Department of Biotechnology and Biomedicine

Projects

Projects per year 1997 2017 2018 2019 2020 2021 2022 2023 2024 2029

• 1 Not started
• 127 Active
• 213 Finished

Projects per year

Search results

• Active

  Enzyme discovery and engineering for selective fatty acid oxyfunctionalization

  Castellvi Domingo, C. (PhD Student), Acevedo-Rocha, C. G. (Main Supervisor), Meyer, A. S. (Supervisor), Payen, C. (Supervisor) & Pennec, A. (Supervisor)

  01/05/2025 → 30/04/2028

  Project: PhD

• De novo design of poly-specific peptides

  Møller, V. E. (PhD Student), Jenkins, T. P. (Main Supervisor), Rivera de Torre, E. (Supervisor), Nielsen, J. C. (Supervisor) & Nygaard, M. M. (Supervisor)

  01/05/2025 → 30/04/2028

  Project: PhD

• Engineering alkenal reductase reversibility for new applications

  Rindal, T. (PhD Student), Zeuner, B. (Main Supervisor), Larsen, T. O. (Supervisor), Newton, S. (Supervisor) & Payen, C. (Supervisor)

  01/05/2025 → 30/04/2028

  Project: PhD

• Integrating Omics Technologies and Microbial Co-Culture for Enhanced Biomass Conversion

  Ramos Reyes, M. F. (PhD Student), Mussatto, S. I. (Main Supervisor), Gram, L. (Supervisor) & Gradilla-Hernández, M. S. (Supervisor)

  15/04/2025 → 14/04/2028

  Project: PhD

• The Human Allergen Atlas: High-Throughput Epitopic Characterization of Allergens

  Møiniche, M. V. B. (PhD Student), Laustsen-Kiel, A. H. (Main Supervisor) & Rivera de Torre, E. (Supervisor)

  01/04/2025 → 31/03/2028

  Project: PhD

• Enhanced nanobody functionality and stability through rational and in silico protein engineering

  Jansen, T. P. A. (PhD Student), Laustsen-Kiel, A. H. (Main Supervisor), Jenkins, T. P. (Supervisor) & Ljungars, A. (Supervisor)

  01/04/2025 → 31/03/2028

  Project: PhD

• Shielding the Vulnerable:Nanobody-Based Influenza Defense for High-Risk Populations

  Pina Agullet, J. (PhD Student), Skovgaard, K. (Main Supervisor), Goletz, S. (Supervisor) & Trebbien, R. (Supervisor)

  01/04/2025 → 31/03/2028

  Project: PhD

• Wired enzyme immobilization of formaldehyde dehydrogenase for bioelectrocatalytic CO2 conversion

  O'Regan, T. (PhD Student), Meyer, A. S. (Main Supervisor), Pfaff, L. (Supervisor), Westh, P. (Supervisor) & Call, D. (Supervisor)

  15/02/2025 → 14/02/2028

  Project: PhD

• Marine Microbial Cell Factory for Novel Antibiotics Discovery

  Kozlowski, H. C. J. (PhD Student), Gram, L. (Main Supervisor) & Zhang, S. (Supervisor)

  01/02/2025 → 31/01/2028

  Project: PhD

• Alcohol dehydrogenase engineering for cell free biocatalytic CO2 conversion to methanol

  Jensen, C. N. (PhD Student), Meyer, A. S. (Main Supervisor), Agger, J. W. (Supervisor), Pfaff, L. (Supervisor) & Schenk, G. (Supervisor)

  15/01/2025 → 14/01/2028

  Project: PhD

• Improving single-cell proteomics through advanced sample preparation

  Hartlmayr, D. N. (PhD Student), Schoof, E. (Main Supervisor) & Hefzi, H. (Supervisor)

  15/01/2025 → 14/01/2028

  Project: PhD

• AI design of analytical tool compounds

  Jacobsen, C. P. (PhD Student), Jenkins, T. P. (Main Supervisor), Gunnarsson, S. B. (Supervisor), Hald, A. (Supervisor) & Rasch, M. G. (Supervisor)

