Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability

Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

Standard

Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability. / Alistar, Mirela; Pop, Paul; Madsen, Jan.

2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). IEEE, 2012. p. 53-58.

Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

Harvard

Alistar, M, Pop, P & Madsen, J 2012, 'Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability'. in 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). IEEE, pp. 53-58.

APA

Alistar, M., Pop, P., & Madsen, J. (2012). Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability. In 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). (pp. 53-58). IEEE.

CBE

Alistar M, Pop P, Madsen J. 2012. Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability. In 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). IEEE. pp. 53-58.

MLA

Alistar, Mirela, Paul Pop, and Jan Madsen "Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability". 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). IEEE. 2012. 53-58.

Vancouver

Alistar M, Pop P, Madsen J. Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability. In 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). IEEE. 2012. p. 53-58.

Author

Alistar, Mirela; Pop, Paul; Madsen, Jan / Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability.

2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP). IEEE, 2012. p. 53-58.

Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

Bibtex

@inbook{4dd97125015f4eefa0b25c8bc3f49cf4,
title = "Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability",
publisher = "IEEE",
author = "Mirela Alistar and Paul Pop and Jan Madsen",
year = "2012",
isbn = "978-1-4673-0785-7",
pages = "53-58",
booktitle = "2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP)",

}

RIS

TY - GEN

T1 - Online Synthesis for Error Recovery in Digital Microfluidic Biochips with Operation Variability

A1 - Alistar,Mirela

A1 - Pop,Paul

A1 - Madsen,Jan

AU - Alistar,Mirela

AU - Pop,Paul

AU - Madsen,Jan

PB - IEEE

PY - 2012

Y1 - 2012

N2 - Microfluidic-based biochips are replacing the conventional biochemical analyzers, and are able to integrate on-chip all the necessary functions for biochemical analysis using microfluidics. The digital microfluidic biochips are based on the manipulation of liquids not as a continuous flow, but as discrete droplets. Researchers have presented approaches for the synthesis of digital microfluidic biochips, which, starting from a biochemical application and a given biochip architecture, determine the allocation, resource binding, scheduling, placement and routing of the operations in the application. The droplet volumes can vary erroneously due to parametric faults, thus impacting negatively the correctness of the application. Researchers have proposed approaches that synthesize offline predetermined recovery subroutines, which are activated online when errors occur. In this paper, we propose an online synthesis strategy, which determines the appropriate recovery actions at the moment when faults are detected. We have also proposed a biochemical application model which can capture both time-redundant and space-redundant recovery operations. Experiments performed on three real-life case studies show that, by taking into account the biochip configuration when errors occur, our online synthesis is able to reduce the application times.

AB - Microfluidic-based biochips are replacing the conventional biochemical analyzers, and are able to integrate on-chip all the necessary functions for biochemical analysis using microfluidics. The digital microfluidic biochips are based on the manipulation of liquids not as a continuous flow, but as discrete droplets. Researchers have presented approaches for the synthesis of digital microfluidic biochips, which, starting from a biochemical application and a given biochip architecture, determine the allocation, resource binding, scheduling, placement and routing of the operations in the application. The droplet volumes can vary erroneously due to parametric faults, thus impacting negatively the correctness of the application. Researchers have proposed approaches that synthesize offline predetermined recovery subroutines, which are activated online when errors occur. In this paper, we propose an online synthesis strategy, which determines the appropriate recovery actions at the moment when faults are detected. We have also proposed a biochemical application model which can capture both time-redundant and space-redundant recovery operations. Experiments performed on three real-life case studies show that, by taking into account the biochip configuration when errors occur, our online synthesis is able to reduce the application times.

SN - 978-1-4673-0785-7

BT - 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP)

T2 - 2012 Symposium on Design, Test, Integration and Packaging of MEMS/MOEMS (DTIP)

SP - 53

EP - 58

ER -