Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium

Publication: Research - peer-reviewJournal article – Annual report year: 2011

Standard

Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. / Samson, R.A.; Yilmaz, N.; Houbraken, J.; Spierenburg, H.; Seifert, K.A.; Peterson, S.W.; Varga, J.; Frisvad, Jens Christian.

In: Studies in Mycology, Vol. 70, 2011, p. 159-184.

Publication: Research - peer-reviewJournal article – Annual report year: 2011

Harvard

Samson, RA, Yilmaz, N, Houbraken, J, Spierenburg, H, Seifert, KA, Peterson, SW, Varga, J & Frisvad, JC 2011, 'Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium' Studies in Mycology, vol 70, pp. 159-184., 10.3114/sim.2011.70.04

APA

Samson, R. A., Yilmaz, N., Houbraken, J., Spierenburg, H., Seifert, K. A., Peterson, S. W., ... Frisvad, J. C. (2011). Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Studies in Mycology, 70, 159-184. 10.3114/sim.2011.70.04

CBE

Samson RA, Yilmaz N, Houbraken J, Spierenburg H, Seifert KA, Peterson SW, Varga J, Frisvad JC. 2011. Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Studies in Mycology. 70:159-184. Available from: 10.3114/sim.2011.70.04

MLA

Vancouver

Samson RA, Yilmaz N, Houbraken J, Spierenburg H, Seifert KA, Peterson SW et al. Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Studies in Mycology. 2011;70:159-184. Available from: 10.3114/sim.2011.70.04

Author

Samson, R.A.; Yilmaz, N.; Houbraken, J.; Spierenburg, H.; Seifert, K.A.; Peterson, S.W.; Varga, J.; Frisvad, Jens Christian / Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium.

In: Studies in Mycology, Vol. 70, 2011, p. 159-184.

Publication: Research - peer-reviewJournal article – Annual report year: 2011

Bibtex

@article{d6d5e018496344aebef895494601d9af,
title = "Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium",
keywords = "DNA phylogeny, Teleomorph, Single name nomenclature, Anamorph, Trichocomaceae",
publisher = "Centraalbureau voor Schimmelcultures",
author = "R.A. Samson and N. Yilmaz and J. Houbraken and H. Spierenburg and K.A. Seifert and S.W. Peterson and J. Varga and Frisvad, {Jens Christian}",
note = "This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.",
year = "2011",
doi = "10.3114/sim.2011.70.04",
volume = "70",
pages = "159--184",
journal = "Studies in Mycology",
issn = "0166-0616",

}

RIS

TY - JOUR

T1 - Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium

A1 - Samson,R.A.

A1 - Yilmaz,N.

A1 - Houbraken,J.

A1 - Spierenburg,H.

A1 - Seifert,K.A.

A1 - Peterson,S.W.

A1 - Varga,J.

A1 - Frisvad,Jens Christian

AU - Samson,R.A.

AU - Yilmaz,N.

AU - Houbraken,J.

AU - Spierenburg,H.

AU - Seifert,K.A.

AU - Peterson,S.W.

AU - Varga,J.

AU - Frisvad,Jens Christian

PB - Centraalbureau voor Schimmelcultures

PY - 2011

Y1 - 2011

N2 - The taxonomic history of anamorphic species attributed to Penicillium subgenus Biverticillium is reviewed, along with evidence supporting their relationship with teleomorphic species classified in Talaromyces. To supplement previous conclusions based on ITS, SSU and/or LSU sequencing that Talaromyces and subgenus Biverticillium comprise a monophyletic group that is distinct from Penicillium at the generic level, the phylogenetic relationships of these two groups with other genera of Trichocomaceae was further studied by sequencing a part of the RPB1 (RNA polymerase II largest subunit) gene. Talaromyces species and most species of Penicillium subgenus Biverticillium sensu Pitt reside in a monophyletic clade distant from species of other subgenera of Penicillium. For detailed phylogenetic analysis of species relationships, the ITS region (incl. 5.8S nrDNA) was sequenced for the available type strains and/or representative isolates of Talaromyces and related biverticillate anamorphic species. Extrolite profiles were compiled for all type strains and many supplementary cultures. All evidence supports our conclusions that Penicillium subgenus Biverticillium is distinct from other subgenera in Penicillium and should be taxonomically unified with the Talaromyces species that reside in the same clade. Following the concepts of nomenclatural priority and single name nomenclature, we transfer all accepted species of Penicillium subgenus Biverticillium to Talaromyces. A holomorphic generic diagnosis for the expanded concept of Talaromyces, including teleomorph and anamorph characters, is provided. A list of accepted Talaromyces names and newly combined Penicillium names is given. Species of biotechnological and medical importance, such as P. funiculosum and P. marneffei, are now combined in Talaromyces. Excluded species and taxa that need further taxonomic study are discussed. An appendix lists other generic names, usually considered synonyms of Penicillium sensu lato that were considered prior to our adoption of the name Talaromyces.

AB - The taxonomic history of anamorphic species attributed to Penicillium subgenus Biverticillium is reviewed, along with evidence supporting their relationship with teleomorphic species classified in Talaromyces. To supplement previous conclusions based on ITS, SSU and/or LSU sequencing that Talaromyces and subgenus Biverticillium comprise a monophyletic group that is distinct from Penicillium at the generic level, the phylogenetic relationships of these two groups with other genera of Trichocomaceae was further studied by sequencing a part of the RPB1 (RNA polymerase II largest subunit) gene. Talaromyces species and most species of Penicillium subgenus Biverticillium sensu Pitt reside in a monophyletic clade distant from species of other subgenera of Penicillium. For detailed phylogenetic analysis of species relationships, the ITS region (incl. 5.8S nrDNA) was sequenced for the available type strains and/or representative isolates of Talaromyces and related biverticillate anamorphic species. Extrolite profiles were compiled for all type strains and many supplementary cultures. All evidence supports our conclusions that Penicillium subgenus Biverticillium is distinct from other subgenera in Penicillium and should be taxonomically unified with the Talaromyces species that reside in the same clade. Following the concepts of nomenclatural priority and single name nomenclature, we transfer all accepted species of Penicillium subgenus Biverticillium to Talaromyces. A holomorphic generic diagnosis for the expanded concept of Talaromyces, including teleomorph and anamorph characters, is provided. A list of accepted Talaromyces names and newly combined Penicillium names is given. Species of biotechnological and medical importance, such as P. funiculosum and P. marneffei, are now combined in Talaromyces. Excluded species and taxa that need further taxonomic study are discussed. An appendix lists other generic names, usually considered synonyms of Penicillium sensu lato that were considered prior to our adoption of the name Talaromyces.

KW - DNA phylogeny

KW - Teleomorph

KW - Single name nomenclature

KW - Anamorph

KW - Trichocomaceae

U2 - 10.3114/sim.2011.70.04

DO - 10.3114/sim.2011.70.04

JO - Studies in Mycology

JF - Studies in Mycology

SN - 0166-0616

VL - 70

SP - 159

EP - 184

ER -