Frank Møller Aarestrup

  1. 2015
  2. Published

    Genomic Dissection of Travel-Associated Extended-Spectrum-Beta-Lactamase-Producing Salmonella enterica Serovar Typhi Isolates Originating from the Philippines: a One-Off Occurrence or a Threat to Effective Treatment of Typhoid Fever?. / Hendriksen, Rene S.; Leekitcharoenphon, Pimlapas; Mikoleit, Matthew; Jensen, Jacob Dyring; Kaas, Rolf Sommer; Roer, Louise; Joshi, Heena B.; Pornruangmong, Srirat; Pulsrikarn, Chaiwat; Gonzalez-Aviles, Gladys D.; Reuland, E. Ascelijn; Al Naiemi, Nashwan; Wester, Astrid Louise; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Journal of Clinical Microbiology, Vol. 53, No. 2, 2015, p. 20677-680.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  3. Published

    Genomic Signature of Multidrug-Resistant Salmonella enterica Serovar Typhi Isolates Related to a Massive Outbreak in Zambia between 2010 and 2012.. / Hendriksen, Rene S.; Leekitcharoenphon, Pimlapas; Lukjancenko, Oksana; Lukwesa-Musyani, Chileshe; Tambatamba, Bushimbwa; Mwaba, John; Kalonda, Annie; Nakazwe, Ruth; Kwenda, Geoffrey; Jensen, Jacob Dyring; Svendsen, Christina Aaby; Dittmann, Karen K.; Kaas, Rolf Sommer; Cavaco, Lina; Aarestrup, Frank Møller; Hasman, Henrik; Mwansa, James C. L.

    In: Journal of Clinical Microbiology, Vol. 53, No. 1, 2015, p. 262-272.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  4. In press
  5. Published

    Ringtest for identifikation og resistensbestemmelse af mastitispatogener 2014. / Cavaco, Lina; Lorenzen, Bjørn; Jensen, Jacob Dyring; Nielsen, Hanne Nørgaard; Butters, Jytte; Dahl Larsen, Heidi Kristina; Aarestrup, Frank Møller; Hendriksen, Rene S.

    Kgs. Lyngby : DTU Fødevareinstituttet, 2015. 14 p.

    Publication: ResearchReport – Annual report year: 2015

  6. Published
  7. 2014
  8. Published
  9. Published

    Antimicrobial resistance of zoonotic and commensal bacteria in Europe: The missing link between consumption and resistance in veterinary medicine. / Garcia-Migura, Lourdes; Hendriksen, Rene S.; Fraile, Lorenzo; Aarestrup, Frank Møller.

    In: Veterinary Microbiology, Vol. 170, No. 1-2, 2014, p. 1-9.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  10. Published
  11. Published

    Characterization of Extended spectrum beta-lactamases (ESBL)-producing Escherichia coli obtained from Danish pigs, pig farmers and their families from farms with high or no consumption of 3rd or 4th generation cephalosporins. / Hammerum, Anette M.; Larsen, Jesper; Dalhoff Andersen, Vibe; Lester, Camilla H; Skytte, Timmy S. Skovgaard; Hansen, Frank ; Olsen, Stefan S.; Mordhorst, Hanne; Skov, Robert L.; Aarestrup, Frank Møller; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  12. Published

    Characterization of methicillin-resistant Staphylococcus aureus Sequence Type 398. / Christiansen, Mette Theilgaard; Aarestrup, Frank Møller (Main supervisor); Hasman, Henrik (Supervisor); Agersø, Yvonne (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2014. 204 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  13. Published

    Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis. / Seier-Petersen, Maria Amalie; Jasni, A.; Aarestrup, Frank Møller; Vigre, Håkan; Mullany, P.; Roberts, A. P.; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, Vol. 69, No. 2, 2014, p. 343-348.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  14. Published

    Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica. / Leekitcharoenphon, Pimlapas; Nielsen, Eva M.; Kaas, Rolf Sommer; Lund, Ole; Aarestrup, Frank Møller.

    In: P L o S One, Vol. 9, No. 2, e87991, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  15. Published
  16. Published

    Genome Sequences of Three Highly Copper-Resistant Salmonella enterica subsp. I Serovar Typhimurium Strains Isolated from Pigs in Denmark.. / Qin, Yanan; Hasman, Henrik; Aarestrup, Frank Møller; Alwathnani, Hend A.; Rensing, Christopher.

