'Dicty dynamics': Dictyostelium motility as persistent random motion

Publication: Research - peer-reviewJournal article – Annual report year: 2011

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'Dicty dynamics': Dictyostelium motility as persistent random motion. / Li, Liang; Cox, Edward C; Flyvbjerg, Henrik.

In: Physical Biology, Vol. 8, No. 4, 2011, p. 046006.

Publication: Research - peer-reviewJournal article – Annual report year: 2011

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Li, Liang; Cox, Edward C; Flyvbjerg, Henrik / 'Dicty dynamics': Dictyostelium motility as persistent random motion.

In: Physical Biology, Vol. 8, No. 4, 2011, p. 046006.

Publication: Research - peer-reviewJournal article – Annual report year: 2011

Bibtex

@article{d857835aec874dccad78d17dc29b2176,
title = "'Dicty dynamics': Dictyostelium motility as persistent random motion",
keywords = "Cell aggregation, Cell locomotion, chemotaxis, Diffusion, Markov processes",
author = "Liang Li and Cox, {Edward C} and Henrik Flyvbjerg",
year = "2011",
doi = "10.1088/1478-3975/8/4/046006",
volume = "8",
number = "4",
pages = "046006",
journal = "Physical Biology",
issn = "14783975",

}

RIS

TY - JOUR

T1 - 'Dicty dynamics': Dictyostelium motility as persistent random motion

A1 - Li,Liang

A1 - Cox,Edward C

A1 - Flyvbjerg,Henrik

AU - Li,Liang

AU - Cox,Edward C

AU - Flyvbjerg,Henrik

PY - 2011

Y1 - 2011

N2 - <p>We model the motility of Dictyostelium cells in a systematic data-driven manner. We deduce a minimal dynamical model that reproduces the statistical features of experimental trajectories. These are trajectories of the centroid of the cell perimeter, which is more sensitive to pseudopod activity than the usual tracking by centroid or nucleus. Our data account for cell individuality and dictate a model that extends the cell-type specific models recently derived for mammalian cells. Two generalized Langevin equations model stochastic periodic pseudopod motion parallel and orthogonal to the amoeba's direction of motion. This motion propels the amoeba with a random periodic left–right waddle in a direction that has a long persistence time. The model fully accounts for the statistics of the experimental trajectories, including velocity power spectra and auto-correlations, non-Gaussian velocity distributions, and multiplicative noise. Thus, we find neither need nor place in our data for an interpretation in terms of anomalous diffusion. The model faithfully captures cell individuality as different parameter values in the model, and serves as a basis for integrating the local mechanics of cell motion with our observed long-term behavior.</p>

AB - <p>We model the motility of Dictyostelium cells in a systematic data-driven manner. We deduce a minimal dynamical model that reproduces the statistical features of experimental trajectories. These are trajectories of the centroid of the cell perimeter, which is more sensitive to pseudopod activity than the usual tracking by centroid or nucleus. Our data account for cell individuality and dictate a model that extends the cell-type specific models recently derived for mammalian cells. Two generalized Langevin equations model stochastic periodic pseudopod motion parallel and orthogonal to the amoeba's direction of motion. This motion propels the amoeba with a random periodic left–right waddle in a direction that has a long persistence time. The model fully accounts for the statistics of the experimental trajectories, including velocity power spectra and auto-correlations, non-Gaussian velocity distributions, and multiplicative noise. Thus, we find neither need nor place in our data for an interpretation in terms of anomalous diffusion. The model faithfully captures cell individuality as different parameter values in the model, and serves as a basis for integrating the local mechanics of cell motion with our observed long-term behavior.</p>

KW - Cell aggregation

KW - Cell locomotion, chemotaxis

KW - Diffusion

KW - Markov processes

U2 - 10.1088/1478-3975/8/4/046006

DO - 10.1088/1478-3975/8/4/046006

JO - Physical Biology

JF - Physical Biology

SN - 14783975

IS - 4

VL - 8

SP - 046006

ER -