Frank Møller Aarestrup

  1. 2016
  2. Published

    A Livestock-Associated, Multidrug-Resistant, Methicillin-Resistant Staphylococcus aureus Clonal Complex 97 Lineage Spreading in Dairy Cattle and Pigs in Italy. / Feltrin, Fabiola; Alba, Patricia; Kraushaar, Britta; Ianzano, Angela; Argudíín, María Angeles; Di Matteo, Paola; Porrero, María Concepciión; Aarestrup, Frank Møller; Butaye, Patrick; Franco, Alessia; Battisti, Antonio.

    In: Applied and Environmental Microbiology, Vol. 82, No. 3, 2016, p. 816-821.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. Published

    Benchtop Whole-Genome Sequencing for Identification of Nosocomial Outbreaks in Tanzania. / Sonda, Tolbert; Kumburu, Happiness; Zwetselaar, Marco van; Ahrenfeldt, Johanne; Alifrangis, Michael; Lund, Ole; Kibiki, Gibson; Aarestrup, Frank Møller.

    In: Infection Control & Hospital Epidemiology, Vol. 37, No. 5, 2016, p. 622-623.

    Publication: Research - peer-reviewComment/debate – Annual report year: 2016

  4. Published
  5. Published

    Consolidating and Exploring Antibiotic Resistance Gene Data Resources. / Xavier, Basil Britto; Das, Anupam J.; Cochrane, Guy; De Ganck, Sandra; Kumar-Singh, Samir; Aarestrup, Frank Møller; Goossens, Herman; Malhotra-Kumar, Surbhi.

    In: Journal of Clinical Microbiology, Vol. 54, No. 4, 2016, p. 851-859.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  6. Published

    Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104. / Leekitcharoenphon, Pimlapas; Hendriksen, Rene S.; Le Hello, Simon; Weill, François-Xavier; Baggesen, Dorte Lau; Jun, Se-Ran; Ussery, David; Lund, Ole; Crook, Derrick W; Wilson, Daniel J; Aarestrup, Frank Møller.

    In: Applied and Environmental Microbiology, Vol. 82, No. 8, 2016, p. 2516-2526.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  7. 2015
  8. Published

    Audouin's gull, a potential vehicle of an extended spectrum beta-lactamase producing Salmonella Agona. / Antilles, Noelia; Garcia-Migura, Lourdes ; Joensen, Katrine Grimstrup; Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller; Cerda-Cuellar, Marta; Hendriksen, Rene S.

    In: FEMS MICROBIOLOGY LETTERS, Vol. 362, No. 3, 2015, p. 1-4.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  9. Published

    Biocide Susceptibility of Staphylococcus aureus CC398 and CC30 Isolates from Pigs and Identification of the Biocide Resistance Genes, qacG and qacC. / Seier-Petersen, Maria Amalie; Nielsen, Lene Nørby; Ingmer, Hanne; Aarestrup, Frank Møller; Agersø, Yvonne.

    In: Microbial Drug Resistance, Vol. 21, No. 5, 2015, p. 527-536.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  10. Published

    Comparative Evaluation of the Antimicrobial Activity of Different Antimicrobial Peptides against a Range of Pathogenic Bacteria. / Ebbensgaard, Anna Elisabeth; Mordhorst, Hanne; Overgaard, Michael Toft; Nielsen, Claus Gyrup; Aarestrup, Frank Møller; Hansen, Egon Bech; Mergaert, Peter (Editor).

    In: P L o S One, Vol. 10, No. 12, e0144611, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  11. Published
  12. Published

    Genome sequences of copper resistant and sensitive Enterococcus faecalis strains isolated from copper-fed pigs in Denmark. / Zhang, Siyu; Wang, Dan; Wang, Yihua; Hasman, Henrik; Aarestrup, Frank Møller; Alwathnani, Hend A; Zhu, Yong-Guan; Rensing, Christopher.

    In: Standards in Genomic Sciences, Vol. 10, No. 1, 35, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  13. Published

    Genomic Dissection of Travel-Associated Extended-Spectrum-Beta-Lactamase-Producing Salmonella enterica Serovar Typhi Isolates Originating from the Philippines: a One-Off Occurrence or a Threat to Effective Treatment of Typhoid Fever?. / Hendriksen, Rene S.; Leekitcharoenphon, Pimlapas; Mikoleit, Matthew; Jensen, Jacob Dyring; Kaas, Rolf Sommer; Roer, Louise; Joshi, Heena B.; Pornruangmong, Srirat; Pulsrikarn, Chaiwat; Gonzalez-Aviles, Gladys D.; Reuland, E. Ascelijn; Al Naiemi, Nashwan; Wester, Astrid Louise; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Journal of Clinical Microbiology, Vol. 53, No. 2, 2015, p. 677-680.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  14. Published

    Genomic Epidemiology. / Lund, Ole; Thomsen, Martin; Bellod Cisneros, Jose Luis; Ahrenfeldt, Johanne; Tetzschner, Anna Maria Malberg; Leekitcharoenphon, Shinny; Kaas, Rolf Sommer; Lukjancenko, Oksana; Aarestrup, Frank.

