Organic Chemistry
- 2013
- Published
Accurate prediction of secondary metabolite gene clusters in filamentous fungi.. / Andersen, Mikael Rørdam; Nielsen, Jakob Blæsbjerg; Klitgaard, Andreas; Petersen, Lene Maj; Zachariasen, Mia; Hansen, Tilde J; Holberg Blicher, Lene; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog; Mortensen, Uffe Hasbro.
In: National Academy of Sciences. Proceedings, Vol. 110, No. 1, 2013, p. E99-E107.Publication: Research - peer-review › Journal article – Annual report year: 2013
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Discovery of a novel selective PPARγ ligand with partial agonist binding properties by integrated in silico / in vitro work flow. / Kouskoumvekaki, Irene; Petersen, Rasmus K.; Fratev, Filip Filipov ; Taboureau, Olivier ; Nielsen, Thomas Eiland; Oprea, Tudor; Sonne, Si Brask; Flindt, Esben N.; Jonsdottir, Svava Osk; Kristiansen, Karsten.
In: Journal of Chemical Information and Modeling, Vol. 53, No. 4, 2013, p. 923-937.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Cis–Trans Amide Bond Rotamers in β-Peptoids and Peptoids: Evaluation of Stereoelectronic : Effects in Backbone and Side Chains. / Laursen, Jonas Striegler; Engel-Andreasen, Jens; Fristrup, Peter; Harris, Pernille; Olsen, Christian Adam.
In: American Chemical Society. Journal, Vol. 135, No. 7, 2013, p. 2835-2844.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Identification of LasR Ligands through a Virtual Screening Approach. / Skovstrup, Søren; Le Quement, Sebastian Thordal; Hansen, Thomas; Jakobsen, Tim Holm; Harmsen, Morten; Tolker‐Nielsen, Tim; Nielsen, Thomas Eiland; Givskov, Michael Christian; Taboureau, Olivier .
In: ChemMedChem, Vol. 8, No. 1, 2013, p. 157-163.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
In vitro growth of four individual human gut bacteria on oligosaccharides produced by chemoenzymatic synthesis.. / Vigsnæs, Louise Kristine; Nakai, Hiroyuki; Hemmingsen, Lene; Andersen, Joakim Mark; Lahtinen, Sampo J; Rasmussen, Louise Enggaard; Abou Hachem, Maher ; Petersen, Bent O.; Duus, Jens Øllgaard; Meyer, Anne S.; Licht, Tine Rask; Svensson, Birte.
In: Food & Function, Vol. 4, No. 5, 2013, p. 784-793.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Mechanistic Investigation of Palladium–Catalyzed Allylic C–H Activation. / Engelin, Casper Junker; Jensen, Thomas; Rodríguez-Rodríguez, Sergio; Fristrup, Peter.
In: A C S Catalysis, Vol. 3, 2013, p. 294-302.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Mechanistic investigation of the one-pot formation of amides by oxidative coupling of alcohols with amines in methanol. / Mielby, Jerrik Jørgen; Riisager, Anders; Fristrup, Peter; Kegnæs, Søren.
In: Catalysis Today, Vol. 203, 2013, p. 211-216.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Stannylene‐Mediated Regioselective 6‐O‐Glycosylation of Unprotected Phenyl 1‐Thioglycopyranosides. / Maggi, Agnese; Madsen, Robert.
In: European Journal of Organic Chemistry, Vol. 2013, No. 13, 2013, p. 2683-2691.Publication: Research › Journal article – Annual report year: 2013
- Published
Synthesis and biological evaluation of triazole-containing N-acyl homoserine lactones as quorum sensing modulators. / Stacy, Danielle M.; Le Quement, Sebastian T.; Hansen, Casper L.; Clausen, Janie W.; Tolker-Nielsen, Tim; Brummond, Jacob W.; Givskov, Michael; Nielsen, Thomas E.; Blackwell, Helen E.
In: Organic & Biomolecular Chemistry, Vol. 11, No. 6, 2013, p. 938-954.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Synthesis of a Backbone Hexasaccharide Fragment of the Pectic Polysaccharide Rhamnogalacturonan I. / Zakharova, Alexandra N.; Madsen, Robert; Clausen, Mads H.