  15/01/2025 → 14/01/2028

  Project: PhD

• Sub-gene level analysis of proteomics data

  Zhen, Z. T. (PhD Student), Vitting-Seerup, K. (Main Supervisor) & Schoof, E. (Supervisor)

  01/12/2024 → 30/11/2027

  Project: PhD

• Omics-driven discovery of antifungal metabolites

  Haahr, M. (PhD Student), Ding, L. (Main Supervisor), Weber, T. (Supervisor) & Li, M. (Supervisor)

  01/12/2024 → 30/11/2027

  Project: PhD

• Exploration of the sequence dependence of protein assembly and condensation at high throughput

  Zanchet, B. (PhD Student), Buell, A. K. (Main Supervisor) & Jenkins, T. P. (Supervisor)

  01/12/2024 → 30/11/2027

  Project: PhD

• Combotope-specific single chain fragments (scFv) antibodies by Phage Display Technologies

  Meier, E. (PhD Student), Laustsen-Kiel, A. H. (Main Supervisor), Blixt, K. O. (Supervisor) & Germeraad, W. (Supervisor)

  15/11/2024 → 14/11/2027

  Project: PhD

• Omics analysis of the functional interplay between cell signalling and metabolism in breast cancer cells

  Price, J. (PhD Student), Francavilla, C. (Main Supervisor) & Schoof, E. (Supervisor)

  15/11/2024 → 14/11/2027

  Project: PhD

• Bioinformatics of the Glycosylation Machinery of Archaea

  Lagan, N. D. (PhD Student), Henrissat, B. P. (Main Supervisor), Gippert, G. P. (Supervisor) & Meyer, A. S. (Supervisor)

  15/11/2024 → 14/11/2027

  Project: PhD

• Mining bioactive phosphorus-containing molecules from Streptomyces

  Kostoglou, A. (PhD Student), Ding, L. (Main Supervisor) & Cho, B.-K. (Supervisor)

  01/11/2024 → 31/10/2027

  Project: PhD

• Dissecting dietary glycan recognition across the microbiome

  Zarechyntsava, M. (PhD Student), Henrissat, B. P. (Main Supervisor), Gippert, G. P. (Supervisor), Meyer, A. S. (Supervisor), Vuillemin, M. (Supervisor) & Brumer, H. (Supervisor)

  01/11/2024 → 31/10/2027

  Project: PhD

• Develop Cutting-Edge Handheld Sensor for Life-Saving Acute Circulatory Failure Diagnosis

  Cristea, D.-S. (PhD Student), Svendsen, W. E. (Main Supervisor) & Kalyani, N. (Supervisor)

  01/11/2024 → 31/10/2027

  Project: PhD

• Empowering de novo protein sequencing through deep learning-based assembly

  Reverenna, M. (PhD Student), Santos Delgado, A. (Main Supervisor) & Jenkins, T. P. (Supervisor)

  01/10/2024 → 30/09/2027

  Project: PhD

• Modeling Sustainability Performance of Bio-based Solutions

  Alenfalk, K. A. T. (PhD Student), Clemmensen, L. K. H. (Main Supervisor), Mansourvar, M. (Supervisor) & Sukumara, S. (Supervisor)

  01/10/2024 → 30/09/2027

  Project: PhD

• Scalable manufacturing of iPSC derived Natural killer cells

  Wali, G. A. (PhD Student), Pedersen, L. E. (Main Supervisor) & Goletz, S. (Supervisor)

  01/10/2024 → 30/09/2027

  Project: PhD

• Multi-Scale Models for Sustainable Bioproduction

  Cohen, S. (PhD Student), Sukumara, S. (Main Supervisor), Mansourvar, M. (Supervisor) & Yang, L. (Supervisor)

  15/09/2024 → 14/09/2027

  Project: PhD

• Fish skin waste valorization to novel healthy food ingredients and precision prebiotics

