Mette Voldby Larsen

  1. 2014
  2. Published

    Analysis of pan-genome content and its application in microbial identification. / Lukjancenko, Oksana; Ussery, David (Main supervisor); Larsen, Mette Voldby (Supervisor).

    Technical University of Denmark, 2014. 177 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  3. Published
  4. Published
  5. Published

    Improving biotech education through gamified laboratory simulations. / Bonde, Mads; Makransky, Guido; Wandall, Jakob; Larsen, Mette Voldby; Morsing, Mikkel; Jarmer, Hanne Østergaard; Sommer, Morten.

    In: Nature Biotechnology, Vol. 32, No. 7, 2014, p. 694-697.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  6. E-pub ahead of print

    In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing. / Carattoli, Alessandra; Zankari, Ea; García-Fernández, Aurora; Larsen, Mette Voldby; Lund, Ole; Villa, Laura; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Antimicrobial Agents and Chemotherapy, Vol. 58, No. 7, 2014, p. 3895-3903.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  7. Published

    The Good, the Bad and the Deadly : Characterisation of bacteria through DNA analysis. / Cosentino, Salvatore; Larsen, Mette Voldby (Main supervisor); Lund, Ole (Supervisor).

    Technical University of Denmark, 2014. 89 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  8. 2013
  9. Published

    Bioinformatics Identification of Antigenic Peptide: Predicting the Specificity of Major MHC Class I and II Pathway Players.. / Lund, Ole; Karosiene, Edita; Lundegaard, Claus; Larsen, Mette Voldby; Nielsen, Morten.

    Antigen Processing : Methods and Protocols. 2013. p. 247-260 (Methods in Molecular Biology, Vol. 960).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  10. Published
  11. Published

    Identification of Y-Chromosomally Encoded Minor Histocompatibility Antigens Using a Reverse Immunology Approach. / Mortensen, Bo Kok; Brændstrup, Peter; Larsen, Malene Erup; Larsen, Mette Voldby; Lund, Ole; Rasmussen, Michael; Buus, Søren; Stryhn, Anette; Vindeløv, Lars.

    In: Biology of Blood and Marrow Transplantation, Vol. 19, No. 2, 2013, p. S335.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2013

  12. Published

    Identification of Y-Chromosomally Encoded Minor Histocompatibility Antigens Using a Reverse Immunology Approach. / Mortensen, Bo Kok; Brændstrup, Peter; Larsen, Malene Erup; Larsen, Mette Voldby; Lund, Ole; Rasmussen, Michael; Buus, Søren; Stryhn, Anette; Vindeløv, Lars.

    In: Scandinavian Journal of Immunology, Vol. 77, No. 4, 2013, p. 317-318.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2013

  13. Published

    Internet-Based Solutions for Analysis of Next-Generation Sequence Data. / Larsen, Mette Voldby.

    In: Journal of Clinical Microbiology, Vol. 51, No. 9, 2013, p. 3162-3162.

    Publication: Research - peer-reviewLetter – Annual report year: 2013

  14. Published

    PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data.. / Cosentino, Salvatore; Larsen, Mette Voldby; Aarestrup, Frank Møller; Lund, Ole.

    In: PloS one., Vol. 8, No. 10, 2013, p. e77302.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  15. Published

    Targeting of conserved gag-epitopes in early HIV infection is associated with lower plasma viral load and slower CD4+ T cell depletion.. / Perez, Carina L. ; Milush, Jeffrey M. ; Buggert, Marcus; Eriksson, Emily M. ; Larsen, Mette Voldby; Liegler, Teri; Hartogensis, Wendy; Bacchetti, Peter; Lund, Ole; Hecht, Frederick M. ; Nixon, Douglas F. ; Karlsson, Annika C. .

    In: AIDS Research and Human Retroviruses, Vol. 29, No. 3, 2013, p. 602-612.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  16. 2012
  17. Published

    Analysis of cytotoxic T cell epitopes in relation to cancer. / Stranzl, Thomas; Brunak, Søren (Main supervisor); Larsen, Mette Voldby (Supervisor).

    Kgs. Lyngby : Technical University of Denmark, 2012. 97 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2012

  18. Published
  19. Published

    Identification of a Novel UTY‐Encoded Minor Histocompatibility Antigen. / Mortensen, B. K.; Rasmussen, A. H.; Larsen, Malene Erup; Larsen, Mette Voldby; Lund, Ole; Braendstrup, P.; Harndahl, Mikkel Nors; Rasmussen, M.; Buus, S.; Stryhn, A.; Vindeløv, Lars.

