Novo Nordisk Foundation Center for Biosustainability

  1. 2015
  2. Published
  3. Published

    antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters. / Weber, Tilmann; Blin, Kai; Duddela, Srikanth; Krug, Daniel; Kim, Hyun Uk; Bruccoleri, Robert; Lee, Sang Yup; Fischbach, Michael A.; Müller, Rolf; Wohlleben, Wolfgang.

    In: Nucleic Acids Research, Vol. 43, No. W1, 05.2015, p. W237-W243.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  4. Published

    Ach1 is involved in shuttling mitochondrial acetyl units for cytosolic C2 provision in Saccharomyces cerevisiae lacking pyruvate decarboxylase. / Chen, Yun; Zhang, Yiming; Siewers, Verena; Nielsen, Jens.

    In: F E M S Yeast Research, Vol. 15, No. 3, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. Accepted/In press

    A logical data representation framework for electricity-driven bioproduction processes. / Patil, Sunil A.; Gildemyn, Sylvia; Pant, Deepak; Zengler, Karsten; Logan, Bruce E.; Rabaey, Korneel.

    In: Biotechnology Advances, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  6. Accepted/In press

    A multi-pronged investigation into the effect of glucose starvation and culture duration on fed-batch CHO cell culture. / Fan, Yuzhou; Jimenez Del Val, Ioscani; Müller, Christian; Lund, Anne Mathilde; Wagtberg Sen, Jette; Rasmussen, Søren Kofoed; Kontoravdi, Cleo; Baycin-Hizal, Deniz; Betenbaugh, Michael J.; Weilguny, Dietmar; Andersen, Mikael Rørdam.

    In: Biotechnology and Bioengineering (Print), 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  7. Published
  8. Published

    Applications of computational modeling in metabolic engineering of yeast. / Kerkhoven, Eduard J.; Lahtvee, Petri-Jaan; Nielsen, Jens.

    In: F E M S Yeast Research, Vol. 15, No. 1, 2015, p. 1-13.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  9. Published
  10. Published

    A streamlined ribosome profiling protocol for the characterization of microorganisms. / Latif, Haythem; Szubin, Richard; Tan, Justin; Brunk, Elizabeth; Lechner, Anna; Zengler, Karsten; Palsson, Bernhard O.

    In: BioTechniques, Vol. 58, No. 6, 2015, p. 329-332.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  11. Published

    A systems approach to traditional oriental medicine. / Kim, Hyun Uk; Ryu, Jae Yong; Lee, Jong Ok; Lee, Sang Yup.

    In: Nature Biotechnology, Vol. 33, No. 3, 2015, p. 264-268.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  12. Published

    Biorefineries for the production of top building block chemicals and their derivatives. / Choi, Sol; Song, Chan Woo; Shin, Jae Ho; Lee, Sang Yup.

    In: Metabolic Engineering, Vol. 28, 2015, p. 223-239.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  13. Published

    Bistability in a Metabolic Network Underpins the De Novo Evolution of Colony Switching in Pseudomonas fluorescens. / Gallie, Jenna; Libby, Eric; Bertels, Frederic; Remigi, Philippe; Jendresen, Christian Bille; Ferguson, Gayle C.; Desprat, Nicolas; Buffing, Marieke F.; Sauer, Uwe; Beaumont, Hubertus J. E.; Martinussen, Jan; Kilstrup, Mogens; Rainey, Paul B.

    In: P L o S Biology, Vol. 13, No. 3, e1002109, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  14. E-pub ahead of print
  15. Published

    Co-evolution of strain design methods based on flux balance and elementary mode analysis. / Machado, Daniel; Herrgard, Markus.

    In: Metabolic Engineering Communications, Vol. 2, 2015, p. 85-92.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  16. Published
  17. Published
  18. Published

    Controllability analysis of transcriptional regulatory networks reveals circular control patterns among transcription factors. / Österlund, Tobias; Bordel, Sergio; Nielsen, Jens.

