Ole Lund

  1. 2007
  2. Published

    Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction. / Larsen, Mette Voldby; Lundegaard, Claus; Lamberth, K.; Buus, S.; Lund, Ole; Nielsen, Morten.

    In: BMC Bioinformatics, Vol. 8, 2007, p. 424.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  3. Published

    Modeling the adaptive immune system: predictions and simulations. Bioinformatics.. / Lundegaard, Claus; Lund, Ole; Kesmir, Can; Brunak, Søren; Nielsen, Morten.

    In: Bioinformatics, No. 23, 2007, p. 3265-75.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  4. Published

    NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence. / Nielsen, Morten; Lundegaard, Claus; Blicher, Thomas; Lamberth, K.; Harndahl, M.; Justesen, S.; Roder, G.; Peters, B.; Sette, A.; Lund, Ole; Buus, S.

    In: PLoS ONE, No. 8, 2007, p. e796.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  5. Published

    Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method. / Nielsen, Morten; Lundegaard, Claus; Lund, Ole.

    In: BMC Bioinformatics, Vol. 8, 2007, p. 238.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  6. Published

    Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools. / Greenbaum, Jason A.; Andersen, Pernille; Blythe, Martin; Bui, Huynh-Hoa; Cachau, Raul E.; Crowe, James; Davies, Matthew; Kolaskar, A. S.; Lund, Ole; Morrison, Sherrie; Mumey, Brendan; Ofran, Yanay; Pellequer, Jean-Luc; Pinilla, Clemencia; Ponomarenko, Julia V.; Raghava, G. P. S.; van Regenmortel, Marc H.; Roggen, Erwin L.; Sette, Alessandro; Schlessinger, Avner; Sollner, Johannes; Zand, Martin; Peters, Bjoern.

    In: Journal of molecular recognition, No. 2, 2007, p. 75-82.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  7. 2006
  8. Published

    A community resource benchmarking predictions of peptide binding to MHC-I molecules. / Peters, B; Bui, HH; Pletscher-Frankild, Sune; Nielsen, Morten; Lundegaard, Claus; Kostem, E; Basch, D; Lamberth, K; Harndahl, M; Fleri, W; Wilson, SS; Sidney, J; Lund, Ole; Buus, S; Sette, Alessandro.

    In: PloS Computational Biology, Vol. 2, No. 6, 2006, p. 574-584.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  9. Published

    Epitope mapping and topographic analysis of VAR2CSA DBL3X involved in P-falciparum placental sequestration. / Dahlback, Madeleine; Rask, Thomas Salhøj; Andersen, Pernille; Nielsen, Morten A; Ndam, Nicaise T.; Resende, Mafalda; Turner, Louise; Deloron, Philippe; Hviid, Lars; Lund, Ole; Pedersen, Anders Gorm; Theander, Thor G.; Salanti, Ali.

    In: PLoS Pathogens, Vol. 2, No. 11, 2006, p. 1069-1082.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  10. Published

    Improved method for predicting linear B-cell epitopes. / Larsen, Jens Erik Pontoppidan; Lund, Ole; Nielsen, Morten.

    In: Immunome Research, Vol. 2, 2006, p. 2.

    Publication: ResearchJournal article – Annual report year: 2006

  11. Published
  12. Published

    Prediction of residues in discontinuous B-cell epitopes using protein 3D structures. / Andersen, P.H.; Nielsen, Morten; Lund, Ole.

    In: Protein Science, Vol. 15, No. 11, 2006, p. 2558-2567.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

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