  Kolitsida, P. (PhD Student), Chronakis, I. (Main Supervisor), Hachem, M. A. (Supervisor) & Jessen, F. (Supervisor)

  01/09/2024 → 31/08/2027

  Project: PhD

• Raman spectroscopy and Multi-Modal Machine Learning Models

  Jensen, E. A. (PhD Student), Clemmensen, L. K. H. (Main Supervisor), Kristensen, A. (Supervisor) & Pedersen, L. E. (Supervisor)

  01/09/2024 → 31/08/2027

  Project: PhD

  • Machine Learning Models 100%
  • Raman Spectroscopy 100%
  • Multimodal Machine Learning 100%
  • Natural Killer Cells 100%
  • Natural Killer Cell 100%

• Integrated model for up- and downstream bioprocess intensification

  Pfaff, D. (PhD Student), Woodley, J. (Main Supervisor), Kager, J. (Supervisor), Ruiz, J. L. M. (Supervisor) & Yang, L. (Supervisor)

  01/09/2024 → 31/08/2027

  Project: PhD

• Exploring the relationship between amino acid sequence and assembly behaviour of the C-terminal LCD of TDP-43

  Saraceno, F. (PhD Student), Buell, A. K. (Main Supervisor) & Morth, J. P. (Supervisor)

  01/09/2024 → 31/08/2027

  Project: PhD

• Development of Logistics Service Architecture

  Hermann, A. S. (PhD Student), Hvam, L. (Main Supervisor), Mortensen, N. H. (Supervisor) & Jørgensen, L. (Supervisor)

  01/09/2024 → 31/08/2027

  Project: PhD

• Regioselectivity in enzymatic carbohydrate synthesis

  Makrygianni, V. (PhD Student), Zeuner, B. (Main Supervisor) & Clausen, M. H. (Supervisor)

  01/09/2024 → 31/08/2027

  Project: PhD

• Structural Enzmology of polyurethanases

  Østergaard, R. R. (PhD Student), Morth, J. P. (Main Supervisor) & Westh, P. (Supervisor)

  15/08/2024 → 14/08/2027

  Project: PhD

• Strain robustness and physiology characterization in scale-down reactors

  Semenov Petrov, M. (PhD Student), Förster, J. (Main Supervisor), Kager, J. (Supervisor), Ruiz, J. L. M. (Supervisor) & Yang, L. (Supervisor)

  01/08/2024 → 31/07/2027

  Project: PhD

• Assessing the physiological, regulatory and gene expressionchanges affecting global microbial metabolism uponfermentation process upscaling: a multi-omics study

  Plaza, L. G. (PhD Student), Ruiz, J. L. M. (Main Supervisor), Frandsen, R. J. N. (Supervisor) & Yang, L. (Supervisor)

  01/08/2024 → 31/07/2027

  Project: PhD

• Advancing Debaryomyces hansenii for production of lipid precursors from algal biomass in open (non-sterile) fermentations

  Recchia, S. (PhD Student), Ruiz, J. L. M. (Main Supervisor), Iosca, G. (Supervisor) & Garcia, A. D. M. (Supervisor)

  01/08/2024 → 31/07/2027

  Project: PhD

• Molecular mechanisms for regulation of AMPK and energetic stress signalling by LUBAC and OTULIN

  Gradinaru, S. K. (PhD Student), Damgaard, R. B. (Main Supervisor) & Francavilla, C. (Supervisor)

  01/08/2024 → 31/07/2027

  Project: PhD

• High-thorughput Adaptive Laboratory Evolution for identification and further optimization of alternative yeasts for lipid precursors accumulation using salineresidues containing SCFAs and methanol

  Mastrodima, M. (PhD Student), Ruiz, J. L. M. (Main Supervisor), Iosca, G. (Supervisor) & Tomás-Pejó, E. (Supervisor)

  01/08/2024 → 31/07/2027

  Project: PhD

• Recombinant production and biophysical and structural characterization of plant proteins

