Section for Virology

  1. 2016
  2. Published

    A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome. / Hagberg, Emma Elisabeth; Krarup, Anders; Fahnøe, Ulrik; Larsen, Lars Erik; Dam-Tuxen, Rebekka; Pedersen, Anders Gorm.

    In: Journal of Virological Methods, Vol. 234, 2016, p. 43-51.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. Published

    A novel multiplex RT-qPCR method based on dual-labelled probes suitable for typing all known genotypes of viral haemorrhagic septicaemia virus. / Vázquez, D.; López-Vázquez, C.; Skall, Helle Frank; Mikkelsen, Susie Sommer; Olesen, Niels Jørgen; Dopazo, C P.

    In: Journal of Fish Diseases, Vol. 39, No. 4, 2016, p. 467-482.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  4. Published

    Assessing the potential spread and maintenance of foot-and-mouth disease virus infection in wild ungulates: general principles and application to a specific scenario in Thrace. / Dhollander, S.; Belsham, Graham; Lange, M.; Willgert, K.; Alexandrov, T.; Chondrokouki, E.; Depner, K.; Khomenko, S.; Özyörük, F.; Salman, M.; Thulke, H.-H.; Bøtner, Anette.

    In: Transboundary and Emerging Diseases, Vol. 63, No. 2, 2016, p. 165–174.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  5. Published

    Experimental Treatment of Ebola Virus Disease with TKM-130803: A Single-Arm Phase 2 Clinical Trial. / Dunning, Jake; Sahr, Foday; Rojek, Amanda; Gannon, Fiona; Carson, Gail; Idriss, Baimba; Massaquoi, Thomas; Gandi, Regina; Joseph, Sebatu; Osman, Hassan K.; Brooks, Timothy J. G.; Simpson, Andrew J. H.; Goodfellow, Ian; Thorne, Lucy; Arias, Armando; Merson, Laura; Castle, Lyndsey; Howell-Jones, Rebecca; Pardinaz-Solis, Raul; Hope-Gill, Benjamin; Ferri, Mauricio; Grove, Jennifer; Kowalski, Mark; Stepniewska, Kasia; Lang, Trudie; Whitehead, John; Olliaro, Piero; Samai, Mohammed; Horby, Peter W.; von Seidlein, Lorenz (Editor).

    In: P L o S Medicine, Vol. 13, No. 4, e1001997, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  6. E-pub ahead of print

    First evidence of infectious hematopoietic necrosis virus (IHNV) in the Netherlands. / Haenen, O L M; Schuetze, H; Cieslak, M; Oldenburg, S; Spierenburg, M A H; Roozenburg-Hengst, I; Voorbergen-Laarman, M; Engelsma, M Y; Olesen, Niels Jørgen.

    In: Journal of Fish Diseases, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  7. Published

    Fish health in Mediterranean Aquaculture, past mistakes and future challenges. / Vendramin, Niccolò; Zrncic, S.; Padros, F.; Oraic, D.; Le Breton, A.; Zarza, C.; Olesen, Niels Jørgen.

    In: Bulletin of the European Association of Fish Pathologists, Vol. 36, No. 1, 2016, p. 38-45.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  8. Published

    Forbedret diagnostik af mink enteritis virus (MEV). / Kvisgaard, Lise Kirstine; Holm, Elisabeth; Chriél, Mariann; Larsen, Lars Erik; Hjulsager, Charlotte Kristiane.

    Faglig årsberetning 2015: Kopenhagen Fur. Aarhus N : Kopenhagen Fur, 2016. p. 101-104.

    Publication: ResearchReport chapter – Annual report year: 2016

  9. Published

    Generation and transcriptional programming of intestinal dendritic cells: essential role of retinoic acid. / Zeng, R.; Bscheider, M; Lahl, Katharina; Lee, M; Butcher, E C.

    In: Mucosal Immunology, Vol. 9, 2016, p. 183-193.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  10. Published

    Immunity raised by recent European subtype 1 PRRSV strains allows better replication of East European subtype 3 PRRSV strain Lena than that raised by an older strain. / Trus, Ivan; Frydas, Ilias S.; Reddy, Vishwanatha R. A. P.; Bonckaert, Caroline; Li, Yewei; Kvisgaard, Lise Kirstine; Larsen, Lars Erik; Nauwynck, Hans J.

