Markus Herrgard

Markus Herrgard

Professor

Kemitorvet

Building: 220, 227F

2800 Kgs.Lyngby

Denmark

iLoop Translational Core Research Unit

 

I'm the director of the iLoop Translational Core research unit at the NNF Center for Biosustainability. The iLoop (Iterative Cell Factory Development Loop) unit works on translational projects related to microbial cell factory engineering. The unit consists of four technology platforms led by team leaders providing specialized services to cell factory development projects in the iLoop Unit: 

  1. Screening and fermentation - Konstantin Schneider
  2. Analytics - Hanne Bjerre Christensen
  3. Design - Lasse Ebdrup Pedersen, Lars Schoning, and Niko Sonnenschein 
  4. Automation and automated genome engineering  - Olivier Bitterlin and Jerome Maury
  5. Genome engineering and project management - Rebecca Lennen

In total, the iLoop Unit employs over 30 interdiciplinary researchers, engineers and technicians.

 

More information on the iLoop is available here:  http://www.biosustain.dtu.dk/english/Research1/iLoop-Core-Unit

 


 

Research interests

 

My research work is focused on cell factory design using genome-scale models and mining of big biological datasets. More information can be found on the iLoop Design Unit page:  http://www.biosustain.dtu.dk/english/Research1/iLoop-Core-Unit/Design-Unit. I also coordinate the EU Horizon 2020 DD-DeCaF project focused on building bioinformatics services for data-driven desisign of cell factories and communities: http://dd-decaf.eu/

 

My publications:    Complete list of publications in Google Scholar

 

My CV: LinkedIn profile

CV

Education

1993 - 1998 M.Sc. - Aalto University, Finland
1999 - 2004 Ph.D. - University of California, San Diego

Academic grades

Ph.D.

Professional experience

2004 - 2006 Post-doctoral researcher - University of California, San Diego, Bioengineering
2006 - 2008 Project Scientist - University of California, San Diego, Bioengineering
2008 - 2012 Senior Scientist - Synthetic Genomics, Inc.
2012 - Group leader - DTU, Biosustain
2014 - iLoop Core Manager - DTU, Biosustain
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  • Metabolic Engineering

    ISSNs: 1096-7176, 1096-7176

    Additional searchable ISSN (Electronic): 1096-7184

    Academic Press, United States

    ISI indexed (2013): ISI indexed yes, BFI (2015): BFI-level 2, Scopus rating (2015): 3.655 1.751

    Central database

    Journal

  • Frontiers in Microbiology

    ISSNs: 1664-302X

    Frontiers Research Foundation, Switzerland

    ISI indexed (2013): ISI indexed no, BFI (2015): BFI-level 1, Scopus rating (2015): 1.97 1.187

    Central database

    Journal

  • P L o S One

    ISSNs: 1932-6203, 1932-6203

    Public Library of Science, United States

    ISI indexed (2013): ISI indexed yes, BFI (2015): BFI-level 1, Scopus rating (2015): 1.395 1.044

    Central database

    Journal

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