    Book of Abstracts. DTU's Sustain Conference 2015. Lyngby : Technical University of Denmark, 2015. Q-7.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  15. Published

    Genomic Signature of Multidrug-Resistant Salmonella enterica Serovar Typhi Isolates Related to a Massive Outbreak in Zambia between 2010 and 2012.. / Hendriksen, Rene S.; Leekitcharoenphon, Pimlapas; Lukjancenko, Oksana; Lukwesa-Musyani, Chileshe; Tambatamba, Bushimbwa; Mwaba, John; Kalonda, Annie; Nakazwe, Ruth; Kwenda, Geoffrey; Jensen, Jacob Dyring; Svendsen, Christina Aaby; Dittmann, Karen K.; Kaas, Rolf Sommer; Cavaco, Lina; Aarestrup, Frank Møller; Hasman, Henrik; Mwansa, James C. L.

    In: Journal of Clinical Microbiology, Vol. 53, No. 1, 2015, p. 262-272.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  16. Published

    Identification and Antimicrobial Resistance of Bacteria Isolated from Probiotic Products Used in Shrimp Culture. / Noor Uddin, Gazi Md; Larsen, Marianne Halberg; Christensen, Henrik; Aarestrup, Frank Møller; Phu, Tran Minh; Dalsgaard, Anders.

    In: P L o S One, Vol. 10, No. 7, e0132338, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  17. Published
  18. Published

    Livestock-Associated Methicillin Resistant and Methicillin Susceptible Staphylococcus aureus Sequence Type (CC)1 in European Farmed Animals: High Genetic Relatedness of Isolates from Italian Cattle Herds and Humans. / Alba, Patricia; Feltrin, Fabiola; Cordaro, Gessica; Concepcion Porrero, Maria; Kraushaar, Britta; Argudin, Maria Angeles; Nykasenoja, Suvi; Monaco, Monica; Stegger, Marc; Aarestrup, Frank Møller; Butaye, Patrick; Franco, Alessia; Battisti, Antonio; Cloeckaert, Axel (Editor).

    In: P L o S One, Vol. 10, No. 8, e0137143, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  19. Published
  20. Published

    Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data. / Joensen, Katrine Grimstrup; Tetzschner, Anna M. M.; Iguchi, Atsushi; Aarestrup, Frank Møller; Scheutz, Flemming.

    In: Journal of Clinical Microbiology, Vol. 53, No. 8, 2015, p. 2410-2426.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  21. Published
  22. Published
  23. Published

    Ringtest for identifikation og resistensbestemmelse af mastitispatogener 2014. / Cavaco, Lina; Lorenzen, Bjørn; Jensen, Jacob Dyring; Nielsen, Hanne Nørgaard; Butters, Jytte; Dahl Larsen, Heidi Kristina; Aarestrup, Frank Møller; Hendriksen, Rene S.

    Kgs. Lyngby : DTU Fødevareinstituttet, 2015. 14 p.

    Publication: ResearchReport – Annual report year: 2015

  24. Published

    The 16th EURL-AR Proficiency Test - Enterococci, Staphylococci and E. coli 2014. / Cavaco, Lina; Karlsmose Pedersen, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2015. 24 p.

    Publication: Research - peer-reviewReport – Annual report year: 2015

  25. Published

    The 17th EURL-AR Proficiency Test Salmonella, Campylobacter and genotypic characterisation 2014. / Karlsmose Pedersen, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2015. 18 p.

    Publication: Research - peer-reviewReport – Annual report year: 2015

  26. Published
  27. Published
  28. 2014
  29. Published
  30. Published

    Antimicrobial resistance of zoonotic and commensal bacteria in Europe: The missing link between consumption and resistance in veterinary medicine. / Garcia-Migura, Lourdes; Hendriksen, Rene S.; Fraile, Lorenzo; Aarestrup, Frank Møller.