    In: Veterinary Research, Vol. 47, No. 1, 15, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  11. Published

    Molecular tracing of viral diseases in aquaculture. / Mikkelsen, Susie Sommer; Bigarre, L.; Jensen, B. Bang; Kristoffersen, A. B.; Jansen, P. A.; Panzarin, V.; Bayliss, S. C.; Avarre, J. C.; Olesen, Niels Jørgen.

    In: Bulletin of the European Association of Fish Pathologists, Vol. 36, No. 1, 2016, p. 46-51.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  12. Published

    Overførsel af Aleutian Mink Disease Virus med lopper. / Hartby, Christina Marie; Hammer Jensen, Trine ; Søholt Larsen, Kim; Hansen, Mette Sif; Chriél, Mariann; Larsen, Lars Erik; Struve, Tina; Hjulsager, Charlotte Kristiane.

    Faglig årsberetning 2015: Kopenhagen Fur. Aarhus N : Kopenhagen Fur, 2016. p. 91-94.

    Publication: ResearchReport chapter – Annual report year: 2016

  13. Published

    Recommended reporting standards for test accuracy studies of infectious diseases of finfish, amphibians, molluscs and crustaceans: the STRADAS-aquatic checklist. / Gardner, Ian A.; Whittington, Richard J.; Caraguel, Charles G. B.; Hick, Paul; Moody, Nicholas J. G.; Corbeil, Serge; Garver, Kyle A.; Warg, Janet V.; Arzul, Isabelle; Purcell, Maureen K.; Crane, Mark St J.; Waltzek, Thomas B.; Olesen, Niels Jørgen; Gallardo Lagno, Alicia.

    In: Diseases of Aquatic Organisms, Vol. 118, No. 2, 2016, p. 91-111.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  14. Published

    Sublethal concentrations of ichthyotoxic alga Prymnesium parvum affect rainbow trout susceptibility to viral haemorrhagic septicaemia virus. / Andersen, Nikolaj Gedsted; Lorenzen, Ellen; Boutrup, Torsten Snogdal; Hansen, Per Juel; Lorenzen, Niels.

    In: Diseases of Aquatic Organisms, Vol. 117, No. 3, 2016, p. 187-195.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  15. Published

    Subtypning af influenza på danske minkfarme i 2014. / Hjulsager, Charlotte Kristiane; Krog, Jesper Schak; Chriél, Mariann; Larsen, Gitte; Larsen, Lars Erik.

    Faglig årsberetning 2015: Kopenhagen Fur. Aarhus N : Kopenhagen Fur, 2016. p. 109-113.

    Publication: ResearchReport chapter – Annual report year: 2016

  16. E-pub ahead of print

    The future of antiviral immunotoxins. / Spiess, K.; Høy Jakobsen, Mette; Kledal, Thomas N; Rosenkilde, Mette M.

    In: Journal of Leukocyte Biology, 2016.

    Publication: Research - peer-reviewReview – Annual report year: 2016

  17. Published

    The Non-structural Protein 5 and Matrix Protein Are Antigenic Targets of T Cell Immunity to Genotype 1 Porcine Reproductive and Respiratory Syndrome Viruses. / Mokhtar, Helen; Pedrera, Miriam; Frossard, Jean-Pierre; Biffar, Lucia; Hammer, Sabine E.; Kvisgaard, Lise Kirstine; Larsen, Lars Erik; Stewart, Graham R.; Somavarapu, Satyanarayana; Steinbach, Falko; Graham, Simon P.

    In: Frontiers in Immunology, Vol. 7, 40, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  18. Published

    Unrecognized circulation of SAT 1 foot-and-mouth disease virus in cattle herds around Queen Elizabeth National Park in Uganda. / Dhikusooka, Moses Tefula; Ayebazibwe, Chrisostom; Namatovu, Alice; Belsham, Graham; Siegismund, Hans Redlef; Wekesa, Sabenzia Nabalayo; Balinda, Sheila Nina; Muwanika, Vincent B; Tjørnehøj, Kirsten.

    In: B M C Veterinary Research, Vol. 12, No. 1, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  19. Published

    Virulence of viral haemorrhagic septicaemia virus (VHSV) genotype III in rainbow trout. / Ito, Takafumi; Kurita, Jun; Mori, Koh-Ichiro; Olesen, Niels Jørgen.