In: Organic Letters, Vol. 15, No. 8, 2013, p. 201826-1829.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Tandem Ring-Closing Metathesis/Isomerization Reactions for the Total Synthesis of Violacein. / Petersen, Mette T.; Nielsen, Thomas E.
In: Organic Letters, Vol. 15, No. 8, 2013, p. 1986-1989.Publication: Research - peer-review › Journal article – Annual report year: 2013
- 2012
- Published
Mapping of secondary metabolites to their synthase genes in Aspergillus species. / Klejnstrup, Marie Louise; Larsen, Thomas Ostenfeld (Main supervisor); Gotfredsen, Charlotte Held (Supervisor); Mortensen, Uffe Hasbro (Supervisor).
Department of Systems Biology, DTU, 2012. 306 p.Publication: Research › Ph.d. thesis – Annual report year: 2013
- Published
Acylierung von Lysinen: Erweiterung des Repertoires. / Olsen, Christian A.
In: Angewandte Chemie, Vol. 124, No. 16, 2012, p. 3817-3819.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
A fluorescent probe which allows highly specific thiol labeling at low pH. / Nielsen, Jonas W.; Jensen, Kristine Steen; Hansen, Rosa E.; Gotfredsen, Charlotte Held; Winther, Jakob R.
In: Analytical Biochemistry, Vol. 421, No. 1, 2012, p. 115-120.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Ajoene, a Sulfur-Rich Molecule from Garlic, Inhibits Genes Controlled by Quorum Sensing. / Jakobsen, Tim Holm; van Gennip, Maria; Phipps, Richard Kerry; Shanmugham, Meenakshi Sundaram; Christensen, Louise Dahl; Alhede, Morten; Skindersoe, Mette Eline; Rasmussen, Thomas Bovbjerg; Friedrich, Karlheinz; Uthe, Friedrich; Jensen, Peter Østrup; Moser, Claus Ernst; Nielsen, Kristian Fog; Eberl, Leo; Larsen, Thomas Ostenfeld; Tanner, David; Høiby, Niels; Bjarnsholt, Thomas; Givskov, Michael.
In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 5, 2012, p. 2314-2325.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Build/Couple/Pair and Multifunctional Catalysis Strategies for the Synthesis of Heterocycles from Simple Starting Materials. / Ascic, Erhad; Nielsen, Thomas Eiland (Supervisor).
Kgs.Lyngby : DTU Chemistry, 2012. 180 p.Publication: Research › Ph.d. thesis – Annual report year: 2012
- Published
Build/Couple/Pair Strategy Combining the Petasis 3-Component Reaction with Ru-Catalyzed Ring-Closing Metathesis and Isomerization. / Ascic, Erhad; Le Quement, Sebastian Thordal; Ishøy, Mette; Daugaard, Mathilde; Nielsen, Thomas Eiland.
In: A C S Combinatorial Science, Vol. 14, No. 4, 2012, p. 253-257.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Carbohydrate Microarrays in Plant Science. / Fangel, Jonatan Ulrik; Pedersen, H.L.; Vidal-Melgosa, S.; Ahl, Louise Isager; Salmean, A.A.; Egelund, Jack; Rydahl, Maja Gro; Clausen, M.H.; Willats, William George Tycho.
In: Methods in Molecular Biology, Vol. 918, 2012, p. 351-362.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Characterization of the AN6448 cluster in Aspergillus nidulans. / Nielsen, Jakob Blæsbjerg; Klejnstrup, Marie Louise; Khorsand-Jamal, Paiman; Holm, Dorte Koefoed; Nielsen, Michael Lynge; Kabat, Anna Monika; Rank, Christian; Gotfredsen, Charlotte Held; Larsen, T. O.; Mortensen, Uffe Hasbro.