    In: Veterinary Microbiology, Vol. 170, No. 1-2, 2014, p. 1-9.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  31. Published
  32. Published

    Characterization of Extended spectrum beta-lactamases (ESBL)-producing Escherichia coli obtained from Danish pigs, pig farmers and their families from farms with high or no consumption of 3rd or 4th generation cephalosporins. / Hammerum, Anette M.; Larsen, Jesper; Dalhoff Andersen, Vibe; Lester, Camilla H; Skytte, Timmy S. Skovgaard; Hansen, Frank ; Olsen, Stefan S.; Mordhorst, Hanne; Skov, Robert L.; Aarestrup, Frank Møller; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  33. Published

    Characterization of methicillin-resistant Staphylococcus aureus Sequence Type 398. / Christiansen, Mette Theilgaard; Aarestrup, Frank Møller (Main supervisor); Hasman, Henrik (Supervisor); Agersø, Yvonne (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2014. 204 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  34. Published

    Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis. / Seier-Petersen, Maria Amalie; Jasni, A.; Aarestrup, Frank Møller; Vigre, Håkan; Mullany, P.; Roberts, A. P.; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, Vol. 69, No. 2, 2014, p. 343-348.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  35. Published

    Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica. / Leekitcharoenphon, Pimlapas; Nielsen, Eva M.; Kaas, Rolf Sommer; Lund, Ole; Aarestrup, Frank Møller.

    In: P L o S One, Vol. 9, No. 2, e87991, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  36. Published
  37. Published

    Genome Sequences of Three Highly Copper-Resistant Salmonella enterica subsp. I Serovar Typhimurium Strains Isolated from Pigs in Denmark.. / Qin, Yanan; Hasman, Henrik; Aarestrup, Frank Møller; Alwathnani, Hend A.; Rensing, Christopher.

    In: Genome Announcements, Vol. 2, No. 6, e01334-14 , 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  38. Published

    Genome Sequences of Two Copper-Resistant Escherichia coli Strains Isolated from Copper-Fed Pigs.. / Lüthje, Freja L.; Hasman, Henrik; Aarestrup, Frank Møller; Alwathnani, Hend A.; Rensing, Christopher.

    In: Genome Announcements, Vol. 2, No. 6, e01341-14 , 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  39. Published
  40. Published

    In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing. / Carattoli, Alessandra; Zankari, Ea; García-Fernández, Aurora; Larsen, Mette Voldby; Lund, Ole; Villa, Laura; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Antimicrobial Agents and Chemotherapy, Vol. 58, No. 7, 2014, p. 3895-3903.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  41. Published
  42. Published
  43. Published
  44. Published

    Report of the 5th External Quality Assurance System on Identification and Typing of Methicillin resistant Staphylococcus aureus (MRSA), 2013. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 29 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  45. Published

    Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms. / Kaas, Rolf Sommer; Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller; Lund, Ole.

    In: PLOS ONE, Vol. 9, No. 8, e104984, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  46. Published

    Spatio-temporal analysis of Salmonella surveillance data in Thailand. / Coutinho Calado Domingues, Ana Rita; Vieira, Antonio; Hendriksen, Rene S.; Pulsrikarn, C.; Aarestrup, Frank Møller.

    In: Epidemiology and Infection, Vol. 142, No. 8, 2014, p. 1614-1624.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  47. Published

    The 14th EURL-AR Proficiency Test - enterococci, staphylococci and E. coli 2013. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    1 ed. Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 95 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  48. Published

    The 15th EURL-AR Proficiency Test Salmonella, Campylobacter and genotypic characterisation 2013. / Karlsmose, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    1 ed. Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 69 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  49. Published
  50. Published

    The External Quality Assurance System of the WHO Global Foodborne Infections Network: Year 2012. / Hendriksen, Rene S.; Karlsmose, Susanne; Jensen, Arne Bent; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2014. 27 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  51. Published

    The Role of the st313-td Gene in Virulence of Salmonella Typhimurium ST313. / Herrero-Fresno, Ana; Wallrodt, Inke; Leekitcharoenphon, Pimlapas; Olsen, John Elmerdahl; Aarestrup, Frank Møller; Hendriksen, Rene S.

    In: PLOS ONE, Vol. 9, No. 1, e84566, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  52. Published

    Whole Genome Epidemiological Typing of Escherichia coli. / Kaas, Rolf Sommer; Aarestrup, Frank Møller (Main supervisor); Ussery, David (Supervisor); Lund, Ole (Supervisor).

    Kgs. Lyngby : Technical University of Denmark, 2014. 126 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2015

  53. Published

    Whole Genome Epidemiological Typing of Salmonella. / Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller (Main supervisor); Lund, Ole (Supervisor); Ussery, David (Supervisor).

    National Food Institute, 2014. 112 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

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