Henrik Bjørn Nielsen

  1. 2016
  2. Published

    Colonic transit time relates to bacterial metabolism and mucosal turnover in the human gut. / Roager, Henrik Munch; Hansen, Lea Benedicte Skov; Bahl, Martin Iain; Frandsen, Henrik Lauritz; Carvalho, Vera; Gøbel, Rikke J.; Dalgaard, Marlene Danner; Sparholt, Morten; Vestergaard, Henrik; Hansen, Torben; Sicheritz-Ponten, Thomas; Nielsen, Henrik Bjørn; Pedersen, Oluf; Lauritzen, Lotte; Kristensen, Mette; Gupta, Ramneek; Licht, Tine Rask.

    2016. Abstract from 10th Joint Symposium INRA-Rowett 2016: Gut Microbiology, Clermont-Ferrand, France.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2016

  3. 2015
  4. Published

    A catalog of the mouse gut metagenome. / Xiao, Liang; Feng, Qiang; Liang, Suisha; Sonne, Si Brask; Xia, Zhongkui; Qiu, Xinmin; Li, Xiaoping; Long, Hua; Zhang, Jianfeng; Zhang, Dongya; Liu, Chuan; Fang, Zhiwei; Chou, Joyce; Glanville, Jacob; Hao, Qin; Kotowska, Dorota; Colding, Camilla; Licht, Tine Rask; Wu, Donghai; Yu, Jun; Sung, Joseph Jao Yiu; Liang, Qiaoyi; Li, Junhua; Jia, Huijue; Lan, Zhou; Tremaroli, Valentina; Dworzynski, Piotr; Nielsen, H Bjørn; Bäckhed, Fredrik; Doré, Joël; Le Chatelier, Emmanuelle; Ehrlich, S. Dusko; Lin, John C.; Arumugam, Manimozhiyan; Wang, Jun; Madsen, Lise; Kristiansen, Karsten.

    In: Nature Biotechnology, Vol. 33, No. 10, 2015, p. 1103-1108.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. Published

    A retrospective metagenomics approach to studying Blastocystis. / Andersen, Lee O'Brien; Bonde, Ida; Nielsen, Henrik Bjørn; Stensvold, Christen Rune.

    In: F E M S Microbiology Reviews, Vol. 91, No. 7, fiv072, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  6. Published

    Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota. / Forslund, Kristoffer; Hildebrand, Falk ; Nielsen, Trine N.; Falony, Gwen; Le Chatelier, Emmanuelle; Sunagawa, Shinichi; Prifti, Edi; Vieira-Silva, Sara ; Gudmundsdottir, Valborg; Pedersen, Helle Krogh; Arumugam, Manimozhiyan; Kristiansen, Karsten; Yvonne Voig, Anita; Vestergaard, Henrik; Hercog, Rajna; Costea, Paul Igor; Kultima, Jens Roat; Li, Junhua; Jørgensen, Torben; Levenez, Florence; Dore, Joël; Nielsen, Henrik Bjørn; Brunak, Søren; Raes, Jeroen; Hansen, Torben; Wang, Jun; Ehrlich, S. Dusko; Bork, Peer; Pedersen, Oluf.

    In: Nature, Vol. 528, No. 7581, 2015, p. 262-266.

    Publication: Research - peer-reviewLetter – Annual report year: 2015

  7. Published

    Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago. / Rasmussen, Simon; Allentoft, Morten Erik; Nielsen, Kasper; Orlando, Ludovic; Sikora, Martin; Sjögren, Karl-Göran; Pedersen, Anders Gorm; Schubert, Mikkel; Van Dam, Alex; Kapel, Christian Moliin Outzen; Nielsen, Henrik Bjørn; Brunak, Søren; Avetisyan, Pavel; Epimakhov, Andrey; Khalyapin, Mikhail Viktorovich; Gnuni, Artak; Kriiska, Aivar; Lasak, Irena; Metspalu, Mait; Moiseyev, Vyacheslav; Gromov, Andrei; Pokutta, Dalia; Saag, Lehti; Varul, Liivi; Yepiskoposyan, Levon; Sicheritz-Pontén, Thomas; Foley, Robert A; Lahr, Marta Mirazón; Nielsen, Rasmus; Kristiansen, Kristian; Willerslev, Eske.

    In: Cell, Vol. 163, No. 3, 2015, p. 571-582.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  8. Published

    Predicting facial characteristics from complex polygenic variations. / Fagertun, Jens; Wolffhechel, Karin Marie Brandt; Pers, Tune ; Nielsen, Henrik Bjørn; Gudbjartsson, Daniel ; Stefansson, Hreinn; Stefansson, Kari; Paulsen, Rasmus Reinhold; Jarmer, Hanne Østergaard.

    In: Forensic Science International: Genetics, Vol. 19, 2015, p. 263-268.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  9. 2014
  10. Published

    An integrated catalog of reference genes in the human gut microbiome. / Li, Junhua; Jia, Huijue; Cai, Xianghang; Zhong, Huanzi; Feng, Qiang; Sunagawa, Shinichi; Arumugam, Manimozhiyan; Kultima, Jens Roat; Prifti, Edi; Nielsen, Trine; Juncker, Agnieszka; Nielsen, Henrik Bjørn; Brunak, Søren.

    In: Nature Biotechnology, Vol. 32, No. 8, 2014, p. 834-841.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  11. Published

    Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes. / Nielsen, Henrik Bjørn; Almeida, Mathieu; Juncker, Agnieszka; Rasmussen, Simon; Li, Junhua; Sunagawa, Shinichi; Plichta, Damian Rafal; Gautier, Laurent; Pedersen, Anders Gorm; Emmanuelle, Le Chatelier; Pelletier, Eric; Bonde, Ida; Nielsen, Trine; Manichanh, Chaysavanh; Arumugam, Manimozhiyan; Batto, Jean-Michel; dos Santos, Marcelo Bertalan Quintanilha; Blom, Nikolaj; Borruel, Natalia; Burgdorf, Kristoffer S.; Boumezbeur, Fouad; Casellas, Francesc; Doré, Joël; Dworzynski, Piotr; Guarner, Francisco; Hansen, Torben; Hildebrand, Falk; Kaas, Rolf Sommer; Kennedy, Sean; Kristiansen, Karsten; Kultima, Jens Roat; Léonard, Pierre; Levenez, Florence; Lund, Ole; Moumen, Bouziane; Denis, Le Paslier; Pons, Nicolas; Pedersen, Oluf; Prifti, Edi; Qin, Junjie; Raes, Jeroen; Sørensen, Søren; Tap, Julien; Tims, Sebastian; Ussery, David; Yamada, Takuji; Renault, Pierre; Sicheritz-Pontén, Thomas; Bork, Peer; Wang, Jun; Brunak, Søren; Ehrlich, S. Dusko.

    In: Nature Biotechnology, Vol. 32, No. 8, 2014, p. 822-828.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  12. Published

    Metagenomic Systems Biology of the Human Microbiome. / Bonde, Ida; Nielsen, Henrik Bjørn (Supervisor); Sicheritz-Pontén, Thomas (Main supervisor).

    Technical University of Denmark, 2014. 153 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  13. 2013
  14. Published

    Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes. / Barah, Pankaj; Jayavelu, Naresh Doni; Rasmussen, Simon; Nielsen, Henrik Bjørn; Mundy, John; Bones, Atle M.

    In: BMC Genomics, Vol. 14, No. 1, 2013, p. 722.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

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