Markus Herrgard

Markus Herrgard

Professor

Kemitorvet

Building: 220, 227F

2800 Kgs. Lyngby

Denmark

I'm Director of Data Science and Automation at the Novo Nordisk Foundation Center for Biosustainability. In this role I'm responsible for developing data science and automation infrastructure to support our basic research as well as commercialization-oriented research.

 

My research work is focused on data science for cell factory development including:

  • development of workflows for high-throughput omics data generation
  • mining and visualization of big biological datasets, and
  • genome-scale modeling for cell factory design

 

Most of our research funding is from the Novo Nordisk Foundation, the European Commission Horizon 2020 program or Innovation Foundation Denmark. I coordinate the EU Horizon 2020 DD-DeCaF project focused on building bioinformatics services for data-driven desisign of cell factories and communities: http://dd-decaf.eu/ as well as project OLEFINE focusing on using cell factories to produce insect pheromones http://olefine.eu

 

My publications:    Complete list of publications in Google Scholar

 

My CV: LinkedIn profile

CV

Education

1993 - 1998 M.Sc. - Aalto University, Finland
1999 - 2004 Ph.D. - University of California, San Diego

Academic grades

Ph.D.

Professional experience

2004 - 2006 Post-doctoral researcher - University of California, San Diego, Bioengineering
2006 - 2008 Project Scientist - University of California, San Diego, Bioengineering
2008 - 2012 Senior Scientist - Synthetic Genomics, Inc.
2012 - Group leader - DTU, Biosustain
2014 - iLoop Core Manager - DTU, Biosustain
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Activities

(15)

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  • Metabolic Engineering

    ISSNs: 1096-7176

    Additional searchable ISSN (Electronic): 1096-7184

    Academic Press, United States

    BFI (2018): BFI-level 2, Scopus rating (2017): CiteScore 7.95 SJR 3.337 SNIP 1.787, Web of Science (2018): Indexed yes, ISI indexed (2013): ISI indexed yes

    Central database

    Journal

  • Frontiers in Microbiology

    ISSNs: 1664-302X

    Additional searchable ISSN (Electronic): 1664-302X

    Frontiers Media S.A., Switzerland

    BFI (2018): BFI-level 1, Scopus rating (2017): CiteScore 4.19 SJR 1.699 SNIP 1.174, Web of Science (2018): Indexed yes, ISI indexed (2013): ISI indexed no

    Indexed in DOAJ

    Central database

    Journal

  • P L o S One

    ISSNs: 1932-6203

    Additional searchable ISSN (Electronic): 1932-6203

    Public Library of Science, United States

    BFI (2018): BFI-level 1, Scopus rating (2017): CiteScore 3.01 SJR 1.164 SNIP 1.111, Web of Science (2018): Indexed yes, ISI indexed (2013): ISI indexed yes

    Indexed in DOAJ

    Central database

    Journal

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