    In: Veterinary Research, Vol. 47, No. 1, 4, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  20. 2015
  21. Published

    A cell culture-adapted Classical swine fever virus phenotype does not require the 476Arg Erns mutation. / Drager, Carolin; Blome, Sandra; Beer, Martin; Reimann, Ilona; Rasmussen, Thomas Bruun.

    Xth International Congress for Veterinary Virology: Abstract Book. Montpellier, France, 2015. p. 137-137.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  22. Published

    Analysis of Recent Serotype O Foot‐and‐Mouth Disease Viruses from Livestock in Kenya: Evidence of Four Independently Evolving Lineages. / Wekesa, S. N.; Muwanika, V. B.; Siegismund, H. R.; Sangula, A. K.; Namatovu, A.; Dhikusooka, M. T.; Tjørnehøj, Kirsten; Balinda, S. N.; Wadsworth, J.; Knowles, N. J.; Belsham, Graham.

    In: Transboundary and Emerging Diseases, Vol. 62, No. 3, 2015, p. 305-314.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  23. Published

    Application of qPCR assays for diagnosing causes of viral mink diarrhea. Preliminary results. / Hartby, Christina Marie; Kvisgaard, Lise Kirstine; Larsen, Lars Erik; Chriél, Mariann; Hjulsager, Charlotte Kristiane.

    2015. Abstract from Nordic Association of Agricultural Scientists, Turku, Finland.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  24. Published

    Bat Coronaviruses circulating in Danish bats. / Rasmussen, Thomas Bruun; Chriél, Mariann; Baagøe, Hans J.; Fjederholt, Esben; Kooi, Engbert A.; Belsham, Graham; Bøtner, Anette.

    Xth International Congress for Veterinary Virology. Montepiller, France, 2015. p. 252-252.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  25. Published

    Bat Coronaviruses circulating in Danish bats. / Rasmussen, Thomas Bruun; Chriél, Mariann; Baagøe, Hans J.; Fjederholt, Esben; Kooi, Engbert A.; Belsham, Graham; Bøtner, Anette.

    2015. Poster session presented at 10th International Congress for Veterinary Virology , Montpellier, France.

    Publication: Research - peer-reviewPoster – Annual report year: 2015

  26. Published

    Beskytter de eksisterende vacciner godt nok mod PCV2-mutant (PCV2d)?. / Larsen, Lars Erik; Krog, Jesper Schak; Hjulsager, Charlotte Kristiane.

    In: Dansk Veterinaertidsskrift, No. 13, 2015, p. 48-48.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  27. Published

    Bioinformatics prediction of swine MHC class I epitopes from Porcine Reproductive and Respiratory Syndrome Virus. / Welner, Simon; Nielsen, Morten; Lund, Ole; Jungersen, Gregers; Larsen, Lars Erik.

    2015. Abstract from Keystone Symposia on Molecular and Cellular Biology: Accelerating life science discovery, Keystone, United States.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  28. Published

    Challenges for Serology-Based Characterization of Foot-and-Mouth Disease Outbreaks in Endemic Areas; Identification of Two Separate Lineages of Serotype O FMDV in Uganda in 2011. / Namatovu, A.; Belsham, Graham; Ayebazibwe, C.; Dhikusooka, M. T.; Wekesa, S. N.; Siegismund, H. R.; Muwanika, V. B.; Tjørnehøj, Kirsten.

    In: Transboundary and Emerging Diseases, Vol. 62, No. 5, 2015, p. 522-534.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  29. Published

    Characterisation of recent foot-and-mouth disease viruses from African buffalo ( Syncerus caffer )and cattle in Kenya is consistent with independent virus populations. / Nabalayo Wekesa, Sabenzia; Kiprotich Sangula, Abraham; Belsham, Graham; Tjørnehøj, Kirsten; Muwanika, Vincent B.; Gakuya, Francis; Mijele, Dominic; Redlef Siegismund, Hans.

    In: B M C Veterinary Research, Vol. 11, No. 17, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  30. Published

    Characterization of eelpout rhabdovirus (ERV) on cell culture. / Blomkvist, E.; Alfjorden, A.; Hakhverdyan, Mikhayil; Boutrup, Torsten Snogdal; Ahola, H.; Ljunghager, F.; Hagström, Å.; Olesen, Niels Jørgen; Juremalm, M.; Leijon, M.; Valarcher, J.-F.; Axen, C.

