Stochastic Systems and Signals

  1. 2015
  2. Published

    Concentrating Genomic Length DNA in a Microfabricated Array. / Chen, Yu ; Abrams, Ezra S. ; Boles, T. Christian ; Pedersen, Jonas Nyvold; Flyvbjerg, Henrik; Austin, Robert H.; Sturm, James C. .

    In: Physical Review Letters, Vol. 114, No. 19, 198303, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  3. Published

    Estimation of motility parameters from trajectory data : A condensate of our recent results. / Vestergaard, Christian L.; Pedersen, Jonas Nyvold; Mortensen, Kim I.; Flyvbjerg, Henrik.

    In: European Physical Journal. Special Topics, Vol. 224, No. 7, 2015, p. 1151-1168.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  4. Published

    Optical mapping of single-molecule human DNA in disposable, mass-produced all-polymer. / Østergaard, Peter Friis; Lopacinska-Jørgensen, Joanna; Pedersen, Jonas Nyvold; Tommerup, Niels; Kristensen, Anders; Flyvbjerg, Henrik; Silahtaroglu, Asli; Marie, Rodolphe ; Taboryski, Rafael J.

    In: Journal of Micromechanics and Microengineering, Vol. 25, 2015, p. 105002.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. Published
  6. 2014
  7. Published

    Harmonic Force Spectroscopy Reveals a Force-Velocity Curve from a Single Human Beta Cardiac Myosin Motor. / Sung, Jongmin; Nag, Suman; Vestergaard, Christian L.; Mortensen, Kim; Flyvbjerg, Henrik; Spudich, James.

    In: BIOPHYSICAL JOURNAL, Vol. 106, No. 2, 2014, p. 453A.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2014

  8. Published

    How to get into that "room at the bottom".. / Flyvbjerg, Henrik.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 111, No. 37, 2014, p. 13249-13250.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  9. Published

    Nanofluidics to Enhance Single Molecule DNA Imaging : Detecting Genomic Structural Variation in Humans. / Bauer, David L. V.; Marie, Rodolphe ; Pedersen, Jonas Nyvold; Rasmussen, Kristian Hagsted; Yusuf, Mohammed; Volpi, Emanuela; Flyvbjerg, Henrik; Kristensen, Anders; Mir, Kalim U.

    In: BIOPHYSICAL JOURNAL, Vol. 106, No. 2, 2014, p. 395A.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2014

  10. Published

    Optimal estimation of diffusion coefficients from single-particle trajectories. / Vestergaard, Christian L.; Blainey, Paul C.; Flyvbjerg, Henrik.

    In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics, Vol. 89, No. 2, 2014, p. 022726.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  11. Published
  12. 2013
  13. Published

    A diagrammatic description of the equations of motion, current and noise within the second-order von Neumann approach. / Karlstrom, O.; Emary, C. ; Zedler, P.; Pedersen, Jonas Nyvold; Bergenfeldt, C.; Samuelsson, P.; Brandes, T. ; Wacker, A.

    In: Journal of Physics A: Mathematical and Theoretical, Vol. 46, No. 6, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  14. Published

    A nanofluidic device for mapping single DNA molecules to the human genome. / Marie, Rodolphe ; Pedersen, Jonas Nyvold; L. Bauer, David; Rasmussen, Kristian Hagsted; Yusuf, Mohamed; Volpi, Emanuela; U Mir, Kalim; Flyvbjerg, Henrik; Kristensen, Anders.

    Proceedings of the 39th International Conference on Micro and Nano Engineering. 2013.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2014

  15. Published

    Calibration on the Spot of EMCCD Cameras for Super Resolution Microscopy. / Mortensen, Kim; Flyvbjerg, Henrik.

    In: BIOPHYSICAL JOURNAL, Vol. 104, No. 2; SUPP/1, 2013, p. 668a.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2013

  16. Published

    Caulobacter chromosome in vivo configuration matches model predictions for a supercoiled polymer in a cell-like confinement. / Hong, Sun-Hae; Toro, Esteban; Mortensen, Kim; de la Rosa, Mario A. Díaz; Doniach, Sebastian; Shapiro, Lucy; Spakowitz, Andrew J.; McAdams, Harley H.

    In: National Academy of Sciences. Proceedings, Vol. 110, No. 5, 2013, p. 1674-1679.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  17. Published

    Fully Streched Single DNA Molecules in a Nanofluidic Chip Show Large-Scale Structural Variation. / Pedersen, Jonas Nyvold; Marie, Rodolphe ; Bauer, D. L.; Rasmussen, Kristian Hagsted; Yusuf, Mohamed Adan; Volpi, E. V.; Kristensen, Anders; Mir, K. U.; Flyvbjerg, Henrik.

    In: Biophysical Journal, Vol. 104, No. 2; SUPP/1, 2013, p. 175a.

    Publication: Research - peer-reviewComment/debate – Annual report year: 2013

  18. Published

    Integrated view of genome structure and sequence of a single DNA molecule in a nanofluidic device. / Marie, Rodolphe ; Pedersen, Jonas Nyvold; L. V. Bauer, David ; Rasmussen, Kristian Hagsted; Yusuf, Mohammed; Volpi, Emanuela ; Flyvbjerg, Henrik; Kristensen, Anders; U. Mirb, Kalim.

    In: National Academy of Sciences. Proceedings, Vol. 110, No. 13, 2013, p. 4893-4898.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  19. Published

    Visualizing structural variations of single DNA molecules in a nanofluidic device. / Marie, Rodolphe ; Pedersen, Jonas Nyvold; Bauer, David L.V.; Rasmussen, Kristian Hagsted; Yusuf, Mohamed; Volpi, Emanuela; U Mir, Kalim; Flyvbjerg, Henrik; Kristensen, Anders.

    2013. Abstract from DNA in nanotechnology, Gothenburg, Sweden.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2014

  20. 2012
  21. Published

    Assessment of Automated Analyses of Cell Migration on Flat and Nanostructured Surfaces. / Gradinaru, Cristian; Lopacinska, Joanna M.; Huth, Johannes; Kestler, Hans A. ; Flyvbjerg, Henrik; Mølhave, Kristian.

    In: Computational and Structural Biotechnology Journal, Vol. 1, No. 2, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  22. Published
  23. Published

    DNA confinement in nanochannels: physics and biological applications. / Reisner, Walter ; Pedersen, Jonas Nyvold; Austin, Robert H .

    In: Reports on Progress in Physics, Vol. 75, No. 10, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  24. Published
  25. Published

    Markers of primary graft dysfunction. / Hagedorn, Peter (Inventor); Flyvbjerg, Henrik (Inventor); Sahar, Elhanan (Inventor); Iversen, Martin (Inventor); Burton, Christopher M. (Inventor); Cohen, Irun R. (Inventor); Domany, Eytan (Inventor).

    IPC No.: G01N33/53. Patent No.: WO2012052994. Apr 26, 2012.

    Publication: ResearchPatent – Annual report year: 2012

  26. Published

    Modeling hysteresis observed in the human erythrocyte voltage-dependent cation channel. / Flyvbjerg, Henrik; Gudowska-Nowak, Ewa; Christophersen, Palle; Bennekou, Poul.

    In: Acta Physica Polonica. Series B: Elementary Particle Physics, Nuclear Physics, Statistical Physics, Theory of Relativity, Field Theory, Vol. 43, No. 11, 2012, p. 2117-2140.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  27. Published
  28. 2010
  29. Published
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