dependent Antibody 30%
  • Neutralization 23%
  • Antibody Heavy Chain 20%
  • Light Chain 16%
  223 Downloads (Pure)

• Engineering Strategies for Design and Production of Bispecific Antibodies

  Madsen, A. V., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 166 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Bispecific Antibody 100%
  • Monospecific Antibody 45%
  • Binding Antibody 45%
  • Immune Complex 18%
  • Cross Linking 9%
  17 Downloads (Pure)

• Enzymatic Conversion of Red Blood Cell Antigens to the Universal Blood Group O

  Jensen, M., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 169 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Red Blood Cell Antigens 100%
  • B Antigen 100%
  • Blood Group O 100%
  • Universal Blood 100%
  • Surface Glycoconjugates 28%
  355 Downloads (Pure)

• Enzymatic Fucoidan Extraction and Processing

  Thi, T. N., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 104 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Fucoidan 100%
  • Enzymatic Hydrolysis 100%
  • Alginic Acid 60%
  • Alginate Lyase 39%
  • Lyase 36%
  378 Downloads (Pure)

• Evolutionary landscape of bacterial adaptation to diverse environmental niches

  Hu, G., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 283 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Bacillus subtilis 100%
  • Biofilm 83%
  • Bacillus 33%
  • Bacilli 33%
  • Plant Growth 33%
  97 Downloads (Pure)

• Exploring protein sequence space for mechanistic studies and functional improvements

  Zhai, L., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 184 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Mechanistic Study 100%
  • Deoxyribonucleic Acid 100%
  • Primary Structure 100%
  • Messenger RNA 81%
  • Kd 27%
  11 Downloads (Pure)

• Exploring the Ecological Implications of Tropodithietic Acid Production in Phaeobacter piscinae

  Lindqvist, L. L., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 171 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Secondary Metabolite 100%
  • Phaeobacter 100%
  • Gene Transfer Agent 100%
  • Horizontal Gene Transfer 44%
  • Microorganism 22%
  123 Downloads (Pure)

• Functional Characterization of Dermokine in Epidermal Differentiation

  Canbay, V., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 195 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Catenin 100%
  • Epidermal Differentiation 100%
  • Stromelysin 2 66%
  • Ribonucleoprotein 33%
  • Somatomedin B Receptor 33%
  57 Downloads (Pure)

• Host Factor Determinants of Influenza A Virus Infection and Severity in Pigs

  Glud, H. A., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 238 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Influenzavirus A 100%
  • Viral Disease 100%
  • Host Factor 100%
  • Dynamics 21%
  • Zoonotic 13%
  185 Downloads (Pure)

• Improving antifungal properties of Bacillus spp.

  Stancheva, B. K., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 332 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Bacillus 100%
  • Bacilli 100%
  • Antifungal Activity 100%
  • Biofilm 80%
  • Coculture 80%
  94 Downloads (Pure)

• Insights into the effect of substrate crystallinity on the enzymatic degradation of Poly(ethylene terephthalate)

  Thomsen, T. B., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 164 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Enzymatic Degradation 100%
  • Ethylene Terephthalate 100%
  • Crystallinity 100%
  • Polyethylene Terephthalate 100%
  • Lag Phase 33%
  178 Downloads (Pure)

• Integrated Optimization of Hemoprotein Biomanufacturing in Yeast: From Upstream Engineering of Heme Synthesis to Downstream Purification of Human Hemoglobin

  Frost, A. T., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 310 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Hemoprotein 100%
  • Embryonic Hemoglobin 57%
  • Fetal Hemoglobin 28%
  • CYP2C9 14%
  • Altruistic Donor 11%
  89 Downloads (Pure)

• Interspecies between Bacillus subtilis and Pseudomonas

  Lyng, M., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 151 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Bacillus Subtilis 100%
  • Pseudomonas 100%
  • Pseudomonad 100%
  • Bacillus subtilis 60%
  • Siderophore 37%
  206 Downloads (Pure)

• Long-read genome sequencing reveals the evolution, diversity, and adaptation of algae

  Jian, J., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 271 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Genome Sequencing 100%
  • Diatom 100%
  • Pathogenicity 66%
  • Horizontal Gene Transfer 66%
  • Prototheca 50%
  151 Downloads (Pure)

• Management of pathogenic bacteria with Bacillus probiotics

  Lauridsen, C. A. S., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 156 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Probiotic 100%
  • Bacillus subtilis 100%
  • Bacilli 100%
  • Bacillus Probiotics 100%
  • Microorganism 80%
  74 Downloads (Pure)

• Maximizing Diversity and Functionality in Human Single-Domain Antibody Phage Display Libraries

  Mejias Gomez, O., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 202 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Biopanning 100%
  • Rituxan 50%
  • Human Variables 50%
  • Helper Phage 50%
  • Humira 50%
  177 Downloads (Pure)

• Mechanistic Studies of Amyloid Propagation Auto-catalytic functions of aggregation

  Larsen, J. A., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 124 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Mechanistic Study 100%
  • Structure 100%
  • Catalysis 100%
  • Amyloid 100%
  • Solidification 100%
  53 Downloads (Pure)

• Microalgal Microbiomes: Composition, Assembly, and Interactions

  Roager, L., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 193 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Microbiome 100%
  • Microbiome Assembly 100%
  • Microalga 35%
  • Phycosphere 21%
  • Host Range 15%
  68 Downloads (Pure)

• Mitigating the impact of PRV-3 infection in rainbow trout production by high-throughput diagnostic platforms