    17th International Conference on Diseases of Fish And Shellfish: Abstract book. Las Palmas : European Association of Fish Pathologists, 2015. p. 228-228 P-004.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  31. Published

    Characterization of foot-and-mouth disease viruses from Ugandan cattle outbreaks during 2012-2013: Evidence for circulation of multiple serotypes.. / Namatovu, Alice; Tjørnehøj, Kirsten; Belsham, Graham; Dhikusooka, Moses T.; Wekesa, Sabenzia Nabalayo; Muwanika, Vincent B.; Siegismund, Hans R.; Ayebazibwe, Chrisostom.

    In: P L o S One, Vol. 10, No. 2, e011481, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  32. Published

    Characterization of the PRRSV strain circulating in a PRRSV type 1 positive herd before, during and after vaccination with a PRRSV type 1 vaccine. / Kvisgaard, Lise Kirstine; Kristensen, Charlotte Sonne; Hjulsager, Charlotte Kristiane; Larsen, Lars Erik.

    2015. Abstract from 7th International Symposium on Emerging and Re-emerging Pig Diseases, Kyoto, Japan.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  33. Published

    Characterizing novel endogenous retroviruses from genetic variation inferred from short sequence reads. / Mourier, Tobias; Mollerup, Sarah; Vinner, Lasse; Kjartansdóttir, Kristín Rós; Guldberg Frøslev, Tobias; Boutrup, Torsten Snogdal; Nielsen, Lars Peter; Willerslev, Eske; Hansen, Anders J.

    In: Scientific Reports, Vol. 5, 15644, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  34. Published

    Complete genome sequence of eelpout rhabdovirus (ERV) identified by deep sequencing of viral RNA. / Hakhverdyan, Mikhayil; Areskog, M.; Blomkvist, E.; Alfjorden, A.; Boutrup, Torsten Snogdal; Ahola, H.; Ljunghager, F.; Hagström, Å.; Olesen, Niels Jørgen; Juremalm, M.; Valarcher, J.-F.; Axen, C.; Leijon, M.

    17th International Conference on Diseases of Fish And Shellfish: Abstract book. Las Palmas : European Association of Fish Pathologists, 2015. p. 341-341 P-117.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  35. Published

    Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction. / Fahnøe, Ulrik; Pedersen, Anders Gorm; Dräger, Carolin; Orton, Richard J; Blome, Sandra; Höper, Dirk; Beer, Martin; Rasmussen, Thomas Bruun.

    In: P L o S One, Vol. 10, No. 10, e0140912, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  36. Published

    Danske PPV-stammer har ændret sig genetisk. / Hjulsager, Charlotte Kristiane; Krog, Jesper Schak; Larsen, Lars Erik.

    In: Dansk Veterinaertidsskrift, No. 15, 2015, p. 47-47.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  37. Published

    Detection of African Swine Fever Virus DNA in Blood Samples Stored on FTA Cards from Asymptomatic Pigs in Mbeya Region, Tanzania. / Braae, U. C.; Johansen, M. V.; Ngowi, H. A.; Rasmussen, Thomas Bruun; Nielsen, Jens; Uttenthal, Åse.

    In: Transboundary and Emerging Diseases, Vol. 62, No. 1, 2015, p. 87–90.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  38. Published

    Detection of American lineage low pathogenic avian influenza viruses in Uria lomvia in Greenland. / Hjulsager, Charlotte Kristiane; Hartby, Christina Marie; Krog, Jesper Schak; Holm, Elisabeth; Larsen, Lars Erik.

    2015. Abstract from 9th International Symposium on Avian Influenza, Athens, Georgia, United States.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  39. Published

    Detection of antibodies specific to koi herpesvirus (KHV) by serum neutralization test. / Cabon, J.; Louboutin, L.; Castric, J.; Bergmann, S. M.; Bovo, G.; Matras, M.; Haenen, O.; Olesen, Niels Jørgen; Morin, T.

    17th International Conference on Diseases of Fish And Shellfish: Abstract book. Las Palmas : European Association of Fish Pathologists, 2015. p. 115-115 O-107.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  40. Published

    Detection of PRRSV in air sampled inside and outside PRRSV-positive herds in Denmark. / Priebe, A.; Kvisgaard, Lise Kirstine; Rathkjen, P. H.; Hjulsager, Charlotte Kristiane; Havn, K.; Larsen, Lars Erik.

