Bayesian model comparison in nonlinear BOLD fMRI hemodynamics
Publication: Research - peer-review › Journal article – Annual report year: 2008
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Bayesian model comparison in nonlinear BOLD fMRI hemodynamics. / Jacobsen, Danjal Jakup; Hansen, Lars Kai; Madsen, Kristoffer Hougaard.
In: Neural Computation, Vol. 20, No. 3, 2008, p. 738-755.Publication: Research - peer-review › Journal article – Annual report year: 2008
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TY - JOUR
T1 - Bayesian model comparison in nonlinear BOLD fMRI hemodynamics
A1 - Jacobsen,Danjal Jakup
A1 - Hansen,Lars Kai
A1 - Madsen,Kristoffer Hougaard
AU - Jacobsen,Danjal Jakup
AU - Hansen,Lars Kai
AU - Madsen,Kristoffer Hougaard
PB - M I T Press
PY - 2008
Y1 - 2008
N2 - Nonlinear hemodynamic models express the BOLD (blood oxygenation level dependent) signal as a nonlinear, parametric functional of the temporal sequence of local neural activity. Several models have been proposed for both the neural activity and the hemodynamics. We compare two such combined models: the original balloon model with a square-pulse neural model (Friston, Mechelli, Turner, & Price, 2000) and an extended balloon model with a more sophisticated neural model (Buxton, Uludag, Dubowitz, & Liu, 2004). We learn the parameters of both models using a Bayesian approach, where the distribution of the parameters conditioned on the data is estimated using Markov chain Monte Carlo techniques. Using a split-half resampling procedure (Strother, Anderson, & Hansen, 2002), we compare the generalization abilities of the models as well as their reproducibility for both synthetic and real data, recorded from two different visual stimulation paradigms. The results show that the simple model is the better one for these data.
AB - Nonlinear hemodynamic models express the BOLD (blood oxygenation level dependent) signal as a nonlinear, parametric functional of the temporal sequence of local neural activity. Several models have been proposed for both the neural activity and the hemodynamics. We compare two such combined models: the original balloon model with a square-pulse neural model (Friston, Mechelli, Turner, & Price, 2000) and an extended balloon model with a more sophisticated neural model (Buxton, Uludag, Dubowitz, & Liu, 2004). We learn the parameters of both models using a Bayesian approach, where the distribution of the parameters conditioned on the data is estimated using Markov chain Monte Carlo techniques. Using a split-half resampling procedure (Strother, Anderson, & Hansen, 2002), we compare the generalization abilities of the models as well as their reproducibility for both synthetic and real data, recorded from two different visual stimulation paradigms. The results show that the simple model is the better one for these data.
U2 - 10.1162/neco.2007.07-06-282
DO - 10.1162/neco.2007.07-06-282
JO - Neural Computation
JF - Neural Computation
SN - 0899-7667
IS - 3
VL - 20
SP - 738
EP - 755
ER -