Simon Rasmussen

  1. 2018
  2. Published

    Ancient pathogen DNA in human teeth and petrous bones. / Margaryan, Ashot; Hansen, Henrik B.; Rasmussen, Simon; Sikora, Martin; Moiseyev, Vyacheslav; Khoklov, Alexandr; Epimakhov, Andrey; Yepiskoposyan, Levon; Kriiska, Aivar; Varul, Liivi; Saag, Lehti; Lynnerup, Niels; Willerslev, Eske; Allentoft, Morten E.

    In: Ecology and Evolution, Vol. 8, No. 6, 2018, p. 3534-3542.

    Publication: Research - peer-reviewJournal article – Annual report year: 2018

  3. Accepted/In press

    Biosynthesis of bioactive diterpenoids in the medicinal plant Vitex agnus-castus. / Heskes, Allison Maree; Sundram, Tamil C M; Boughton, Berin Alain; Jensen, Niels Bjerg; Hansen, Nikolaj Lervad; Crocoll, Christoph; Cozzi, Federico; Rasmussen, Simon; Hamberger, Britta; Hamberger, Björn; Stærk, Dan ; Møller, Birger Lindberg; Pateraki, Irini.

    In: Plant Journal, 2018.

    Publication: Research - peer-reviewJournal article – Annual report year: 2018

  4. Published

    Origins and genetic legacies of the Caribbean Taino. / Schroeder, Hannes; Sikora, Martin; Gopalakrishnan, Shyam; Cassidy, Lara M.; Delserc, Pierpaolo Maisano; Velasco, Marcela Sandoval; Schraiber, Joshua G.; Rasmussen, Simon; Homburger, Julian R.; Avila-Arcos, Maria C.; Allentoft, Morten E.; Moreno-Mayar, J. Victor; Renaud, Gabriel; Gomez-Carballa, Alberto; Laffoon, Jason E.; Hopkins, Rachel J. A.; Higham, Thomas F. G.; Carr, Robert S.; Schaffer, William C.; Day, Jane S.; Hoogland, Menno; Salas, Antonio; Bustamante, Carlos D.; Nielsen, Rasmus; Bradley, Daniel G.; Hofman, Corinne L.; Willerslev, Eske.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, No. 10, 2018, p. 2341-2346.

    Publication: Research - peer-reviewJournal article – Annual report year: 2018

  5. 2017
  6. Published

    Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion. / Gonzalez-Izarzugaza, Jose Maria; Skov, Laurits; Maretty, Lasse; Jensen, Jacob Malte; Petersen, Bent; Andreas Sibbesen, Jonas; Liu, Siyang; Villesen, Palle ; Belling, Kirstine González-Izarzugaza; Theil Have, Christian; Gonzalez-Izarzugaza, Jose Maria; Grosjean, Marie; Bork-Jensen, Jette; Grove, Jakob; Als, Thomas D.; Huang, Shujia; Chang, Yuqi; Xu, Ruiqi; Ye, Weijian ; Rao, Junhua ; Guo, Xiaosen; Sun, Jihua; Cao, Hongzhi; Ye, Chen; van Beusekom, Johan; Espeseth, Thomas; Flindt, Esben; Friborg, Rune M. ; Halager, Anders E.; Le Hellard, Stephanie; Hultman, Christina M.; Lescai, Francesco; Li, Shengting; Lund, Ole; Løngren, Peter; Mailund, Thomas; Matey-Hernandez, María Luisa; Mors, Ole; Pedersen, Christian N. S.; Sicheritz-Pontén, Thomas; Sullivan, Patrick F.; Qaswar Ali Shah, Syed; Westergaard, David; Yadav, Rachita; Li, Ning; Xu, Xun; Hansen, Torben; Krogh, Anders; Bolund, Lars; Sørensen, Thorkild I. A.; Pedersen, Oluf; Gupta, Ramneek; Rasmussen, Simon; Besenbacher, Søren; Børglum, Anders D.; Wang, Jun; Eiberg, Hans; Kristiansen, Karsten; Brunak, Søren; Schierup, Mikkel Heide.

    In: P L o S Genetics, Vol. 13, No. 8, e1006834, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  7. Published

    Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers. / Sikora, Martin; Seguin-Orlando, Andaine; Sousa, Vitor C.; Albrechtsen, Anders; Korneliussen, Thorfinn; Ko, Amy; Rasmussen, Simon; Dupanloup, Isabelle; Nigst, Philip R.; Bosch, Marjolein D.; Renaud, Gabriel; Allentoft, Morten E.; Margaryan, Ashot; Vasilyev, Sergey V.; Veselovskaya, Elizaveta V.; Borutskaya, Svetlana B.; Deviese, Thibaut; Comeskey, Dan; Higham, Tom; Manica, Andrea; Foley, Robert; Meltzer, David J.; Nielsen, Rasmus; Excoffier, Laurent; Lahr, Marta Mirazon; Orlando, Ludovic; Willerslev, Eske.

    In: Science, Vol. 358, No. 6363, eaao1807, 2017, p. 659-662.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  8. Published

    Discovery and description of complete ammonium oxidizers in groundwater-fed rapid sand filters. / Palomo, Alejandro; Smets, Barth F. (Main supervisor); Sicheritz-Pontén, Thomas (Main supervisor); Rasmussen, Simon (Supervisor); Bælum, Jacob (Supervisor).

    Kgs. Lyngby : Department of Environmental Engineering, Technical University of Denmark (DTU), 2017. 61 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2017

  9. Published

    Gene expression plasticity across hosts of an invasive scale insect species. / Christodoulides, Nicholas; Van Dam, Alex; Peterson, Daniel A.; Frandsen, Rasmus John Normand; Mortensen, Uffe Hasbro; Petersen, Bent; Rasmussen, Simon; Normark, Benjamin B.; Hardy, Nate B.

    In: P L o S One, Vol. 12, No. 5, e0176956, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  10. Published
  11. Published

    Genomic characterization, phylogenetic analysis, and identification of virulence factors in Aerococcus sanguinicola and Aerococcus urinae strains isolated from infection episodes. / Carkaci, Derya; Højholt, Katrine; Nielsen, Xiaohui Chen; Dargis, Rimtas; Rasmussen, Simon; Skovgaard, Ole; Fuursted, Kurt; Andersen, Paal Skytt; Stegger, Marc; Christensen, Jens Jørgen.

    In: Microbial Pathogenesis, Vol. 112, 2017, p. 327-340.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  12. Published

    In silico assessment of virulence factors in strains of Streptococcus oralis and Streptococcus mitis isolated from patients with Infective Endocarditis. / Rasmussen, Louise H.; Iversen, Katrine Højholt; Dargis, Rimtas; Christensen, Jens Jørgen; Skovgaard, Ole; Justesen, Ulrik Stenz; Rosenvinge, Flemming S.; Moser, Claus; Lukjancenko, Oksana; Rasmussen, Simon; Nielsen, Xiaohui C.

    In: Journal of Medical Microbiology, Vol. 66, 2017, p. 1316-1323.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

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