    2015. Abstract from International Porcine Reproductive And Respiratory Syndrome Congress, Ghent, Belgium.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  41. Published

    Development and Characterization of Probe-Based Real Time Quantitative RT-PCR Assays for Detection and Serotyping of Foot-And-Mouth Disease Viruses Circulating in West Eurasia.. / Jamal, Syed M.; Belsham, Graham.

    In: P L o S One, Vol. 10, No. 8, e0135559, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  42. Published

    Development of a real-time RT-PCR assay that detects a broad range of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Type 1 subtypes. / Kvisgaard, Lise Kirstine; Hjulsager, Charlotte Kristiane; Botti, S.; Larsen, Lars Erik.

    2015. Abstract from International Porcine Reproductive And Respiratory Syndrome Congress, Ghent, Belgium.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  43. Published

    Different clinical, virological, serological and tissue tropism outcomes of two new and one old Belgian type 1 subtype 1 porcine reproductive and respiratory virus (PRRSV) isolates. / Frydas, Ilias S.; Trus, Ivan; Kvisgaard, Lise Kirstine; Bonckaert, Caroline; Reddy, Vishwanatha R. A. P.; Li, Yewei; Larsen, Lars Erik; Nauwynck, Hans J.

    In: Veterinary Research, Vol. 46, 37, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  44. Published

    Disease management mitigates risk of pathogen transmission from farmed salmon. / Jones, S. R. M.; Bruno, D. W.; Madsen, Lone; Peeler, E. J.

    17th International Conference on Diseases of Fish And Shellfish: Abstract book. Las Palmas : European Association of Fish Pathologists, 2015. p. 50-50 O-042.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  45. Published

    Elucidating the T-cell reactivity against porcine IDO and RhoC to establish the pig as an animal model for vaccine development against human cancer. / Overgaard, Nana Haahr; Frøsig, Thomas Mørch; Welner, Simon; Rasmussen, Michael; Ilsøe, Mette; Sørensen, Maria Rathmann; Andersen, Mads Hald; Buus, Søren; Jungersen, Gregers.

    2015. Abstract from 13th Annual meeting in the Association for Cancer Immunutherapy, Mainz, Germany.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2015

  46. Published

    Establishing the pig as a large animal model for vaccine development against human cancer. / Overgaard, Nana Haahr; Frøsig, Thomas Mørch; Welner, Simon; Rasmussen, Michael; Ilsøe, Mette; Sørensen, Maria Rathmann; Andersen, Mads Hald; Buus, Søren; Jungersen, Gregers.

    In: Frontiers in Genetics, Vol. 6, 286, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  47. Accepted/In press
  48. Published

    First detection of bonamia ostreae in native flat oysters from the limfjord in denmark. / Madsen, Lone; Thomassen, Helena Elisabeth Hou.

    17th International Conference on Diseases of Fish And Shellfish: Abstract book. Las Palmas : European Association of Fish Pathologists, 2015. p. 92-92 O-084.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  49. Published

    Fishpathogens.eu/noda: a free and handy online platform for Betanodavirus targeted research and data sharing. / Mikkelsen, Susie Sommer; Panzarin, V.; Jonstrup, Søren Peter; Bigarré, L.; Baud, M.; Gray, T.; Agapow, P.‐M.; Olesen, Niels Jørgen.

    In: Journal of Fish Diseases, Vol. 38, No. 8, 2015, p. 755-760.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  50. Published

    Foot-and-Mouth Disease. / Belsham, Graham; Charleston, Bryan; Jackson, Terry; Paton, David J.

    Encyclopedia of Life Sciences. Wiley, 2015.

    Publication: Research - peer-reviewEncyclopedia chapter – Annual report year: 2015

  51. Published

    Foot-and-Mouth Disease Virus Serotype SAT 3 in Long-Horned Ankole Calf, Uganda. / Dhikusooka, Moses Tefula; Tjørnehøj, Kirsten; Ayebazibwe, Chrisostom; Namatovu, Alice; Ruhweza, Simon; Redlef Siegismund, Hans; Wekesa, Sabenzia Nabalayo; Normann, Preben; Belsham, Graham.

    In: Emerging Infectious Diseases (Print Edition), Vol. 21, No. 1, 2015, p. 111-114.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  52. Published
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