    In: Integrative Biology, Vol. 7, No. 5, 2015, p. 560-568.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  19. Published
  20. Published
  21. E-pub ahead of print

    CRISPR-Cas9 Based Engineering of Actinomycetal Genomes. / Tong, Yaojun; Charusanti, Pep; Zhang, Lixin; Weber, Tilmann; Lee, Sang Yup.

    In: A C S Synthetic Biology, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  22. Published

    CRISPR/Cas9-mediated genome engineering of CHO cell factories: Application and perspectives. / Lee, Jae Seong; Grav, Lise Marie; Lewis, Nathan E.; Kildegaard, Helene Faustrup.

    In: Biotechnology Journal, Vol. 10, No. 7, 2015, p. 979-994.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  23. Published
  24. Published

    CTX-M-1 β-lactamase expression in Escherichia coli is dependent on cefotaxime concentration, growth phase and gene location.. / Kjeldsen, Thea S. B.; Overgaard, Martin; Nielsen, Søren S.; Bortolaia, Valeria; Jelsbak, Lotte; Sommer, Morten Otto Alexander; Guardabassi, Luca; Olsen, John E.

    In: Journal of Antimicrobial Chemotherapy, Vol. 70, No. 1, 2015, p. 62-70.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  25. Published

    Deep sequencing reveals different compositions of mRNA transcribed from the F8 gene in a panel of FVIII-producing CHO cell lines. / Kaas, Christian Schrøder; Bolt, Gert; Hansen, Jens J; Andersen, Mikael Rørdam; Kristensen, Claus.

    In: Biotechnology Journal, Vol. 10, No. 7, 2015, p. 1082-1089.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  26. Published

    Design of homo-organic acid producing strains using multi-objective optimization. / Kim, Tae Yong; Park, Jong Myoung; Kim, Hyun Uk; Cho, Kwang Myung; Lee, Sang Yup.

    In: Metabolic Engineering, Vol. 28, 2015, p. 63-73.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  27. Published

    Development of a VHH-Based Erythropoietin Quantification Assay. / Kol, Stefan; Beuchert Kallehauge, Thomas; Adema, Simon; Hermans, Pim.

    In: Molecular Biotechnology, Vol. 57, No. 8, 2015, p. 692-700.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  28. Published

    Development of biosensors and their application in metabolic engineering. / Zhang, Jie; Jensen, Michael Krogh; Keasling, Jay.

    In: Current Opinion in Chemical Biology, Vol. 28, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  29. Published

    Development of Spatial Distribution Patterns by Biofilm Cells. / Haagensen, Janus Anders Juul; Hansen, Susse Kirkelund; Bak Christensen, Bjarke; Pamp, Sünje Johanna; Molin, Søren.

    In: Applied and Environmental Microbiology, Vol. 81, No. 18, 2015, p. 6120-6128.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  30. Published

    Diversity of small RNAs expressed in Pseudomonas species. / Gomez-Lozano, Mara; Marvig, Rasmus Lykke; Molina-Santiago, Carlos; Tribelli, Paula Maria; Ramos, Juan-Luis; Molin, Søren.

    In: Environmental Microbiology Reports, Vol. 7, No. 2, 2015, p. 227-236.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  31. Published

    Electrifying microbes for the production of chemicals. / Tremblay, Pier-Luc; Zhang, Tian.

    In: Frontiers in Microbiology, Vol. 6, 201, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  32. Published

    Electrochemical detection of pyocyanin as a biomarker for bacterial infections. / Al Atraktchi, Fatima Al-Zahraa; Svendsen, Winnie Edith; Breum Andersen, Sandra; Molin, Søren; Johansen, Helle Krogh.

    2015. Poster session presented at 25th European Society of Clinical Microbiology and Infectious Diseases, Copenhagen, Denmark.

