Peter Ruhdal Jensen

  1. 2014
  2. Published

    Acetate Kinase Isozymes Confer Robustness in Acetate Metabolism. / Chan, Siu Hung Joshua; Nørregaard, Lasse; Solem, Christian; Jensen, Peter Ruhdal.

    In: PLOS ONE, Vol. 9, No. 3, e92256, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  3. Published

    Estimating biological elementary flux modes that decompose a flux distribution by the minimal branching property. / Chan, S.H.; Solem, Christian; Jensen, Peter Ruhdal; Ji, P.

    In: Bioinformatics, Vol. 30, No. 22, 2014, p. 3232-3239.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  4. Published

    Identification of Metabolic Pathways Essential for Fitness of Salmonella Typhimurium In Vivo. / Jelsbak, Lotte; Hartman, Hassan ; Schroll, Casper; Rosenkrantz, Jesper Tjørnholt; Lemire, Sebastien; Wallrodt, Inke; Thomsen, Line Elnif; Poolman, Mark ; Kilstrup, Mogens; Jensen, Peter Ruhdal; Olsen, John E.

    In: P L o S One, Vol. 9, No. 7, e101869, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  5. Published

    Identification of potential drug targets in Salmonella enterica sv. Typhimurium using metabolic modelling and experimental validation. / Hartman, Hassan B.; Fell, David A.; Rossell, Sergio; Jensen, Peter Ruhdal; Woodward, Martin J.; Thorndahl, Lotte; Jelsbak, Lotte; Elmerdahl Olsen, John ; Raghunathan, Anu; Daefler, Simon; Poolman, Mark G.

    In: Microbiology, Vol. 160, No. 6, 2014, p. 1252-1266.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  6. Published

    Polyamines are essential for virulence in Salmonella enterica serovar Gallinarum despite evolutionary decay of polyamine biosynthesis genes. / Schroll, Casper; Christensen, Jens P.; Christensen, Henrik; Pors, Susanne E.; Thorndahl, Lotte; Jensen, Peter Ruhdal; Olsen, John E.; Jelsbak, Lotte.

    In: Veterinary Microbiology, Vol. 170, No. 1-2, 2014, p. 144-150.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  7. Published
  8. Published
  9. 2013
  10. Published

    Complete Genome Sequence of Pediococcus pentosaceus Strain SL4. / Dantoft, Shruti Harnal; Bielak, Eliza Maria; Seo, Jae-Gu; Chung, Myung-Jun; Jensen, Peter Ruhdal.

    In: Genome Announcements, Vol. 1, No. 6, e01106-13, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  11. Published
  12. Published
  13. Published
  14. Published
  15. Published

    Rewiring Lactococcus lactis for Ethanol Production. / Solem, Christian; Dehli, Tore Ibsen; Jensen, Peter Ruhdal.

    In: Applied and Environmental Microbiology, Vol. 79, No. 8, 2013, p. 2512-2518.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  16. Published

    Stochastic Differential Equations in Artificial Pancreas Modelling. / Duun-Henriksen, Anne Katrine; Madsen, Henrik (Main supervisor); Jensen, Peter Ruhdal (Supervisor).

    Kgs. Lyngby : Technical University of Denmark, 2013. 200 p. (PHD-2013; No. 308).

    Publication: ResearchPh.D. thesis – Annual report year: 2013

  17. 2012
  18. Published

    Bioconversion of crude glycerol feedstocks into ethanol by Pachysolen tannophilus. / Liu, Xiaoying; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Bioresource Technology, Vol. 104, 2012, p. 559-586.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  19. Published

    Conversion of the biodiesel by-product glycerol by the non-conventional yeast Pachysolen tannophilus. / Liu, Xiaoying ; Jensen, Peter Ruhdal (Supervisor); Workman, Mhairi (Main supervisor).

    Kgs. Lyngby : Technical University of Denmark, 2012. 93 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2012

  20. Published

    Draft Genome Sequence of the Yeast Pachysolen tannophilus CBS 4044/NRRL Y-2460. / Liu, Xiaoying ; Kaas, Rolf Sommer; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Eukaryotic Cell (Online Edition), Vol. 11, No. 6, 2012, p. 827.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  21. Published

    Overnight Control of Blood Glucose in People with Type 1 Diabetes. / Boiroux, Dimitri; Duun-Henriksen, Anne Katrine; Schmidt, Signe; Nørgaard, Kirsten; Madsbad, Sten; Skyggebjerg, Ole; Jensen, Peter Ruhdal; Poulsen, Niels Kjølstad; Madsen, Henrik; Jørgensen, John Bagterp.

    Biological and Medical Systems. Vol. 8 2012. p. 73-78 (IFAC Proceedings Volumes (IFAC-PapersOnline) ).

    Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

  22. Published

    Polyamines Are Required for Virulence in Salmonella enterica Serovar Typhimurium. / Jelsbak, Lotte; Thomsen, Line Elnif; Wallrodt, Inke; Jensen, Peter Ruhdal; Olsen, John Elmerdahl.

