David Ussery
- 2016
- Published
Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104. / Leekitcharoenphon, Pimlapas; Hendriksen, Rene S.; Le Hello, Simon; Weill, François-Xavier; Baggesen, Dorte Lau; Jun, Se-Ran; Ussery, David; Lund, Ole; Crook, Derrick W; Wilson, Daniel J; Aarestrup, Frank Møller.
In: Applied and Environmental Microbiology, Vol. 82, No. 8, 2016, p. 2516-2526.Publication: Research - peer-review › Journal article – Annual report year: 2016
- 2015
- Published
Ebolavirus comparative genomics. / Jun, Se-Ran; Leuze, Michael R.; Nookaew, Intawat; Uberbacher, Edward C.; Land, Miriam; Zhang, Qian; Wanchai, Visanu; Chai, Juanjuan; Nielsen, Morten; Trolle, Thomas; Lund, Ole; Buzard, Gregory S.; Pedersen, Thomas Dybdal; Wassenaar, Trudy M.; Ussery, David W.
In: F E M S Microbiology Reviews, Vol. 479, No. 1, fuv031, 2015, p. 764-778.Publication: Research - peer-review › Journal article – Annual report year: 2015
- Published
Insights from 20 years of bacterial genome sequencing. / Land, Miriam; Hauser, Loren; Jun, Se-Ran; Nookaew, Intawat; Leuze, Michael R.; Ahn, Tae-Hyuk; Karpinets, Tatiana; Lund, Ole; Kora, Guruprased; Wassenaar, Trudy; Poudel, Suresh; Ussery, David.
In: Functional & Integrative Genomics, Vol. 15, No. 2, 2015, p. 141-161.Publication: Research - peer-review › Journal article – Annual report year: 2015
- Published
Molecular Analysis of Asymptomatic Bacteriuria Escherichia coli Strain VR50 Reveals Adaptation to the Urinary Tract by Gene Acquisition. / Beatson, Scott A.; Ben Zakour, Nouri L.; Totsika, Makrina; Forde, Brian M.; Watts, Rebecca E.; Mabbett, Amanda N.; Szubert, Jan M.; Sarkar, Sohinee; Phan, Minh-Duy; Peters, Kate M.; Petty, Nicola K.; Alikhan, Nabil-Fareed; Sullivan, Mitchell J.; Gawthorne, Jayde A.; Stanton-Cook, Mitchell; Nhu, Nguyen Thi Khanh; Chong, Teik Min; Yin, Wai-Fong; Chan, Kok-Gan; Hancock, Viktoria ; Ussery, David W.; Ulett, Glen C.; Schembri, Mark A.
In: Infection and Immunity, Vol. 83, No. 5, 2015, p. 1749-1764.Publication: Research - peer-review › Journal article – Annual report year: 2015
- Published
Pan-Genome Analysis of Human Gastric Pathogen H. pylori: Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of Potential Core Therapeutic Targets. / Ali, Amjad; Naz, Anam; Soares, Siomar C.; Bakhtiar, Marriam; Tiwari, Sandeep; Hassan, Syed S.; Hanan, Fazal; Ramos, Rommel; Pereira, Ulisses; Barh, Debmalya; Pereira Figueiredo, Henrique Cesar; Ussery, David; Miyoshi, Anderson; Silva, Artur; Azevedo, Vasco.
In: Journal of Biomedicine and Biotechnology, Vol. 2015, 139580, 2015.Publication: Research - peer-review › Journal article – Annual report year: 2015
- Published
Review and phylogenetic analysis of qac genes that reduce susceptibility to quaternary ammonium compounds in Staphylococcus species. / Wassenaar, Trudy M; Ussery, David; Nielsen, Lene Nørby; Ingmer, Hanne.
In: European Journal of Microbiology and Immunology (Print), Vol. 5, No. 1, 2015, p. 44-61.Publication: Research - peer-review › Review – Annual report year: 2016
- Published
Unique and conserved genome regions in Vibrio harveyi and related species in comparison with the shrimp pathogen Vibrio harveyi CAIM 1792. / Valles, Iliana Espinoza; Vora, Gary J; Lin, Baochuan; Leekitcharoenphon, Pimlapas; González-Castillo, Adrián; Ussery, David; Høj, Lone; Gomez-Gil, Bruno.
In: Microbiology, Vol. 161, No. 9, 2015, p. 1762-1779.Publication: Research - peer-review › Journal article – Annual report year: 2015
- 2014
- Published
Analysis of pan-genome content and its application in microbial identification. / Lukjancenko, Oksana; Ussery, David (Main supervisor); Larsen, Mette Voldby (Supervisor).
Technical University of Denmark, 2014. 177 p.Publication: Research › Ph.D. thesis – Annual report year: 2014
- Published
Benchmarking of methods for genomic taxonomy. / Larsen, Mette Voldby; Cosentino, Salvatore; Lukjancenko, Oksana; Saputra, Dhany; Rasmussen, Simon; Hasman, Henrik; Sicheritz-Pontén, Thomas; Aarestrup, Frank Møller; Ussery, David; Lund, Ole.
In: Journal of Clinical Microbiology, Vol. 52, No. 5, 2014, p. 1529-1539.Publication: Research - peer-review › Journal article – Annual report year: 2014
- Published
Determining and comparing protein function in Bacterial genome sequences. / Vesth, Tammi Camilla; Ussery, David (Main supervisor); Lagesen, Karin (Supervisor).
Technical University of Denmark, 2014. 101 p.Publication: Research › Ph.D. thesis – Annual report year: 2014