    Publication: ResearchPoster – Annual report year: 2015

  33. Published

    Engineering the oxygen sensing regulation results in an enhanced recombinant human hemoglobin production by Saccharomyces cerevisiae. / Martínez, José L.; Liu, Lifang; Petranovic, Dina; Nielsen, Jens.

    In: Biotechnology and Bioengineering, Vol. 112, No. 1, 2015, p. 181–188.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  34. Published

    Enhanced amino acid utilization sustains growth of cells lacking Snf1/AMPK. / Nicastro, Raffaele; Tripodi, Farida; Guzzi, Cinzia; Reghellin, Veronica; Khoomrung, Sakda; Capusoni, Claudia; Compagno, Concetta; Airoldi, Cristina; Nielsen, Jens; Alberghina, Lilia; Coccetti, Paola.

    In: B B A - Molecular Cell Research, Vol. 1853, No. 7, 2015, p. 1615-1625.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  35. E-pub ahead of print

    Enhanced Protein Production in Escherichia coli by Optimization of Cloning Scars at the Vector-Coding Sequence Junction. / Mirzadeh, Kiavash; Martinez, Virginia; Toddo, Stephen; Guntur, Suchithra; Herrgard, Markus; Elofsson, Arne; Nørholm, Morten; Daley, Daniel O.

    In: A C S Synthetic Biology, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  36. Published

    Evolutionary insight from whole-genome sequencing of Pseudomonas aeruginosa from cystic fibrosis patients. / Marvig, Rasmus Lykke; Madsen Sommer, Lea Mette; Jelsbak, Lars; Molin, Søren; Johansen, Helle Krogh.

    In: Future Microbiology, Vol. 10, No. 4, 2015, p. 599-611.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  37. Published

    Extended spectrum beta-lactamase-producing Escherichia coli forms filaments as an initial response to cefotaxime treatment. / Kjeldsen, Thea S. B.; Sommer, Morten Otto Alexander; Olsen, John E.

    In: B M C Microbiology, Vol. 15, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  38. Published

    Fast and sensitive detection of indels induced by precise gene targeting. / Yang, Zhang; Steentoft, Catharina; Hauge, Camilla; Hansen, Lars; Thomsen, Allan Lind; Niola, Francesco; Vester-Christensen, Malene Bech; Frödin, Morten; Clausen, Henrik; Wandall, Hans H.; Bennett, Eric P.

    In: Nucleic Acids Research, Vol. 43, No. 9, e59, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  39. Published

    Fast Swinnex Filtration (FSF): A fast and robust sampling and extraction method suitable for metabolomics analysis of cultures grown in complex media. / McCloskey, Douglas; Utrilla, Jose; Naviaux, Robert K.; Palsson, Bernhard O.; Feist, Adam.

    In: Metabolomics, Vol. 11, No. 1, 2015, p. 198-209.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  40. Published

    Genome mining reveals unlocked bioactive potential of marine Gram-negative bacteria. / Machado, Henrique; Sonnenschein, Eva; Melchiorsen, Jette; Gram, Lone.

    In: B M C Genomics, Vol. 16, 158, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  41. E-pub ahead of print

    Glycoengineering of Chinese hamster ovary cells for enhanced erythropoietin N-glycan branching and sialylation. / Yin, Bojiao; Gao, Yuan; Chung, Cheng-yu; Yang, Shuang; Blake, Emily; C. Stuczynski, Mark; Tang, Juechun; Kildegaard, Helene Faustrup; Andersen, Mikael Rørdam; Zhang, Hui; Betenbaugh, Michael J.

    In: Biotechnology and Bioengineering (Print), 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  42. Accepted/In press
  43. Published
  44. Published

    How to set up collaborations between academia and industrial biotech companies. / Pronk, Jack T.; Lee, Sang Yup; Lievense, Jeff; Pierce, John; Palsson, Bernhard; Uhlén, Mathias; Nielsen, Jens.