    In: P L o S One, Vol. 7, No. 4, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  23. Published

    Tunable promoters in synthetic and systems biology.. / Dehli, Tore; Solem, Christian; Jensen, Peter Ruhdal.

    In: Sub-cellular biochemistry., Vol. 64, 2012, p. 181-201.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  24. Published

    Tuning of Controller for Type 1 Diabetes Treatment with Stochastic Differential Equations. / Duun-Henriksen, Anne Katrine; Boiroux, Dimitri; Schmidt, Signe; Skyggebjerg, Ole; Madsbad, Sten; Jensen, Peter Ruhdal; Jørgensen, John Bagterp; Poulsen, Niels Kjølstad; Nørgaard, Kirsten; Madsen, Henrik.

    Biological and Medical Systems. Vol. 8 2012. p. 46-51 (IFAC Proceedings Volumes (IFAC-PapersOnline) ).

    Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

  25. 2011
  26. Published

    Bacillus subtilis Two-Component System Sensory Kinase DegS Is Regulated by Serine Phosphorylation in Its Input Domain. / Jers, Carsten; Kobir, Ahasanul; Søndergaard, Elsebeth Oline; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: P L o S One, Vol. 6, No. 2, 2011, p. e14653.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  27. Published

    The construction of a library of synthetic promoters revealed some specific features of strong Streptomyces promoters. / Seghezzi, Nicolas; Amar, Patrick; Købmann, Brian; Jensen, Peter Ruhdal; Virolle, Marie-Joëlle.

    In: Applied Microbiology and Biotechnology, Vol. 90, No. 2, 2011, p. 615-623.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  28. Published

    Towards a quantitative prediction of the fluxome from the proteome. / Rossell, Sergio; Solem, Christian; Jensen, Peter Ruhdal; Heijnen, Joseph J.

    In: Metabolic Engineering, Vol. 13, No. 3, 2011, p. 253-262.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  29. 2010
  30. Published

    Protein-Tyrosine Phosphorylation in Bacillus Subtilis Signal Transduction. / Jers, Carsten; Mijakovic, Ivan (Supervisor); Jensen, Peter Ruhdal (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: ResearchPh.D. thesis – Annual report year: 2010

  31. Published

    Bacillus subtilis BY-kinase PtkA controls enzyme activity and localization of its protein substrates. / Jers, Carsten; Pedersen, Malene Mejer; Paspaliari, Dafni Katerina; Schutz, W.; Johnsson, Christina; Soufi, Boumediene; Macek, B.; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: Molecular Microbiology, Vol. 77, No. 2, 2010, p. 287-299.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  32. Published

    Metabolic and Transcriptional Response to Cofactor Perturbations in Escherichia coli. / Holm, Anders Koefoed; Blank, L.M.; Oldiges, M.; Schmid, A.; Solem, Christian; Jensen, Peter Ruhdal; Vemuri, G.N.

    In: Journal of Biological Chemistry, Vol. 285, No. 23, 2010, p. 17498-17506.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  33. Published
  34. Published

    The MG1363 and IL1403 Laboratory Strains of Lactococcus lactis and Several Dairy Strains Are Diploid. / Michelsen, Ole; Hansen, Flemming G.; Albrechtsen, B.; Jensen, Peter Ruhdal.

    In: Journal of Bacteriology, Vol. 192, No. 4, 2010, p. 1058-1065.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  35. 2009
  36. Published

    Control analysis of the purine biosynthesis in Lactococcus lactis. / Jessing, Stine Graakjær; Haaber, Jakob Brandt Borup; Jendresen, Christian Bille; Jensen, Peter Ruhdal; Kilstrup, Mogens.

    2009. Poster session presented at 7th Symposium of Food Microbiology, Helsingør, Denmark.

    Publication: ResearchPoster – Annual report year: 2009

  37. Published

    Control analysis of the purine biosynthesis in Lactococcus lactis. / Jessing, Stine Graakjær; Haaber, Jakob Brandt Borup; Jendresen, Christian Bille; Jensen, Peter Ruhdal; Kilstrup, Mogens.

    2009. Abstract from 3rd Congress of European Microbiologists, Goteborg, Sweden.

    Publication: ResearchConference abstract for conference – Annual report year: 2009

  38. Published

    DiaCon: an interdisciplinary approach to diabetes control. / Finan, Daniel Aaron; Duun-Christensen, Anne Katrine; Schmidt, Signe; Boiroux, Dimitri; Jørgensen, John Bagterp; Nørgaard, Kirsten; Jensen, Peter Ruhdal; Poulsen, Niels Kjølstad; Madsen, Henrik.

    2009. Poster session presented at Advanced Technology and Treatments for Diabetes Conference, .

    Publication: Research - peer-reviewPoster – Annual report year: 2009

  39. Published

    Engineering of Bacillus subtilis 168 for increased nisin resistance. / Hansen, Mette; Wangari, Romilda; Hansen, Egon Bech; Mijakovic, Ivan; Jensen, Peter Ruhdal.