    In: Genome Announcements, Vol. 2, No. 6, e01334-14 , 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  17. Published

    Genome Sequences of Two Copper-Resistant Escherichia coli Strains Isolated from Copper-Fed Pigs.. / Lüthje, Freja L.; Hasman, Henrik; Aarestrup, Frank Møller; Alwathnani, Hend A.; Rensing, Christopher.

    In: Genome Announcements, Vol. 2, No. 6, e01341-14 , 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  18. Published
  19. Published

    In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing. / Carattoli, Alessandra; Zankari, Ea; García-Fernández, Aurora; Larsen, Mette Voldby; Lund, Ole; Villa, Laura; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Antimicrobial Agents and Chemotherapy, Vol. 58, No. 7, 2014, p. 3895-3903.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  20. Published
  21. Published
  22. Published
  23. Published

    Report of the 5th External Quality Assurance System on Identification and Typing of Methicillin resistant Staphylococcus aureus (MRSA), 2013. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 29 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  24. Published

    Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms. / Kaas, Rolf Sommer; Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller; Lund, Ole.

    In: PLOS ONE, Vol. 9, No. 8, e104984, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  25. Published

    Spatio-temporal analysis of Salmonella surveillance data in Thailand. / Coutinho Calado Domingues, Ana Rita; Vieira, Antonio; Hendriksen, Rene S.; Pulsrikarn, C.; Aarestrup, Frank Møller.

    In: Epidemiology and Infection, Vol. 142, No. 8, 2014, p. 1614-1624.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  26. Published

    The 14th EURL-AR Proficiency Test - enterococci, staphylococci and E. coli 2013. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    1 ed. Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 95 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  27. Published

    The 15th EURL-AR Proficiency Test Salmonella, Campylobacter and genotypic characterisation 2013. / Karlsmose, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    1 ed. Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 69 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  28. Published
  29. Published

    The External Quality Assurance System of the WHO Global Foodborne Infections Network: Year 2012. / Hendriksen, Rene S.; Karlsmose, Susanne; Jensen, Arne Bent; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2014. 27 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  30. Published

    The Role of the st313-td Gene in Virulence of Salmonella Typhimurium ST313. / Herrero-Fresno, Ana; Wallrodt, Inke; Leekitcharoenphon, Pimlapas; Olsen, John Elmerdahl; Aarestrup, Frank Møller; Hendriksen, Rene S.

    In: PLOS ONE, Vol. 9, No. 1, e84566, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  31. Published

    Whole Genome Epidemiological Typing of Salmonella. / Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller (Main supervisor); Lund, Ole (Supervisor); Ussery, David (Supervisor).

    National Food Institute, 2014. 112 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  32. 2013
  33. Published

    A Danish Salmonella Bareilly outbreak investigated by the use of whole genome sequencing. / Torpdahl, M.; Kiil, K.; Litrup, E.; Sørensen, Gitte; Aarestrup, Frank Møller.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 215.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  34. Published

    Animal and public health surveillance of infectious diseases. / Aarestrup, Frank Møller.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 13-14.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  35. Published
  36. Published

    Comparison of typing by whole genome sequencing (WGS) and pulsed field gel electrophoresis (PFGE) of isolates from a hospital outbreak with a CTX-M-15 producing Klebsiella pneumoniae. / Hansen, D. S.; Kaas, Rolf Sommer; Nielsen, E. M.; Aarestrup, Frank Møller; Hasman, Henrik.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 154.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  37. Published
  38. Published

    External quality assurance system (EQAS) for identification of mastitis pathogens in Denmark from 2006 to 2011. / Karlsmose, Susanne; Kunstmann, L.; Rundsten, Carsten Friis; Krogh, K.; Larsen, H.K.D.; Jensen, Arne Bent; Aarestrup, Frank Møller; Hendriksen, Rene S.