    In: Nature Biotechnology, Vol. 33, No. 3, 2015, p. 237-240.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  45. Accepted/In press

    Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals. / Jullesson, David; David, Florian; Pfleger, Brian; Nielsen, Jens.

    In: Biotechnology Advances, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  46. Published

    LC-MS analysis reveals the presence of graminan- and neo-type fructans in wheat grains. / Verspreet, Joran; Hansen, Anders Holmgaard; Dornez, Emmie; Delcour, Jan A.; Van den Ende, Wim; Harrison, Scott James; Courtin, Christophe M.

    In: Journal of Cereal Science, Vol. 61, 2015, p. 133-138.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  47. Published
  48. Published

    Methods for modeling chinese hamster ovary (cho) cell metabolism.. / Herrgard, Markus (Inventor); Pedersen, Lasse Ebdrup (Inventor); Lewis, Nathan S. (Inventor); Bruntse, Anders Bech (Inventor).

    IPC No.: C12N5/07. Patent No.: WO2015010088. Jul 19, 2013.

    Publication: ResearchPatent – Annual report year: 2015

  49. Published

    Model-driven discovery of underground metabolic functions in Escherichia coli. / Guzmán, Gabriela I.; Utrilla, José; Nurk, Sergey; Brunk, Elizabeth; Monk, Jonathan M.; Ebrahim, Ali; Palsson, Bernhard O.; Feist, Adam M.

    In: Proceedings of the National Academy of Sciences, Vol. 112, No. 3, 2015, p. 929-934.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  50. Accepted/In press
  51. Published

    Multi-omic profiling of EPO-producing CHO cell panel reveals metabolic adaptation to heterologous protein production. / Ley, Daniel; Kazemi Seresht, Ali; Engmark, Mikael; Magdenoska, Olivera; Nielsen, Kristian Fog; Kildegaard, Helene Faustrup; Andersen, Mikael Rørdam.

    2015. Poster session presented at 24th ESACT meeting, Barcelona, Spain.

    Publication: Research - peer-reviewPoster – Annual report year: 2015

  52. Published
  53. Published

    Multi-scale exploration of the technical, economic, and environmental dimensions of bio-based chemical production. / Zhuang, Kai; Herrgard, Markus.

    In: Metabolic Engineering, Vol. 31, 2015, p. 1-12.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  54. Published

    Multispot array combined with S1 nuclease-mediated elimination of unpaired nucleotides. / Yoo, Seung Min; Kim, Dong Min; Lee, Sang Yup.

    In: BioChip Journal, Vol. 9, No. 2, 2015, p. 156-163.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  55. Published

    New paradigms for metabolic modeling of human cells. / Mardinoglu, Adil; Nielsen, Jens.

    In: Current Opinion in Biotechnology, Vol. 34, 2015, p. 91-97.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  56. Published

    Next-generation genome-scale models for metabolic engineering. / King, Zachary A.; Lloyd, Colton J.; Feist, Adam M.; Palsson, Bernhard O.

    In: Current Opinion in Biotechnology, Vol. 35, 2015, p. 23-29.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  57. Published

    N-Glycosylation optimization of recombinant antibodies in CHO cell through process and metabolic engineering. / Fan, Yuzhou; Andersen, Mikael Rørdam (Supervisor); Weilguny, Dietmar (Supervisor).

    Kgs. Lyngby : Department of Systems Biology, DTU, 2015. 158 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2015

  58. E-pub ahead of print
  59. Published

    Pharmacogenomic and clinical data link non-pharmacokinetic metabolic dysregulation to drug side effect pathogenesis. / Zielinski, Daniel C.; Filipp, F. V.; Bordbar, A.; Jensen, K.; Smith, J. W.; Herrgard, Markus; Mo, Monica L.; Palsson, B. O.

    In: Nature Communications, No. 6, 7101, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  60. Published

    Production of β-ionone by combined expression of carotenogenic and plant CCD1 genes in Saccharomyces cerevisiae. / Lopez, Javiera; Essus, Karen; Kim, Il-Kwon; Pereira, Rui; Herzog, Jan; Siewers, Verena; Nielsen, Jens; Agosin, Eduardo.