In: Planta Medica, Vol. 78, No. 11, 2012, p. 1113-1113.Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012
- Published
Chemical analysis of a genome wide polyketide synthase gene deletion library in Aspergillus nidulans. / Larsen, Thomas Ostenfeld; Klejnstrup, Marie Louise; Nielsen, Jakob Blæsbjerg; Holm, Dorte Koefoed; Petersen, Lene Maj; Klitgaard, Andreas; Nielsen, Kristian Fog; Andersen, Mikael Rørdam; Mortensen, Uffe Hasbro.
2012. Abstract from Directing Biosynthesis III, Nottingham, United Kingdom.Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2012
- Published
Comparative chemistry of Aspergillus oryzae (RIB40) and A. flavus (NRRL 3357). / Rank, Christian; Klejnstrup, Marie Louise; Petersen, Lene Maj; Kildgaard, Sara; Frisvad, Jens Christian; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld.
In: Metabolites, Vol. 2, 2012, p. 39-56.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Dehydrogenative Synthesis of Imines from Alcohols and Amines Catalyzed by a Ruthenium N-Heterocyclic Carbene Complex. / Maggi, Agnese; Madsen, Robert.
In: Organometallics, Vol. 31, No. 1, 2012, p. 451-455.Publication: Research - peer-review › Journal article – Annual report year: 2011
- Published
Discovery of novel secondary metabolites in Aspergillus aculeatus. / Petersen, Lene Maj; Holm, Dorte Koefoed; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld.
In: Planta Medica, Vol. 78, No. 11, 2012, p. 1159-1160.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Disparate SAR Data of Griseofulvin Analogues for the Dermatophytes Trichophyton mentagrophytes, T. rubrum, and MDA-MB-231 Cancer Cells. / Rønnest, Mads Holger; Raab, Marc S.; Anderhub, Simon; Boesen, Sven; Krämer, Alwin; Larsen, Thomas Ostenfeld; Clausen, Mads Hartvig.
In: Journal of Medicinal Chemistry, Vol. 55, No. 2, 2012, p. 652-660.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Elucidation of the biosynthesis of meroterpenoid yanuthone D in Aspergillus Niger. / Holm, Dorte Koefoed; Petersen, Lene Maj; Klitgaard, Andreas; Jarczynska, Zofia Dorota; Larsen, Thomas Ostenfeld; Mortensen, Uffe Hasbro.
In: Planta Medica, Vol. 78, No. 11, 2012, p. 1069-1069.Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012
- Published
Expansion of the Lysine Acylation Landscape : In memory of Jerzy W. Jaroszewski. / Olsen, Christian A.
In: Angewandte Chemie (International Edition), Vol. 51, No. 16, 2012, p. 3755-3756.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Fluorescence-Based Reporter for Gauging Cyclic Di-GMP Levels in Pseudomonas aeruginosa. / Rybtke, Morten T.; Borlee, Bradley R.; Murakami, Keiji; Irie, Yasuhiko; Hentzer, Morten; Nielsen, Thomas Eiland; Givskov, Michael; Parsek, Matthew R.; Tolker-Nielsen, Tim.
In: Applied and Environmental Microbiology, Vol. 78, No. 15, 2012, p. 5060-5069.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Fungal natural products targeting chronic lymphocytic leukemia. / Bladt, Tanja Thorskov; Kildgaard, Sara; Knudsen, Peter Boldsen; Gotfredsen, Charlotte Held; Duerr, C.; Seiffert, M.; Larsen, Thomas Ostenfeld.
In: Planta Medica, Vol. 78, No. 11, 2012, p. 1158-1158.Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012
- Published
Genetics of Polyketide Metabolism in Aspergillus nidulans. / Klejnstrup, Marie L.; Frandsen, Rasmus John Normand; Holm, Dorte Koefoed; Nielsen, Morten Thrane; Mortensen, Uffe Hasbro; Larsen, Thomas Ostenfeld; Nielsen, Jakob Blæsbjerg.