    In: Preventive Veterinary Medicine, Vol. 109, No. 3-4, 2013, p. 271-277.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  39. Published

    Extremely Drug-Resistant Salmonella enterica Serovar Senftenberg Infections in Patients in Zambia.. / Hendriksen, Rene S.; Joensen, Katrine Grimstrup; Lukwesa-Musyani, Chileshe; Kalondaa, Annie; Leekitcharoenphon, Pimlapas; Nakazwe, Ruth; Aarestrup, Frank Møller; Hasman, Henrik; Mwansa, James C L.

    In: Journal of Clinical Microbiology, Vol. 51, No. 1, 2013, p. 284-286.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  40. Published
  41. Published
  42. Published

    Livestock Origin for a Human Pandemic Clone of Community-Associated Methicillin-Resistant Staphylococcus aureus. / Spoor, Laura E.; McAdam, Paul R.; Weinert, Lucy A.; Rambaut, Andrew; Hasman, Henrik; Aarestrup, Frank Møller; Kearns, Angela M.; Larsen, Anders R.; Skov, Robert L.; Fitzgerald, J. Ross.

    In: mBio, Vol. 4, No. 4, e00356-13, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  43. Published

    PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data.. / Cosentino, Salvatore; Larsen, Mette Voldby; Aarestrup, Frank Møller; Lund, Ole.

    In: PloS one., Vol. 8, No. 10, 2013, p. e77302.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  44. Published

    Real-Time WGS-based Typing of VTEC Isolates for Surveillance and Outbreak Detection. / Joensen, Katrine Grimstrup; Hasman, Henrik; Scheutz, F.; Nielsen, E. M.; Lund, Ole; Aarestrup, Frank Møller.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 209.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  45. Published
  46. Published

    Resistance in bacteria of the food chain: epidemiology and control strategies. / Cavaco, Lina; Aarestrup, Frank Møller.

    Microbial Drug Resistance. Future Medicine Ltd, 2013. p. 134-156.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  47. Published

    Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock. / Price, Lance B.; Stegger, Marc; Hasman, Henrik; Aziz, Maliha; Larsen, Jesper; Andersen, Paal Skytt; Pearson, Talima; Waters, Andrew E.; Foster, Jeffrey T.; Schupp, James; Gillece, John; Driebe, Elizabeth; Liu, Cindy M.; Springer, Burkhard; Zdovc, Irena; Battisti, Antonio; Franco, Alessia; Żmudzki, Jacek; Schwarz, Stefan; Butaye, Patrick; Jouy, Eric; Pomba, Constanca; Porrero, M. Concepción; Ruimy, Raymond; Smith, Tara C.; Robinson, D. Ashley; Weese, J. Scott; Arriola, Carmen Sofia; Yu, Fangyou; Laurent, Frederic; Keim, Paul; Skov, Robert; Aarestrup, Frank Møller.

    In: mBio, Vol. 4, No. 1, 20e00520-12, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  48. Published

    The 12th EURL-AR Proficiency Test - enterococci, staphylococci and E. coli 2012. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Søborg : National Food Institute, Technical University of Denmark, 2013. 23 p.

    Publication: ResearchReport – Annual report year: 2013

  49. Published

    The 13th EURL-AR Proficiency Testing Salmonella, Campylobacter and genotypic characterization 2012. / Karlsmose, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Søborg : National Food Institute, Technical University of Denmark, 2013. 17 p.

    Publication: ResearchReport – Annual report year: 2013

  50. Published
  51. Published
  52. 2012
  53. Published

    Antimicrobial resistance in Salmonella spp. recovered from patients admitted to six different hospitals in Tehran, Iran from 2007 to 2008. / Tajbakhsh, Mercedeh ; Hendriksen, Rene S.; Nochi, Zahra ; Zali, Mohammad Reza ; Aarestrup, Frank Møller; Garcia-Migura, L. .

    In: Folia Microbiologica, Vol. 57, 2012, p. 91–97.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  54. Published

    Antimicrobial-resistant Shigella infections from Iran : an overlooked problem?. / Tajbakhsh, Mercedeh; García Migura, Lourdes; Rahbar, Mohammad; Svendsen, Christina Aaby; Mohammadzadeh, Mona; Zali, Mohammad Reza; Aarestrup, Frank M.; Hendriksen, Rene S.

    In: Journal of Antimicrobial Chemotherapy, Vol. 67, No. 5, 2012, p. 1128-1133.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

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