    In: Microbial Cell Factories, Vol. 14, No. 84, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  61. Published

    Simultaneous sinus and lung infections in patients with primary ciliary dyskinesia. / Alanin, Mikkel Christian; Johansen, Helle Krogh; Aanaes, Kasper; Høiby, Niels; Pressler, Tanja; Skov, Marianne; Nielsen, Kim Gjerum; Von Buchwald, Christian.

    In: Acta Oto-Laryngologica, Vol. 135, No. 1, 2015, p. 58-63.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  62. Published
  63. Published

    Solid-phase cloning for high-throughput assembly of single and multiple DNA parts. / Lundqvist, Magnus; Edfors, Fredrik; Sivertsson, Åsa; Hallström, Björn M.; Hudson, Elton P.; Tegel, Hanna; Holmberg, Anders; Uhlén, Mathias; Rockberg, Johan.

    In: Nucleic Acids Research, Vol. 43, No. 7, 20e49-e49, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  64. Published

    Synergistic combinations of antifungals and antivirulence agents to fight against Candida albicans. / Cui, Jinhui; Ren, Biao; Tong, Yaojun; Dai, Huanqin; Zhang, Lixin.

    In: Virulence, Vol. 6, No. 4, 2015, p. 362-371.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  65. Published

    The architecture of ArgR-DNA complexes at the genome-scale in Escherichia coli. / Cho, Suhyung; Cho, Yoo-Bok; Kang, Taek Jin; Kim, Sun Chang; Palsson, Bernhard; Cho, Byung-Kwan.

    In: Nucleic Acids Research, Vol. 43, No. 6, 2015, p. 3079-3088.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  66. Published

    The effect of short-term, high-dose oral N-acetylcysteine treatment on oxidative stress markers in cystic fibrosis patients with chronic P-aeruginosa infection - A pilot study. / Skov, Marianne; Pressler, Tacjana; Lykkesfeldt, Jens; Poulsen, Henrik Enghusen; Jensen, Peter Ostrup; Johansen, Helle Krogh; Qvist, Tavs; Kraemer, Dorthe; Hoiby, Niels; Ciofu, Oana.

    In: Journal of Cystic Fibrosis, Vol. 14, No. 2, 2015, p. 211-218.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  67. Published

    The fur Gene as a New Phylogenetic Marker for Vibrionaceae Species Identification. / Machado, Henrique; Gram, Lone.

    In: Applied and Environmental Microbiology, Vol. 81, No. 8, 2015, p. 2745-2752.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  68. Published

    The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone National Park. / Becraft, Eric D.; Wood, Jason M.; Rusch, Douglas B.; Kühl, Michael; Ingemann Jensen, Sheila; Bryant, Donald A.; Roberts, David W.; Cohan, Frederick M.; Ward, David M.

    In: Frontiers in Microbiology, Vol. 6, 590, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  69. Published

    Tissue-based map of the human proteome.. / Uhlén, Mathias; Fagerberg, Linn; Hallström, Björn M.; Lindskog, Cecilia; Oksvold, Per; Mardinoglu, Adil; Sivertsson, Åsa; Kampf, Caroline; Sjöstedt, Evelina; Asplund, Anna; Olsson, IngMarie; Edlund, Karolina; Lundberg, Emma; Navani, Sanjay; Szigyarto, Cristina Al-Khalili; Odeberg, Jacob; Djureinovic, Dijana; Takanen, Jenny Ottosson; Hober, Sophia; Alm, Tove; Edqvist, Per-Henrik; Berling, Holger; Tegel, Hanna; Mulder, Jan; Rockberg, Johan; Nilsson, Peter; Schwenk, Jochen M.; Hamsten, Marica; von Feilitzen, Kalle; Forsberg, Mattias; Persson, Lukas; Johansson, Fredric; Zwahlen, Martin; von Heijne, Gunnar; Nielsen, Jens; Pontén, Fredrik.