In: Metabolites, Vol. 2, No. 1, 2012, p. 100-133.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
GF-15, a Novel Inhibitor of Centrosomal Clustering, Suppresses Tumor Cell Growth In Vitro and In Vivo. / Raab, Marc S.; Breitkreutz, Iris; Anderhub, Simon; Rønnest, Mads Holger; Leber, Blanka; Larsen, Thomas Ostenfeld; Weiz, Ludmila; Konotop, Gleb; Hayden, Patrick J.; Podar, Klaus; Fruehauf, Johannes; Nissen, Felix; Mier, Walter; Haberkorn, Uwe; Ho, Anthony D.; Goldschmidt, Hartmut; Anderson, Kenneth C.; Clausen, Mads Hartvig; Krämer, Alwin.
In: Cancer Research, Vol. 72, No. 20, 2012, p. 5374-5385.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Gold Nanoparticle-Catalyzed Formation of Nitrogen-containing Compounds-From Mechanistic Understanding to Synthetic Exploitation. / Mielby, Jerrik; Kegnaes, Soren; Fristrup, Peter.
In: ChemCatChem, Vol. 4, No. 8, 2012, p. 1037-1047.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
HDAC Inhibitors without an Active Site Zn2+-Binding Group. / Vickers, Chris J. ; Olsen, Christian Adam; Leman, Luke J. ; Ghadiri, M. Reza.
In: A C S Medicinal Chemistry Letters, Vol. 3, 2012, p. 505−508.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Iridium- and Ruthenium-Catalyzed N-alkylation of Amines with Alcohols and Amines. / Lorentz-Petersen, Linda Luise Reeh; Madsen, Robert (Supervisor).
DTU Chemistry, 2012. 198 p.Publication: Research › Ph.d. thesis – Annual report year: 2012
- Published
Iridium‐Catalyzed Condensation of Amines and Vicinal Diols to Substituted Piperazines. / Lorentz-Petersen, Linda Luise Reeh; Nordstrøm, Lars Ulrik Rubæk; Madsen, Robert.
In: European Journal of Organic Chemistry, Vol. 2012, No. 34, 2012, p. 6752-6759.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Iridium‐Catalyzed Dehydrogenative Decarbonylation of Primary Alcohols with the Liberation of Syngas. / Olsen, Esben Paul Krogh; Madsen, Robert.
In: Chemistry: A European Journal, Vol. 18, No. 50, 2012, p. 16023-16029.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Iridoids from Scutellaria goulimyi Rech. f., Lamiaceae. Morphological and chemical relations with Scutellaria albida L. ssp albida. / Gousiadou, Chrysoula; Gotfredsen, Charlotte Held; Jensen, Søren Rosendal; Tsoukalas, Michail.
In: Biochemical Systematics and Ecology, Vol. 43, 2012, p. 139-141.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Large scale synthesis of 2′-Amino-LNA thymine and 5-methylcytosine nucleosides. / Madsen, Andreas Stahl; Jorgensen, Anna Sondergaard; Jensen, Troels Bundgaard; Wengel, Jesper; Madsen, Andreas Stahl.
In: Journal of Organic Chemistry, Vol. 77, No. 23, 2012, p. 10718-10728.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Macrocyclic Peptoid–Peptide Hybrids as Inhibitors of Class I Histone Deacetylases. / Olsen, Christian Adam; Montero, Ana; Leman, Luke J. ; Ghadiri, M. Reza.
In: A C S Medicinal Chemistry Letters, Vol. 3, 2012, p. 749-753.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Mechanistic investigation of the iridium-catalysed alkylation of amines with alcohols. / Fristrup, Peter; Tursky, Matyas; Madsen, Robert.
In: Organic & Biomolecular Chemistry, Vol. 10, No. 13, 2012, p. 2569-2577.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Accepted
Mechanistic Investigation of the Ruthenium–N-Heterocyclic-Carbene-Catalyzed Amidation of Alcohols and Amines. / Makarov, Ilya; Fristrup, Peter; Madsen, Robert.
In: Chemistry: A European Journal, 2012.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
One-pot synthesis of amides by aerobic oxidative coupling of alcohols or aldehydes with amines using supported gold and base as catalysts. / Kegnæs, Søren; Mielby, Jerrik Jørgen; Mentzel, Uffe Vie; Jensen, Thomas; Fristrup, Peter; Riisager, Anders.
