Optimized DADA2 pipeline for 16S rRNA gene sequencing using IonTorrent

Mortensen, M. S. (Other)

Activity: Other

Description

Software posted on 2023-04-21, 14:06 authored by Martin Steen Mortensen
Implementation of DADA2 for iontorrent 16S rRNA gene sequencing data as used research group for Gut, Microbe, and Health at National Food Institute, Technical University of Denmark.

The pipeline applies the current best practices for running DADA2 analysis of sequencing data from the IonTorrent platform, in a reproducible manner.

Period	21 Apr 2023

Keywords

Bioinformatics
pipeline
DADA2
Microbiome

Documents & Links

Software posted on 2023-04-21, 14:06 authored by Martin Steen Mortensen Implementation of DADA2 for iontorrent 16S rRNA gene sequencing data as used research group for Gut, Microbe, and Health at National Food Institute, Technical University of Denmark. The pipeline applies the current best practices for running DADA2 analysis of sequencing data from the IonTorrent platform, in a reproducible manner.