    In: Science (New York, N.Y.), Vol. 347, No. 6220, 1260419, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  70. Published

    Triton X-114 cloud point extraction to subfractionate blood plasma proteins for two-dimensional gel electrophoresis. / Jessen, Flemming; Wulff, Tune.

    In: Analytical Biochemistry, Vol. 485, 2015, p. 11-17.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  71. Published

    Use of Adaptive Laboratory Evolution To Discover Key Mutations Enabling Rapid Growth of Escherichia coli K-12 MG1655 on Glucose Minimal Medium. / LaCroix, Ryan A.; Sandberg, Troy E.; O'Brien, Edward J.; Utrilla, Jose; Ebrahim, Ali; Guzman, Gabriela I.; Szubin, Richard; Palsson, Bernhard; Feist, Adam.

    In: Applied and Environmental Microbiology, Vol. 81, No. 1, 2015, p. 2017-30.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  72. Published

    Using Genome-scale Models to Predict Biological Capabilities. / O’Brien, Edward J.; Monk, Jonathan M.; Palsson, Bernhard O.

    In: Cell, Vol. 161, No. 5, 2015, p. 971-987.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  73. 2014
  74. Published

    3HP tolerance. / Kildegaard, Kanchana Rueksomtawin (Inventor); Borodina, Irina (Inventor); Förster, Jochen (Inventor); Nielsen, Jens (Inventor).

    IPC No.: C12N9/00; C12N9/02; C12N9/04; C12P7/42; C12P7/52. Patent No.: WO2014198841. Dec 18, 2014.

    Publication: ResearchPatent – Annual report year: 2014

  75. Published
  76. Published

    A compendium of genetic variant data. / Cardoso, Joao; Schöning, Lars Yannik; Herrgard, Markus; Sonnenschein, Nikolaus.

    Abstract Book - DTU Sustain Conference 2014. Kgs. Lyngby : Technical University of Denmark, 2014.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2014

  77. Published

    A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana.. / Lindemose, Søren; Jensen, Michael Krogh; de Velde, Jan Van; O'Shea, Charlotte; Heyndrickx, Ken S.; Workman, Christopher; Vandepoele, Klaas; Skriver, Karen; De Masi, Federico.

    In: Nucleic Acids Research, Vol. 42, No. 12, 2014, p. 7681-7693.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  78. Published

    Advances in metabolic engineering of yeast Saccharomyces cerevisiae for production of chemicals. / Borodina, Irina; Nielsen, Jens.

    In: Biotechnology Journal, Vol. 9, No. 5, 2014, p. 609-620.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  79. Published

    Ageing of atrazine in manure amended soils assessed by bioavailability to Pseudomonas sp. strain ADP. / Glæsner, Nadia; Bælum, Jacob; Strobel, Bjarne W.; Jacobsen, Carsten S.

    In: Biodegradation, Vol. 25, No. 2, 2014, p. 217-225.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  80. Published

    A kinetic model of thiamine biosynthesis in Escherichia coli. / Matos, Marta; Herrgard, Markus; Andersen, Mikael Rørdam; Sonnenschein, Nikolaus.

    Abstract Book - DTU Sustain Conference 2014. Kgs. Lyngby : Technical University of Denmark, 2014.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2014

  81. Published

    A model‐driven quantitative metabolomics analysis of aerobic and anaerobic metabolism in E. coli K‐12 MG1655 that is biochemically and thermodynamically consistent. / McCloskey, Douglas; Gangoiti, Jon A.; King, Zachary A.; Naviaux, Robert K.; Barshop, Bruce A.; Palsson, Bernhard; Feist, Adam.