In: Chemical Communications, Vol. 48, No. 18, 2012, p. 2427-2429.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Pectin Biosynthesis: GALS1 in Arabidopsis thaliana Is a β-1,4-Galactan β-1,4-Galactosyltransferase [C][W][OA]. / Liwanag, April Jennifer Madrid; Ebert, Berit; Verhertbruggen, Yves; Rennie, Emilie A.; Rautengarten, Carsten; Oikawa, Ai; Andersen, Mathias Christian Franch; Clausen, Mads Hartvig; Scheller, Henrik.
In: Plant Cell, Vol. 24, No. 12, 2012, p. 205024-5036.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Petasis Three-Component Coupling Reactions of Hydrazides for the Synthesis of Oxadiazolones and Oxazolidinones. / Le Quement, Sebastian Thordal; Flagstad, Thomas; Mikkelsen, Remi Jacob Thomsen; Hansen, Mette Reimert; Givskov, Michael C.; Nielsen, Thomas Eiland.
In: Organic Letters, Vol. 14, No. 2, 2012, p. 640-643.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Process for the Manufacture of Ajoene Derivatives. / Larsen, Thomas Ostenfeld (Inventor); Givskov, Michael Christian (Inventor); Bjarnsholt, Thomas (Inventor); Jakobsen, Tim Holm (Inventor); Christensen, Louise Dahl (Inventor); Shanmugham, Meenakshi Sundaram (Inventor); Phipps, Richard Kerry (Inventor); Tanner, David Ackland (Inventor); Høiby, Niels (Inventor); Jensen, Peter Østrup (Inventor).
IPC No.: A61K31/105. Jun 14, 2012.Publication: Research › Patent – Annual report year: 2012
- Published
Profiling of Substrates for Zinc‐dependent Lysine Deacylase Enzymes: HDAC3 Exhibits Decrotonylase Activity In Vitro. / Madsen, Andreas Stahl; Olsen, Christian Adam.
In: Angewandte Chemie (International Edition), Vol. 51, No. 36, 2012, p. 9083-9087.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Profiling of Substrates for Zinc‐dependent Lysine Deacylase Enzymes: HDAC3 Exhibits Decrotonylase Activity In Vitro. / Madsen, Andreas Stahl; Olsen, Christian Adam.
In: Angewandte Chemie, Vol. 124, No. 36, 2012, p. 9217-9221.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Ruthenium-catalyzed synthesis of amides from alcohols and amines: mechanistic study and application. / Makarov, Ilya; Fristrup, Peter; Madsen, Robert.
2012. Abstract from Challenges in Organic Chemistry and Chemical Biology (ISACS7), Edinburgh, United Kingdom.Publication: Research › Conference abstract for conference – Annual report year: 2012
- Published
Simultaneous determination of iridoid glycosides, phenethylalcohol glycosides and furfural derivatives in Rehmanniae Radix by high performance liquid chromatography coupled with triple-quadrupole mass spectrometry. / Xu, Jun; Wu, Jie; Zhu, Ling-Ying; Shen, Hong; Xu, Jin-Di; Jensen, Søren Rosendal; Jia, Xiao-Bin; Zhang, Qing-Wen; Li, Song-Lin.
In: Food Chemistry, Vol. 135, No. 4, 2012, p. 2277-2286.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Solid-Phase Iminium Cyclization Reactions for the Synthesis of Natural Product-Like Diketopiperazines. / Petersen, Rico; Nielsen, Thomas Eiland (Supervisor).
Kgs.Lyngby : DTU Chemistry, 2012. 212 p.Publication: Research › Ph.d. thesis – Annual report year: 2012
- Published
Solid‐Phase Synthesis of Structurally Diverse Heterocycles by an Amide–Ketone Condensation/N‐Acyliminium Pictet–Spengler Sequence. / Komnatnyy, Vitaly V.; Givskov, Michael Christian; Nielsen, Thomas Eiland.
In: Chemistry: A European Journal, Vol. 18, No. 52, 2012, p. 16793-16800.Publication: Research - peer-review › Journal article – Annual report year: 2012