  Sørensen, J., 2023, DTU Aqua. 150 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Oncorhynchus mykiss 100%
  • Infection 100%
  • Epidemic 100%
  • Infectious Agent 100%
  • Disease 75%
  60 Downloads (Pure)

• Model guided design of microbial consortia for mixed-culture fermentations

  Bras, J. E., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 118 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Mixed Cell Culture 100%
  • Microbial Consortium 100%
  • Coculture 75%
  • Lactococcus 50%
  • Lactococcus Lactis Subsp. Cremoris 50%

• Modulating poultry microbiota to promote gut function by enzymatic tailoring of feed

  Staack, L., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 134 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Feeds 100%
  • Polysaccharide 66%
  • Soybean Meal 41%
  • Pectin 41%
  • Rapeseed Meal 33%
  55 Downloads (Pure)

• Phage-based approaches targeting MDR/XDR High-Risk clones of Pseudomonas aeruginosa

  Antonova Tavares Chichkova, M., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 174 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Anti-Pseudomonas 100%
  • DNA Therapeutics 100%
  • Phagemid 100%
  • Tail Fiber Engineering 100%
  • Chimeric Fiber 100%
  89 Downloads (Pure)

• Precision Targeting of Tumor antigens by glycan Integrated Design Antibody Libraries

  Gatos, S., 11 Jul 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 113 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Antibody Library 100%
  • Precision Targeting 100%
  • CD43 60%
  • Hybridoma 25%
  • Glycopeptide Epitope 20%
  427 Downloads (Pure)

• Preventing Emergence of Antibiotic Resistant High-Risk Clones of Pseudomonas aeruginosa

  Anbo, M., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 179 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Pseudomonas Aeruginosa (P. aeruginosa) 100%
  • Antibiotic Resistant 100%
  • High-risk Clone 100%
  • Pseudomonas aeruginosa 100%
  • Serotype 100%
  150 Downloads (Pure)

• Preventing the emergence and spread of MDR/XDR High-Risk Pseudomonas aeruginosa clones

  Zhao, Y., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 156 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Pseudomonas aeruginosa 100%
  • Phylogeny 25%
  • Serotype 25%
  • Prevalence 18%
  • MexAB-OprM 16%
  74 Downloads (Pure)

• Quantitative ecology of Bacilli and associated soil microorganisms

  Xu, X., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 198 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Soil Microorganism 100%
  • Bacilli 100%
  • Soil Microflora 100%
  • Quantitative Ecology 100%
  • Biotic Factor 66%
  69 Downloads (Pure)

• Reaction pathways for the enzymatic degradation of poly(ethylene terephthalate), PET

  Schubert, S. W., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 142 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File
  19 Downloads (Pure)

• Robotics in biotech: Development of an ultra high throughput platform for cell factory selection and recombinant protein screening

  Unger, A., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 127 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Biotechnology 100%
  • Recombinant Protein 100%
  • Cell Factory 100%
  • Robotics 100%
  • Very High Throughput 100%
  143 Downloads (Pure)

• Scalable methods to study protein solubility: Applications for biomolecular condensates

  Norrild, R. K., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 135 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Phase Separation 100%
  • Biomolecular Condensates 100%
  • Amino Acids 100%
  • DEAD Box Protein 50%
  • Protein Assembly 50%
  216 Downloads (Pure)

• Structure-Function Relationships of Enzymes Involved in Starch Modification

  Wang, Y., 2023, Kongens Lyngby: Technical University of Denmark. 247 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Starch 100%
  • Enzyme 100%
  • Structure Activity Relation 100%
  • Binding Domain 17%
  • Pullulanase 14%
  26 Downloads (Pure)

• The Role of Secondary Metabolites in the Fungal Community of Black Apples

  Clemmensen, S. E., 2023, Kgs. Lyngby, Denmark: DTU Bioengineering. 194 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Secondary Metabolite 100%
  • Coculture 13%
  • Filamentous Fungus 13%
  • Metabolite 13%
  • Ascladiol 10%
  234 Downloads (Pure)
• 2022

  Assessment of the biosynthesis potential of microbial dark matter by cultivation independent techniques

  Geers, A. U., 2022, Kgs. Lyngby, Denmark: DTU Bioengineering. 157 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Microbiome 100%
  • Microbial Dark Matter 100%
  • Secondary Metabolite 75%
  • Microorganism 75%
  • Amplicon Sequencing 50%
  301 Downloads (Pure)

• Bio-succinic acid production from alternative feedstock

  Leonov, P. S., 2022, Kgs. Lyngby, Denmark: DTU Bioengineering. 166 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Process Design 100%
  • Growth Kinetics 100%
  • Crude Glycerol 100%
  • Product Recovery 100%
  • Chemostat 100%
  162 Downloads (Pure)

• Characterisation and optimisation of Escherichia coli cell factories for large-scale industrial production of human milk oligosaccharides

  Gecse, G., 2022, Kgs. Lyngby, Denmark: DTU Bioengineering. 236 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Fermentation 100%
  • Industrial Production 100%
  • Escherichia Coli Cells 100%
  • Downscaling 100%
  • Cell Factory 100%
  567 Downloads (Pure)

• Comparative and evolutionary analyses of algal genomes reveal their adaptive evolution

  Li, L., 2022, Kgs. Lyngby, Denmark: DTU Bioengineering. 160 p.

  Research output: Book/Report › Ph.D. thesis

  Open Access

  File

  • Evolutionary Adaptation 100%
  • Diatom 100%
  • Green Alga 80%
  • Methylation 40%
  • Abiotic Stress 40%
  193 Downloads (Pure)