    In: Biotechnology and Bioengineering, Vol. 111, No. 4, 2014, p. 803-815.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  82. Published

    A new high-throughput LC-MS method for the analysis of complex fructan mixtures.. / Verspreet, Joran; Hansen, Anders Holmgaard; Dornez, Emmie; Courtin, Christophe M.; Harrison, Scott James.

    In: Analytical and Bioanalytical Chemistry, Vol. 406, No. 19, 2014, p. 4785-4788.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  83. Published

    An integrated catalog of reference genes in the human gut microbiome. / Li, Junhua; Jia, Huijue; Cai, Xianghang; Zhong, Huanzi; Feng, Qiang; Sunagawa, Shinichi; Arumugam, Manimozhiyan; Kultima, Jens Roat; Prifti, Edi; Nielsen, Trine; Juncker, Agnieszka; Nielsen, Henrik Bjørn; Brunak, Søren.

    In: Nature Biotechnology, Vol. 32, No. 8, 2014, p. 834-841.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  84. Published

    Antibiofilm Properties of Acetic Acid. / Bjarnsholt, Thomas; Alhede, Morten; Jensen, Peter Østrup; Nielsen, Anne K.; Johansen, Helle Krogh; Homøe, Preben; Høiby, Niels; Givskov, Michael Christian; Kirketerp-Møller, Klaus.

    In: Advances in Wound Care, Vol. 4, No. 7, 2014, p. 363-372.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  85. Published

    Application of a controllable degron strategy for metabolic engineering. / Knuf, Christoph; Maury, Jerome; Jacobsen, Simo Abdessamad; Forster, Jochen.

    In: New Biotechnology, Vol. 31, 2014, p. S163.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2014

  86. Published

    Application of synthetic biology for production of chemicals in yeast Saccharomyces cerevisiae. / Borodina, Irina; Li, Mingji.

    In: F E M S Yeast Research, Vol. 15, No. 1, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  87. Published
  88. Published

    A sustainable route to produce the scytonemin precursor using Escherichia coli. / Malla, Sailesh; Sommer, Morten O. A.

    In: Green Chemistry, Vol. 16, No. 6, 2014, p. 3255-3265.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  89. Published
  90. Published

    Bacterial diversity in snow on North Pole ice floes. / Hauptmann, Aviaja Zenia Edna Lyberth; Stibal, Marek ; Bælum, Jacob; Sicheritz-Pontén, Thomas; Brunak, Søren; Bowman, Jeff S.; Hansen, Lars H. ; Jacobsen, Carsten S.; Blom, Nikolaj.

    In: Extremophiles, Vol. 18, 2014, p. 945-951.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  91. Published

    Balanced globin protein expression and heme biosynthesis improve production of human hemoglobin in Saccharomyces cerevisiae. / Liu, Lifang; Martínez, José L.; Liu, Zihe; Petranovic, Dina; Nielsen, Jens.

    In: Metabolic Engineering, Vol. 21, 2014, p. 9-16.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  92. Published

    Bioelectrochemical reduction of carbon dioxide by pure culture at the cathode. / Aryal, Nabin; Tremblay, Pier-Luc; Chen, Leifeng; Höglund, Daniel; Zhang, Tian.

    Abstract Book - DTU Sustain Conference 2014. Kgs. Lyngby : Technical University of Denmark, 2014.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2014

  93. Published

    Biofuels. Altered sterol composition renders yeast thermotolerant.. / Caspeta, Luis; Chen, Yun; Ghiaci, Payam; Feizi, Amir; Buskov, Steen; Hallström, Björn M.; Petranovic, Dina; Nielsen, Jens.

    In: Science, Vol. 346, No. 6205, 2014, p. 75-78.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  94. Published

    Biopharmaceutical protein production bySaccharomyces cerevisiae: current state and future prospects. / Huang, Mingtao; Bao, Jichen; Nielsen, Jens.