    In: Applied and Environmental Microbiology, Vol. 75, No. 21, 2009, p. 6688-6695.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  40. 2008
  41. Published

    Co-factor engineering in lactobacilli: Effects of uncoupled ATPase activity on metabolic fluxes in Lactobacillus (L.) plantarum and L. sakei. / Rud, Ida; Solem, Christian; Jensen, Peter Ruhdal; Axelsson, Lars; Naterstad, Kristine.

    In: Metabolic Engineering, Vol. 10, No. 5, 2008, p. 207-215.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  42. Published

    Control analysis of the role of triosephosphate isomerase in glucose metabolism in Lactococcus lactis. / Solem, Christian; Købmann, Brian Jensen; Jensen, Peter Ruhdal.

    In: I E T Systems Biology, Vol. 2, No. 2, 2008, p. 64-72.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  43. Published

    Escherichia coli strains with promoter libraries constructed by Red/ET recombination pave the way for transcriptional fine tuning. / Braatsch, Stephan; Helmark, Søren; Kranz, Harald; Købmann, Brian Jensen; Jensen, Peter Ruhdal.

    In: BioTechniques, Vol. 45, No. 3, 2008, p. 335-337.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  44. Published

    Increased biomass yield of Lactococcus lactis during energetically limited growth and respiratory conditions. / Købmann, Brian Jensen; Blank, Lars Mathias; Solem, Christian; Petranovic, Dina; Nielsen, Lars K.; Jensen, Peter Ruhdal.

    In: Biotechnology and Applied Biochemistry, Vol. 50, 2008, p. 25-33.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  45. Published

    Online diagnosticering af bacteriofag-inficerede celler. / Michelsen, Ole; Jensen, Peter Ruhdal.

    In: Mælkeritidende, Vol. 4, 2008, p. 80-83.

    Publication: CommunicationJournal article – Annual report year: 2008

  46. Published
  47. Published
  48. Published

    The Ser/Thr/Tyr phosphoproteome of Lactococcus lactis IL1403 reveals multible phosphorylated proteins. / Soufi, Boumediene; Gnad, Florian; Jensen, Peter Ruhdal; Petranovic, Dina; Mann, Matthias; Mijakovic, Ivan; Macek, Boris.

    In: Proteomics, Vol. 8, No. 17, 2008, p. 3486-3493.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  49. 2007
  50. Published

    Bacillus subtilis strain deficient for the protein-tyrosine kinase PtkA exhibits impaired DNA replication. / Petranovic, Dina; Michelsen, Ole; Zahradka, K; Correia da Silva, Giovani Santos; Petranovic, M; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: Molecular Microbiology, Vol. 6, No. 63, 2007, p. 1797-1805.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  51. Published

    Detection of bacteriophage-infected cells of Lactococcus lactis using flow cytometry. / Michelsen, Ole; Cuesta-Dominguez, Álvaro; Albrektsen, Bjarne; Jensen, Peter Ruhdal.

    In: Applied and Environmental Microbiology, Vol. 73, No. 23, 2007, p. 7575-81.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  52. Published

    The las enzymes control pyruvate metabolism in Lactococcus lactis during growth on maltose. / Solem, Christian; Købmann, Brian Jensen; Yang, F; Jensen, Peter Ruhdal.

    In: Journal of Bacteriology, Vol. 189, No. 18, 2007, p. 6727-30.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  53. Published

    The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis. / Macek, B; Mijakovic, Ivan; Olsen, J V; Gnad, F; Kumar, C; Jensen, Peter Ruhdal; Mann, M.

    In: Molecular and Cellular Proteomics, No. 6, 2007, p. 697-707.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  54. 2006
  55. Published

    A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum. / Rud, I.; Jensen, Peter Ruhdal; Naterstad, K.; Axelsson, L.

    In: Microbiology, Vol. 152, No. 4, 2006, p. 1011-1019.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  56. Published

    Bacterial single-stranded DNA-binding proteins are phosphorylated on tyrosine.. / Mijakovic, Ivan; Petranovic, Dina; Macek, B; Cepo, T; Mann, M.; Davies, Jonathan Conrad; Jensen, Peter Ruhdal; Vujaklija, D.

    In: Nucleic Acids Research, Vol. 34, No. 5, 2006, p. 1588-1596.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  57. Published
  58. Published

    Genetics of Lactococci. / Gaudu, P.; Yamamoto, Y.; Jensen, Peter Ruhdal; Hammer, Karin; Gruss, A.

    Gram- positive Pathogens. 2006. p. 356-368.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2006

  59. Published

    Lactococcus lactis - traditional and GMO strains. / Jensen, Peter Ruhdal; Købmann, Brian Jensen; Solem, Christian.

    In: Toxicology Letters, Vol. 164, 2006, p. S317-S317.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2006

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