    In: Scandinavian Journal of Immunology, Vol. 76, No. 2, 2012, p. 141-150.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  20. Published
  21. Published
  22. 2011
  23. Published

    Human Leukocyte Antigen (HLA) Class I Restricted Epitope Discovery in Yellow Fewer and Dengue Viruses: Importance of HLA Binding Strength.. / Lund, Ole; Nascimento, Eduardo J. M.; Maciel, Milton, Jr; Nielsen, Morten; Larsen, Mette Voldby; Lundegaard, Claus; Harndahl, Mikkel; Lamberth, Kasper; Buus, Søren; Salmon, Jérôme; August, Thomas J.; Marques, Ernesto T A, Jr.

    In: P L o S One, Vol. 6, No. 10, 2011, p. e26494.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  24. Published

    Identification of MHC class II restricted T‐cell‐mediated reactivity against MHC class I binding Mycobacterium tuberculosis peptides. / Wang, Mingjun; Tang, Sheila Tuyet; Stryhn, Anette; Justesen, Sune; Larsen, Mette Voldby; Dziegiel, Morten H.; Lewinsohn, David M.; Buus, Søren; Lund, Ole; Claesson, Mogens H.

    In: Immunology, Vol. 132, No. 4, 2011, p. 482-491.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  25. 2010
  26. Published
  27. Published

    HLA Class I Binding 9mer Peptides from Influenza A Virus Induce CD4(+) T Cell Responses. / Wang, M. J.; Larsen, Mette Voldby; Nielsen, Morten; Harndahl, M.; Justesen, S.; Dziegiel, M.H.; Buus, S.; Tang, Sheila Tuyet; Lund, Ole; Claesson, M.H.

    In: P L o S One, Vol. 5, No. 5, 2010, p. e10533.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  28. Published

    Identification of CD8(+) T Cell Epitopes in the West Nile Virus Polyprotein by Reverse-Immunology Using NetCTL. / Larsen, Mette Voldby; Lelic, A.; Parsons, R.; Nielsen, Morten; Hoof, I.; Lamberth, K.; Loeb, M.B.; Buus, S.; Bramson, J.; Lund, Ole.

    In: P L o S One, Vol. 5, No. 9, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  29. Published

    NetCTLpan: pan-specific MHC class I pathway epitope predictions. / Stranzl, Thomas; Larsen, Mette Voldby; Lundegaard, Claus; Nielsen, Morten.

    In: Immunogenetics, Vol. 62, No. 6, 2010, p. 357-368.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  30. 2009
  31. Published
  32. 2008
  33. Published

    Broadly Immunogenic HLA Class I Supertype-Restricted Elite CTL Epitopes Recognized in a Diverse Population Infected with Different HIV-1 Subtypes. / Pérez, Carina L; Larsen, Mette Voldby; Gustafsson, Rasmus; Norström, Melissa M; Atlas, Ann; Nixon, Douglas F; Nielsen, Morten; Lund, Ole; Karlsson, Annika C.

    In: Journal of Immunology, Vol. 180, No. 7, 2008, p. 5092-5100.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  34. Published

    Genetic Variation in AKAP13 Is Associated with Increased Risk of Relapse after Allogeneic Hematopoietic Cell Transplantation Following Non-Myeloablative Conditioning. / Kornblit, B.; Masmas, T.; Madsen, H. O.; Larsen, Mette Voldby; Stryhn, A.; Buus, S.; Garred, P.; Vindelov, L.

    In: Blood, Vol. 112, No. 11, 2008, p. 1118-1119.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2008

  35. 2007
  36. Published
  37. Published

    CTL epitopes for influenza A including the H5N1 bird flu; genome-, pathogen-, and HLA-wide screening. / Wang, M.J.; Lamberth, K.; Harndahl, M.; Roder, G.; Stryhn, A.; Larsen, Mette Voldby; Nielsen, Morten; Lundegaard, Claus; Tang, Sheila Tuyet; Dziegiel, M.H.; Rosenkvist, J.; Pedersen, A.E.; Buus, Søren; Claesson, M.H.; Lund, Ole.

    In: Vaccine, Vol. 25, No. 15, 2007, p. 2823-2831.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  38. Published

    Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction. / Larsen, Mette Voldby; Lundegaard, Claus; Lamberth, K.; Buus, S.; Lund, Ole; Nielsen, Morten.

    In: BMC Bioinformatics, Vol. 8, 2007, p. 424.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  39. 2006
  40. Published

    TAP-independent MHC class I presentation.. / Larsen, Mette Voldby; Nielsen, Morten; Weinzierl, A; Lund, Ole.

    In: Current Immunology Reviews, Vol. 2, No. 3, 2006, p. 233-245.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  41. 2005
  42. Published
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