    In: Pharmaceutical Bioprocessing, Vol. 2, No. 2, 2014, p. 167-182.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  95. Published

    BioREFINE-2G project – Engineering of industrial yeast strains for production of dicarboxylic acids from side and waste streams. / Stovicek, Vratislav; Chen, Xiao; Borodina, Irina; Förster, Jochen.

    Abstract Book - DTU Sustain Conference 2014. Kgs. Lyngby : Technical University of Denmark, 2014.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2014

  96. Published

    Biosynthesis of Phenylnannolone A, a Multidrug Resistance Reversal Agent from the Halotolerant Myxobacterium Nannocystis pusilla B150. / Bouhired, Sarah M.; Crüsemann, Max; Almeida, Celso; Weber, Tilmann; Piel, Jörn; Schäberle, Till F.; König, Gabriele M.

    In: ChemBioChem, Vol. 15, No. 5, 2014, p. 757-765.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  97. Published

    Biotechnology for renewable chemicals. / Borodina, Irina; Kildegaard, Kanchana Rueksomtawin; Jensen, Niels Bjerg; Sherstyk, Svetlana; Maury, Jerome; Forster, Jochen; Herrgard, Markus; Nielsen, Jens.

    Abstract Book - DTU Sustain Conference 2014. Kgs. Lyngby : Technical University of Denmark, 2014.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2014

  98. Published

    Characterization of Binding Epitopes of CA125 Monoclonal Antibodies. / Marcos-Silva, Lara; Narimatsu, Yoshiki; Halim, Adnan; Campos, Diana; Zhang, Yang; Tarp, Mads A.; Pereira, Pedro J. B.; Mandel, Ulla; Bennett, Eric P.; Valchrushev, Sergey Y.; Levery, Steven B.; David, Leonor; Clausen, Henrik.

    In: Journal of Proteome Research, Vol. 13, No. 7, 2014, p. 3349-3359.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  99. Published

    Coexistence and Within-Host Evolution of Diversified Lineages of Hypermutable Pseudomonas aeruginosa in Long-term Cystic Fibrosis Infections. / Feliziani, Sofia; Marvig, Rasmus Lykke; Lujan, Adela M.; Moyano, Alejandro J.; Di Rienzo, Julio A.; Johansen, Helle Krogh; Molin, Søren; Smania, Andrea M.

    In: P L o S Genetics, Vol. 10, No. 10, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  100. Published

    Cofactory: Sequence-based prediction of cofactor specificity of Rossmann folds. / Geertz-Hansen, Henrik Marcus; Blom, Nikolaj; Feist, Adam; Brunak, Søren; Petersen, Thomas Nordahl.

    In: Proteins, Vol. 82, No. 9, 2014, p. 1819-1828.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  101. Published

    Combinatorial Strategies for Improving Multiple-Stress Resistance in Industrially Relevant Escherichia coli Strains.. / Lennen, Rebecca; Herrgard, Markus.

    In: Applied and Environmental Microbiology, Vol. 80, No. 19, 2014, p. 6223-6242.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  102. Published

    Comparing Whole-Genome Sequencing with Sanger Sequencing for spa Typing of Methicillin-Resistant Staphylococcus aureus. / Bartels, Mette Damkjaer; Petersen, Andreas; Worning, Peder; Nielsen, Jesper Boye; Larner-Svensson, Hanna; Johansen, Helle Krogh; Andersen, Leif Percival; Jarlov, Jens Otto; Boye, Kit; Larsen, Anders Rhod; Westh, Henrik.

    In: European Journal of Clinical Microbiology & Infectious Diseases, Vol. 52, No. 12, 2014, p. 4305-4308.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

Previous 1 2 3 4 Next
Download list:
Download as PDF
Select render style:
APAAuthorCBE/CSEHarvardMLAStandardVancouverShortLong
PDF
Download as HTML
Select render style:
APAAuthorCBE/CSEHarvardMLAStandardVancouverShortLong
HTML
Download as Word
Select render style:
APAAuthorCBE/CSEHarvardMLAStandardVancouverShortLong
Word