  Bicanin, M. (PhD Student), Buell, A. K. (Main Supervisor) & Lund, M. N. (Supervisor)

  01/08/2024 → 31/07/2027

  Project: PhD

• Advancing Precision Fermentation: A Graph-Based Toolkit for Optimizing Fungal Microorganisms in Valuable Compound Production

  Ko, J.-T. (PhD Student), Hoof, J. B. (Supervisor), Meyer, A. S. (Supervisor) & Santos Delgado, A. (Main Supervisor)

  15/07/2024 → 14/07/2027

  Project: PhD

• Analyzing microbiomes using long-read metagenomics and transcriptomics - DTU Bioengineering

  Hurtado Lopez, N. (PhD Student), Strube, M. L. (Main Supervisor), Gram, L. (Supervisor) & Schostag, M. D. (Supervisor)

  01/07/2024 → 30/06/2027

  Project: PhD

• Elucidating the Role of Multifunctional NDPK Oligomerization in Transcription Factor Regulation and Stem Cell Pluripotency

  Lim, Y. Y. (PhD Student), Natarajan, K. (Main Supervisor) & Morth, J. P. (Supervisor)

  01/06/2024 → 31/05/2027

  Project: PhD

• Bayesian optimisation frameworks for the rapid evolution of enzymes

  Brasas, V. (PhD Student), Clemmensen, L. K. H. (Supervisor), Welner, D. H. (Supervisor) & Jenkins, T. P. (Main Supervisor)

  01/06/2024 → 31/05/2027

  Project: PhD

• The role of biotransformations in marine and soil microbiomes

  Pham, Q. K. (PhD Student), Larsen, T. O. (Main Supervisor) & Jarmusch, S. A. (Supervisor)

  01/06/2024 → 31/05/2027

  Project: PhD

• Computational prediction of causal cell type regulators from single-cell and spatial transcriptomics

  Bustos Gutiérrez, Á. (PhD Student), Hadrup, S. R. (Supervisor) & Brix, S. (Main Supervisor)

  01/06/2024 → 31/05/2027

  Project: PhD

• Pump-induced aggregation of proteins

  Rebollo Gonzalez, R. (PhD Student), Buell, A. K. (Main Supervisor), Gernaey, K. V. (Supervisor), Anna Erica Cragnell, C. (Supervisor) & Jozef Dorosz, J. (Supervisor)

  01/06/2024 → 31/05/2027

  Project: PhD

• Future aseptic production ¿ rethink the product

  Rønnestad, B. E. M. (PhD Student), Morth, J. P. (Main Supervisor), Zhang, X. (Supervisor), Schebye, B. (Supervisor) & Tawfieq, M. (Supervisor)

  01/05/2024 → 30/04/2027

  Project: PhD

• In Situ Detection of Secondary Metabolites

  Otto, D. J. (PhD Student), Ding, L. (Main Supervisor) & Andersen, A. J. C. (Supervisor)

  01/05/2024 → 30/04/2027

  Project: PhD

• Enzyme assisted Carbon Dioxide Capture

  Zaghini, A. (PhD Student), Westh, P. (Main Supervisor) & Badino, S. F. (Supervisor)

  01/04/2024 → 31/03/2027

  Project: PhD

• The impact of metabolic syndrome on antiviral immunity after influenza A virus infection - establishing the Ossabaw minipig model

  Henriksen, B. L. (PhD Student), Skovgaard, K. (Main Supervisor), Brogaard, L. (Supervisor), Heegaard, P. M. H. (Supervisor) & Cirera, S. (Supervisor)

  01/04/2024 → 31/03/2027

  Project: PhD

• OssaFLU: Impact of obesity-related metabolic syndrome on antiviral immunity and influenza A virus microevolution – exploration of mechanisms using the Ossabaw miniature pig model

  Skovgaard, K. (PI), Heegaard, P. M. H. (PI), Larsen, L. E. (PI), Brix, S. (PI), Madsen, B. L. (PI) & Short, K. (PI)

  01/04/2024 → 30/04/2027

  Project: Research